Os04g0599800

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Revision as of 11:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0599800| Description = WD40-like domain containing protein| Version = NM_001060289.1 GI:115460307 GeneID:4336870| Length = 2875 bp| Defini...")
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Gene Name

Os04g0599800

Description

WD40-like domain containing protein

Version

NM_001060289.1 GI:115460307 GeneID:4336870

Length

2875 bp

Definition

Oryza sativa Japonica Group Os04g0599800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30666351..30669225

Sequence Coding Region

30666910..30667050,30667137..30667409,30667536..30667805,30667901..30668731

Expression

GEO Profiles:Os04g0599800

Genome Context

<gbrowseImage1> name=NC_008397:30666351..30669225 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30666351..30669225 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgcaggttcgcactcgatctcatcggagaagagcagccggtacgtggcgccgcgacagccactccaggaggccggatccagaccgtacatgccatcgctgagcacggcgtcccgcaacccgtcagccaagtgctacggtgacaggtttattccggacaggtcggcgatggacatggacatggcgcactacctgctgacggagccgaggaaggacaaggagaacgcggcggcgtccccggccaaggaggcgtaccggaagctgctggccgagaagatcctcaacaaccgcaccaggattctctccttccgcaacaagccgccagagcccgagagcatcctcacggagctccgtgctgatgcggcttccatccaagccaagccggcgaagcagcgccgatacattcctcagtctgccgagaggactctggatgctccagagcttgttgatgattactacctcaacctactggactggggaagcagcaatgtgctatccattgcgctgggcaactcggtgtacctctgggatgccacgaacagttcaacttctgagcttgttaccgtcgatgaggacaatggccctgtcaccagcgtaagctgggctcctgatggccggcacatcgccgttggtctcaactcctccgatgtccagctctgggacaccagctcaaaccgactgctgaggacgatgcgaggcgtgcacgattcgagggtcggttcgctggcatggaacaacaacatcctcacaactggtggaatggatggcaagattgtgaacaatgatgtgaggatcaggaaccatgttgtgcagacataccaggggcatcagcaggaggtgtgtggcctcaagtggtcaggatcagggcagcagcttgccagtggtggcaatgacaacctcctgcacatatgggatgtgtccatggcatcctctatgccgtctgctggccgcacccagtggttacacaggcttgaggatcacttggctgctgtgaaggctctcgcgtggtgcccattccagagcaacctgctggcatctggtggtggtgggagtgaccggtgcatcaagttctggaacacacataccggcgcatgcctcaactcgatcgacactgggtcacaagtgtgctcgctggtctggaacaagaatgagagagagctgctaagctcacatggattcgctcagaatcagctcactttgtggaagtacccgtcaatggttaagatggctgaactcactggccatacctctcgtgtccttttcacggctcaggttatcttttgctccttgtacctgccgtttaaattgacaaatattgctctgaacagattgctgattacttgtcttgtggtaatcttgcagagccctgatggtctcacagtagcatctgctgcagcagatgagaccctgagattctggaacgtatttggggctcctgaagcacccaagactgcaaccaagggttcccacactgggatgttcaacaattccaaccacattcacatccgttga</cdnaseq>

Protein Sequence

<aaseq>MDAGSHSISSEKSSRYVAPRQPLQEAGSRPYMPSLSTASRNPSA KCYGDRFIPDRSAMDMDMAHYLLTEPRKDKENAAASPAKEAYRKLLAEKILNNRTRIL SFRNKPPEPESILTELRADAASIQAKPAKQRRYIPQSAERTLDAPELVDDYYLNLLDW GSSNVLSIALGNSVYLWDATNSSTSELVTVDEDNGPVTSVSWAPDGRHIAVGLNSSDV QLWDTSSNRLLRTMRGVHDSRVGSLAWNNNILTTGGMDGKIVNNDVRIRNHVVQTYQG HQQEVCGLKWSGSGQQLASGGNDNLLHIWDVSMASSMPSAGRTQWLHRLEDHLAAVKA LAWCPFQSNLLASGGGGSDRCIKFWNTHTGACLNSIDTGSQVCSLVWNKNERELLSSH GFAQNQLTLWKYPSMVKMAELTGHTSRVLFTAQVIFCSLYLPFKLTNIALNRLLITCL VVILQSPDGLTVASAAADETLRFWNVFGAPEAPKTATKGSHTGMFNNSNHIHIR</aaseq>

Gene Sequence

<dnaseqindica>560..700#787..1059#1186..1455#1551..2381#acaaggatactactccgcgaggcacctctctctctctctctgtgagtttcgtgcgatctcgcgagcgaatccggcgcgcgacccaggctctccaagatccccgcgctctcctcttcggtttactgatctgaaatctctgcgtcgaatcacctgtttgttggcttgaattgcttgtccgcgtcgttgatttcgttgtggtttcttgatcttcggtggaatttctttgcgttggattgtctccacccctgttggtttcttgtcgattcccgatttgagttgttcgttggcgtgaaaaggattctttttttcccctgagatttcttgatttttggtgaaatttctttggtgttgaaatatcatcgccttttggtttcttatcgattccgtcgttccgattggagttgttcgtcggcgtgaatttttttttcctgattcatcgttgcttgttgattggggatcgaatttttcgtctacgatccatcttattcgtggtagcagtatctcttcttgttgctgcgctgtgccctgtttatttgtttctgcttgttgcttctgacccatggatgcaggttcgcactcgatctcatcggagaagagcagccggtacgtggcgccgcgacagccactccaggaggccggatccagaccgtacatgccatcgctgagcacggcgtcccgcaacccgtcagccaagtgctacgtgagttctctgttctaagcgtcgccaaggaacgcacacaagctgttcgacgaaatgactgaacgggtattctccttgtttggcagggtgacaggtttattccggacaggtcggcgatggacatggacatggcgcactacctgctgacggagccgaggaaggacaaggagaacgcggcggcgtccccggccaaggaggcgtaccggaagctgctggccgagaagatcctcaacaaccgcaccaggattctctccttccgcaacaagccgccagagcccgagagcatcctcacggagctccgtgctgatgcggcttccatccaagccaagccggcgaagcagcgccgatacattcctcaggtatgcacacctggttctagtctagtgttcattgctgccatttagctgtaactgtctagtgcctttggattatggttggttgctgattgcctgattggatgtgcgctggttgaaaatcttgtgcagtctgccgagaggactctggatgctccagagcttgttgatgattactacctcaacctactggactggggaagcagcaatgtgctatccattgcgctgggcaactcggtgtacctctgggatgccacgaacagttcaacttctgagcttgttaccgtcgatgaggacaatggccctgtcaccagcgtaagctgggctcctgatggccggcacatcgccgttggtctcaactcctccgatgtccagctctgggacaccagctcaaaccgactggttagtacttagtacctcttggtctgtgtttgaatgttttcattagcattgcatgtgcagttgtgcttagttcctgattgtgattgattctgcagctgaggacgatgcgaggcgtgcacgattcgagggtcggttcgctggcatggaacaacaacatcctcacaactggtggaatggatggcaagattgtgaacaatgatgtgaggatcaggaaccatgttgtgcagacataccaggggcatcagcaggaggtgtgtggcctcaagtggtcaggatcagggcagcagcttgccagtggtggcaatgacaacctcctgcacatatgggatgtgtccatggcatcctctatgccgtctgctggccgcacccagtggttacacaggcttgaggatcacttggctgctgtgaaggctctcgcgtggtgcccattccagagcaacctgctggcatctggtggtggtgggagtgaccggtgcatcaagttctggaacacacataccggcgcatgcctcaactcgatcgacactgggtcacaagtgtgctcgctggtctggaacaagaatgagagagagctgctaagctcacatggattcgctcagaatcagctcactttgtggaagtacccgtcaatggttaagatggctgaactcactggccatacctctcgtgtccttttcacggctcaggttatcttttgctccttgtacctgccgtttaaattgacaaatattgctctgaacagattgctgattacttgtcttgtggtaatcttgcagagccctgatggtctcacagtagcatctgctgcagcagatgagaccctgagattctggaacgtatttggggctcctgaagcacccaagactgcaaccaagggttcccacactgggatgttcaacaattccaaccacattcacatccgttgaggaacacagtaagtactaccttcatctgtatttccctagcgcttctacacattacacagtatcaatgtgatgtccaaaagctgcatgcatatctattaactacaagtagctcattgtgctgttttgctctatgcatctttgcagatacccttggttctgtgatccagtcataacttacaaagaagcagacttggtgtgaagggtcatttgcaggagagatcatcttacattattagcagaagagttagattttgacatgttgtatataaggttttgtgctatgttgataacaattttatgtacatcaagaccggtttgatgtattgattggcgtagaaaaaatgtaaaaaaattgcttttctgccagtaatatacatttttatatacttgccaggcttttcttgtagtaagttcctctcgttgtgtagtaacttgtaatttgattgattttactctcgagccaattgagatgtctggtaaccaggaaattgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0599800, RefSeq:Os04g0599800