Os04g0599900

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Revision as of 11:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0599900| Description = Similar to ENTH1 protein (Fragment)| Version = NM_001060290.1 GI:115460309 GeneID:4336871| Length = 5030 bp| Defini...")
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Gene Name

Os04g0599900

Description

Similar to ENTH1 protein (Fragment)

Version

NM_001060290.1 GI:115460309 GeneID:4336871

Length

5030 bp

Definition

Oryza sativa Japonica Group Os04g0599900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30669771..30674800

Sequence Coding Region

30670065..30670105,30670227..30670278,30670925..30671004,30671436..30671514,30671686..30671769
,30671873..30672018,30672125..30672343,30672697..30672788,30673194..30673384
,30673617..30674223,30674328..30674521

Expression

GEO Profiles:Os04g0599900

Genome Context

<gbrowseImage1> name=NC_008397:30669771..30674800 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30669771..30674800 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatttcgtgaaggttttcgatcaggccgtgcgggagataaagagggaggtcaatttgaaggtgctcaaggttccagagctcgaacagaaggtacttgatgcaacaagcgatgaaccttggggccctcatggtactactctttcagagctatcacatgccaccaagaagttcgctgaatgtcagatggtaatgagtgtcctctggactaggctgtctgagcgaggctcgaaatggcgtcacgtgtataaggctttgacaattattgagtacttaatagccaatggttctgagcgggcagttgatgacattcttgatcactattcaaagatctcggttctttcaagttttgaatatgtggaacctaatggaaaagatgctggaataaatgtgagaaagaaagtcgaaactatattgggactcataaatgacaaggagaaaataaagtctgtaagagagaaagccgccagtaatcgtgacaagtatgttgggctatcatcgacagggataacatataagtcaagctctgcttcatttggtagcaactatagttctggtgaacgttatgggagttttagtggtacaagggaaggtgattcatacggtgacagttatagggataaagaacctgttaaatcctctccaagttatactggcagccagaaatctggcagcaggataaaaaaggatgtgaatagaaggaatgaggattcaccgagctccttgaagtctaatgcaaaaggcaatgaggacgattttgatgattttgatcctcgtggatcttcttcaaatggtgcagctaatacaaacaccagtggcgtggatctttttgccccaaacttattggatgatttcatcgatgtgcctgcagcagcaactcatgaaacaaacgactctgcagacgctcaggttgatctgtttgctgatgcagatttccaatcagcaataccaagtacagaaacagctgcgggttcagatgtccagggcaatgtagacctttttgcggaacagccagccttcacagcagcctttccaccacagacagggtttattccaccaccaagttctgggacatctgaagcaaatacttccacgtctaagaacacaactcctgaaccttttgatccttttggtgctattcctataaacagctttgatggatctgatccatttggtgccttcaactccgatgttggatcatctagtataccaccacccacgcagagttctgttggaaatatcagcacaccaagtcagaaccctcaagcagcatctgactttggtggctttgtgtcgagcactgtagaaacagcagctaaggacccctttgatttttcaagtagcaatcttgggaaaacacctttggcagatccaaaggctgatgcatccgattttggtgcctttgtatcgcacagtgaggaagtagccaaggatccttttgatctttctttgagtaccagctctggaaggacaaaccaagcacctctggcggctcccaagtcagataccaagaaagaaaattttcaggtcaagtctggcatatgggctgactcattgagccgtggactgattgatctgaacataactggaccaaagaaggtgaacttagccgacgttgggattgtcggtggcctcgatgacgggtctgatgataaagctctgccctcatggaccatgggtgcaggaggttccagcctaggaatgtccggaattccttcatctacacaaagtggtggcattgagagcttagctaactacaacaagtaccagtttggctttaaatga</cdnaseq>

Protein Sequence

<aaseq>MDFVKVFDQAVREIKREVNLKVLKVPELEQKVLDATSDEPWGPH GTTLSELSHATKKFAECQMVMSVLWTRLSERGSKWRHVYKALTIIEYLIANGSERAVD DILDHYSKISVLSSFEYVEPNGKDAGINVRKKVETILGLINDKEKIKSVREKAASNRD KYVGLSSTGITYKSSSASFGSNYSSGERYGSFSGTREGDSYGDSYRDKEPVKSSPSYT GSQKSGSRIKKDVNRRNEDSPSSLKSNAKGNEDDFDDFDPRGSSSNGAANTNTSGVDL FAPNLLDDFIDVPAAATHETNDSADAQVDLFADADFQSAIPSTETAAGSDVQGNVDLF AEQPAFTAAFPPQTGFIPPPSSGTSEANTSTSKNTTPEPFDPFGAIPINSFDGSDPFG AFNSDVGSSSIPPPTQSSVGNISTPSQNPQAASDFGGFVSSTVETAAKDPFDFSSSNL GKTPLADPKADASDFGAFVSHSEEVAKDPFDLSLSTSSGRTNQAPLAAPKSDTKKENF QVKSGIWADSLSRGLIDLNITGPKKVNLADVGIVGGLDDGSDDKALPSWTMGAGGSSL GMSGIPSSTQSGGIESLANYNKYQFGFK</aaseq>

Gene Sequence

<dnaseqindica>295..335#457..508#1155..1234#1666..1744#1916..1999#2103..2248#2355..2573#2927..3018#3424..3614#3847..4453#4558..4751#atctctcctctctgctccgcgagtggccttttgcccacctaagccgcctccccatcctctgcttgctccggcgggcggcgagcgccccgccggaccgacgacgacctcgccgtcgagctggtggccgctcaacctctagcgctcgcagggatcccgggaagcctccctcggccgcgtcaccaccggcatctggtgctttccgctcccaccacagtgtgctgctctcgtcagttgccaccgcccgactcggcgctccggagcccagatcttggttccggaggatcctctccggcgatggatttcgtgaaggttttcgatcaggccgtgcgggagatgtaagttgtgggccgagcccgagatctcgccattgctgttccgatttctcgaggatgtggcgtgttctgagttggatccgtgagatcctgatccgttttctgtgtgtgtgttgctttgcagaaagagggaggtcaatttgaaggtgctcaaggttccagagctcgaacagaaggtgcgattgcgatatcacctttatcttaactctgtgatttttgcaatagagttgtaacagctggattggttcgtatgatgggtgtgggagcttgggttttgcataatcatgtgcttttgatatatttgttgtctgaccccattacacgctgttagaattcatgtaatcatgtcatagtagtactttaaggaaatgaatttcaggagtaccaaaattaagtctgcaatgtgtttactatttaggacttgaggtaaaccagagatctcaagtgctttcaattgaagtatctgtattgccaaatttgtgccgttgaaggctactgtctggagctgatgcgtggatatattgagttcattgtacattttgtagcacgccttgatagttgatagtcatgttgctttgacaatcatgtatcttgtccgtggtgtagatcatggttgtaagggttttcgtctgtaatagtacattcacccttatggtgcatgtttggttattctactgtgggagtatattacagatatgtatatttcttattaacttccacagcaaaaaaatatagatgtatatttttgttcttagctttgaattttaccttcgattctttttcttatgtagtaaacaatatttctttcctttaaaatttcaggtacttgatgcaacaagcgatgaaccttggggccctcatggtactactctttcagagctatcacatgccaccaagaagttgtaagttacaatctcttattaactaggtgaaaccccgcgcgttgctgcgggattttagtatgatagcaataagtagaaataatgtgtaagatagctagacgacataagcttacataatttgatatggtttatgataatttaaatagtatttaaaatgatggagaggtatatttaaatattatgtgaattatgtgagatgatgatttaacatatttgcattttaaaagtcaaaaaattaataaattatagaattatagataatatagcatgcttgcatgatgtttaagatgtaataattattagtggatgatgtgacatctttgtatgttgagctttaggatttagtgggttgtaactttatagtaagataggataggatatgtattttccccttgttttttatgctgaaatggtgctttcaaattttgtagcgctgaatgtcagatggtaatgagtgtcctctggactaggctgtctgagcgaggctcgaaatggcgtcacgtgtataaggtttaactcttgaccattttgtattttctttgtcaagtactggggctttgtactatgagttctacattggtcactatgccaataccaatggtcaaagtgaacagcaaaccttggtatatgcatggttttgtatcagcaatgtaactaaggcatataactattaatgtccaggctttgacaattattgagtacttaatagccaatggttctgagcgggcagttgatgacattcttgatcactattcaaagatctcggtatgtcttgtttatgcttttgtttctgatatatagtatttcttttctcttttttgaagtttatgtcattaaaaactttgttctctgtgctatatttgtcaaggttctttcaagttttgaatatgtggaacctaatggaaaagatgctggaataaatgtgagaaagaaagtcgaaactatattgggactcataaatgacaaggagaaaataaagtctgtaagagagaaagccgccagtaatcgtgacaagtgagttcttaaggaaaagaataagttgtgttatactatcttttttctggctgtttattcatcctgtacaactccaattattaacatatgtttgttgtggatgaaggtatgttgggctatcatcgacagggataacatataagtcaagctctgcttcatttggtagcaactatagttctggtgaacgttatgggagttttagtggtacaagggaaggtgattcatacggtgacagttatagggataaagaacctgttaaatcctctccaagttatactggcagccagaaatctggcagcaggataaaaaaggatgtgaatagaaggtgcttcaagattcctttacattttccatacatataatagcagctgctgatatttatagtttagcctctcattaaaaaattaaattggctaaccagtacgatggttgtatggtagctggtaaatatgttggtgggtggtataatagctgcatcacttttatcccaaatgtggaaataaaataaggttttgtggtactacaatattacaatttatgtagtagtgctgaactgtgagcccttttggaggatgataaatgaacagtaacattcctggactcctagcatcaggcttactttgtattactcttcctattctccatcccacctgaggttgtatctgtttgaattaccaggaatgaggattcaccgagctccttgaagtctaatgcaaaaggcaatgaggacgattttgatgattttgatcctcgtggatcttcttcaaatggtaaagtattttattatgctatttctttgccaggatatttgtttttaactgtactactgaatgcatgttccagtcttggcatgaaaatatttcaaaactgtcactttttcaagcatttcaccccctcaattctgcatttacatcttgcaaatgttgcgcttatattattatcttctgcccaactataattggaaggtcaccaggtgaatgacctcttgctggaaatatcaaacaaatatatcctgattattataactatttggctgaagtgaacaagtatgcaggttttttttttccttttatcgtgaaaagtagtcagtgttatatgatacattttccaaacatgaagataatacaattgtagatgtagttgtgatccttaattctttcaatctctatctacaggtgcagctaatacaaacaccagtggcgtggatctttttgccccaaacttattggatgatttcatcgatgtgcctgcagcagcaactcatgaaacaaacgactctgcagacgctcaggttgatctgtttgctgatgcagatttccaatcagcaataccaagtacagaaacagctgcgggttcagatgtccaggtttgtttatccatgagactacttgaatacttgatacattttttttgcaggcctgatgaatatagagaaaaatgtttatcctagtcctccaatctgggatatgaaatgtgctgaaaacaattgagggtgtttctccttaaatatttagttgtgcttcattaatcttagaaatcatatagttcttcaatccattgatcatgacacagggtgttatatcaaaatgatactgcagggcaatgtagacctttttgcggaacagccagccttcacagcagcctttccaccacagacagggtttattccaccaccaagttctgggacatctgaagcaaatacttccacgtctaagaacacaactcctgaaccttttgatccttttggtgctattcctataaacagctttgatggatctgatccatttggtgccttcaactccgatgttggatcatctagtataccaccacccacgcagagttctgttggaaatatcagcacaccaagtcagaaccctcaagcagcatctgactttggtggctttgtgtcgagcactgtagaaacagcagctaaggacccctttgatttttcaagtagcaatcttgggaaaacacctttggcagatccaaaggctgatgcatccgattttggtgcctttgtatcgcacagtgaggaagtagccaaggatccttttgatctttctttgagtaccagctctggaaggacaaaccaagcacctctggcggctcccaagtcagataccaagaaagaaaattttcaggtcaagtctggcatatgggctgactcattgagccgtggactgattgatctgaacataactggacgtaagttcttccttttctccttgcccttttgacaaggatatcaccttgccatatcttgatggcagaattattaatgatttctcattgttcttcgcaaattacagcaaagaaggtgaacttagccgacgttgggattgtcggtggcctcgatgacgggtctgatgataaagctctgccctcatggaccatgggtgcaggaggttccagcctaggaatgtccggaattccttcatctacacaaagtggtggcattgagagcttagctaactacaacaagtaccagtttggctttaaatgagctttcatgtgaggctttctagtatatgccggttattgtcggaatgtcggcttgtgccttatttattttttgttgattctattctcccctcttttgatgcttacattcctttacaatcgcctccaaggatcgtgatcttggttcgtcttgtcgcgcttgtattgtatttattggatttgcggatgagagactcctacctatatcacaccctgattcaatttaactgtactgttatttcacaatcgtgttaatcctatggctcacctctatattgcgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0599900, RefSeq:Os04g0599900