Os04g0600300

From RiceWiki
Revision as of 11:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0600300| Description = Similar to Alternative oxidase 1a (Fragment)| Version = NM_001060294.1 GI:115460317 GeneID:4336875| Length = 1578 bp...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0600300

Description

Similar to Alternative oxidase 1a (Fragment)

Version

NM_001060294.1 GI:115460317 GeneID:4336875

Length

1578 bp

Definition

Oryza sativa Japonica Group Os04g0600300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30689981..30691558

Sequence Coding Region

30690186..30690245,30690354..30690971,30691083..30691412

Expression

GEO Profiles:Os04g0600300

Genome Context

<gbrowseImage1> name=NC_008397:30689981..30691558 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30689981..30691558 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctcccgaatggccggagcgacgctgctgcgccacctgggcccccgcctgttcgccgccgagcctgtgtactccgggctcgccgcgagcgccaggggcgtcatgcccgccgccgcgaggattttccccgcgcggatggccagcaccagcagcgccggcgcggacgtcaaagaaggcgcagccgagaagctgccggagccggcggcaacggcggcggcggcggcgaccgacccgcagaacaagaaggccgtcgtgagctactggggcatccagccgccgaagctcgtgaaggaggacggcacggaatggaagtggctcagttttaggccatgggacacgtacacgtcggacacgtcgatcgacgtgacgaagcaccacgagccgaagggcctcccggacaagctggcgtactggacggtgaggtcgctggcggtgcccagggacctcttcttccagcggcggcacgcgagccacgcgctgctgctggagacggtggccggggtgcccgggatggtgggcggcatgctgctccacctgcgctccctccgccgcttcgagcagagcggcggctggatccgcgcgctgctggaggaggccgagaacgagcggatgcacctgatgaccttcctggaggtgatgcagccacggtggtgggagcgcgccctcgtgctcgccgcgcagggcgtcttcttcaacgcctacttcgtcggctacctcgtctcccccaagttcgcgcaccgcttcgtcggctacctcgaggaggaggccgtgagctcgtacaccgagtacctcaaggacctcgaggccggcaagatcgagaacacgccggcgccggccatcgccatcgactactggcgcctccccgccgacgccacgctcaaggacgtcgtcaccgtcatccgcgccgacgaggcgcaccaccgcgacctcaaccatttcgcatcggacatccagcaacaggggatgaagctgaaggatacgcctgcgcctatcgggtatcactga</cdnaseq>

Protein Sequence

<aaseq>MSSRMAGATLLRHLGPRLFAAEPVYSGLAASARGVMPAAARIFP ARMASTSSAGADVKEGAAEKLPEPAATAAAAATDPQNKKAVVSYWGIQPPKLVKEDGT EWKWLSFRPWDTYTSDTSIDVTKHHEPKGLPDKLAYWTVRSLAVPRDLFFQRRHASHA LLLETVAGVPGMVGGMLLHLRSLRRFEQSGGWIRALLEEAENERMHLMTFLEVMQPRW WERALVLAAQGVFFNAYFVGYLVSPKFAHRFVGYLEEEAVSSYTEYLKDLEAGKIENT PAPAIAIDYWRLPADATLKDVVTVIRADEAHHRDLNHFASDIQQQGMKLKDTPAPIGY H</aaseq>

Gene Sequence

<dnaseqindica>1314..1373#588..1205#147..476#cacaccacctatcacagcaacacaagccaaccacaaagaattctcatttccggtaacttttctcaagccttttgggcgctctgagaatcatcacacggaagtcaagcctttgttgttgtcgtgattagtttagtttagtcaccgagatgagctcccgaatggccggagcgacgctgctgcgccacctgggcccccgcctgttcgccgccgagcctgtgtactccgggctcgccgcgagcgccaggggcgtcatgcccgccgccgcgaggattttccccgcgcggatggccagcaccagcagcgccggcgcggacgtcaaagaaggcgcagccgagaagctgccggagccggcggcaacggcggcggcggcggcgaccgacccgcagaacaagaaggccgtcgtgagctactggggcatccagccgccgaagctcgtgaaggaggacggcacggaatggaagtggctcagttttagggtaagcgctcatcaaccattgatgtgtgcgcttctttttttgtttttttgcacggtgaattctcgatttgatcgtgttcatgatgtgtgtttcttttgcattgtgacacagccatgggacacgtacacgtcggacacgtcgatcgacgtgacgaagcaccacgagccgaagggcctcccggacaagctggcgtactggacggtgaggtcgctggcggtgcccagggacctcttcttccagcggcggcacgcgagccacgcgctgctgctggagacggtggccggggtgcccgggatggtgggcggcatgctgctccacctgcgctccctccgccgcttcgagcagagcggcggctggatccgcgcgctgctggaggaggccgagaacgagcggatgcacctgatgaccttcctggaggtgatgcagccacggtggtgggagcgcgccctcgtgctcgccgcgcagggcgtcttcttcaacgcctacttcgtcggctacctcgtctcccccaagttcgcgcaccgcttcgtcggctacctcgaggaggaggccgtgagctcgtacaccgagtacctcaaggacctcgaggccggcaagatcgagaacacgccggcgccggccatcgccatcgactactggcgcctccccgccgacgccacgctcaaggacgtcgtcaccgtcatccgcgccgacgaggcgcaccaccgcgacctcaaccatttcgcatcggtacgcatatgccagcctgaaaacaaccaatctcgcctgcttaatttttgtgtgaacgggtttgagctaaccgatcgcgtttctcgtgttggtacatcacttgtgcaggacatccagcaacaggggatgaagctgaaggatacgcctgcgcctatcgggtatcactgatcatcattcatcaacgggcgatgcctgctcagttcatcaccatcactgctactacatgcgtattttacatcctatttgggataaactttgttctgtgtatatatgtaaataagctattgtcactccgttttatgcctgtacctatatgcatgctgagattatgcaaattgtgaataacaatatagtaagattttttttggagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0600300, RefSeq:Os04g0600300