Os04g0602700

From RiceWiki
Revision as of 11:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0602700| Description = RNA-binding region RNP-1 (RNA recognition motif) domain containing protein| Version = NM_001060310.2 GI:297603303 Gen...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0602700

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001060310.2 GI:297603303 GeneID:4336892

Length

1905 bp

Definition

Oryza sativa Japonica Group Os04g0602700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30812307..30814211

Sequence Coding Region

30812307..30812366,30812536..30812601,30812815..30813099,30813260..30813385,30813584..30813670
,30813789..30814211

Expression

GEO Profiles:Os04g0602700

Genome Context

<gbrowseImage1> name=NC_008397:30812307..30814211 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30812307..30814211 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggctccgggtacacccgcccgccgccgccgccgccgctcggcgagggcgccgctcccgctcccagcgcggccctgtacgtggccaactgcggcccggcggtggggctgacccacgacgacatccgcgcggccttcgccgccttcggggaggtcgcgggggtccacggcgccgacggcagcggcgtccgcgtcatcgtccggttccgcgagcccgccgccgcggaggccgcgatgtccgcgctccatgggcgcccttgcgccggcctcgctggccgcgtgctgcacatacgatactccgtgcccgccaagccgaaggctccggttgggggctcgcttccggtggccacctcggcgtcggagctgggcgtcccggggatttacttggtaccagatttcgtgacggccgctgaggaacaagaacttcttgccgctgtggataatagaccgtggaaaagtttggcgaaaagacgagttcagcattacggtttcgagtttctgtatgaaacaaggaatgttgactcaaagcagttcttaggtgaattgccaccttttgtttcaaagattattgataagatcatgtcatttcctggtgcaaataaatgtactagcaagctggttgatcaattgacagtgaatgaatatccctgtggggtaggtttgtcaccacatatagacacacattcagcattcgaagaaatgatttttagtctttctttggctggaccatgcattatggagttcagaaaataccctaaaggcagttggcgtgctccaagtatggtcagtggaactgataaagatagcattgaagagccacagtgcattagaaaagctgtttttctacctcctcgatcgatgttactgatgtctggagaaggccgatatgcttggcatcactatataccacaccataaaattgatgatgtgggtggtcaagtcatcaagagaaatacacgacgggtttcctttacttttcgaaaggtgaggatgggtctttgcgactgcgaatatggccagttttgtgattctcagagtaagtaa</cdnaseq>

Protein Sequence

<aaseq>MAGSGYTRPPPPPPLGEGAAPAPSAALYVANCGPAVGLTHDDIR AAFAAFGEVAGVHGADGSGVRVIVRFREPAAAEAAMSALHGRPCAGLAGRVLHIRYSV PAKPKAPVGGSLPVATSASELGVPGIYLVPDFVTAAEEQELLAAVDNRPWKSLAKRRV QHYGFEFLYETRNVDSKQFLGELPPFVSKIIDKIMSFPGANKCTSKLVDQLTVNEYPC GVGLSPHIDTHSAFEEMIFSLSLAGPCIMEFRKYPKGSWRAPSMVSGTDKDSIEEPQC IRKAVFLPPRSMLLMSGEGRYAWHHYIPHHKIDDVGGQVIKRNTRRVSFTFRKVRMGL CDCEYGQFCDSQSK</aaseq>

Gene Sequence

<dnaseqindica>1846..1905#1611..1676#1113..1397#827..952#542..628#1..423#atggcgggctccgggtacacccgcccgccgccgccgccgccgctcggcgagggcgccgctcccgctcccagcgcggccctgtacgtggccaactgcggcccggcggtggggctgacccacgacgacatccgcgcggccttcgccgccttcggggaggtcgcgggggtccacggcgccgacggcagcggcgtccgcgtcatcgtccggttccgcgagcccgccgccgcggaggccgcgatgtccgcgctccatgggcgcccttgcgccggcctcgctggccgcgtgctgcacatacgatactccgtgcccgccaagccgaaggctccggttgggggctcgcttccggtggccacctcggcgtcggagctgggcgtcccggggatttacttggtaccagatttcgtgacggccgctgaggaacaagtgggtggtttcagatttagaagtcctccgagctgcttatctttgatcaagcgagatgatatgaccttctacattcgtgttgagatttgacagtggtgcatctgtgcttcttctgcaggaacttcttgccgctgtggataatagaccgtggaaaagtttggcgaaaagacgagttcagcattacggtttcgagtttctgtatgaagtaagtttgatattgtaagtatcccagactgcacagatgcataggaatggtttgtgtgatcgtgatatagacaaactttagtactttgtagcttcttcagaacaagtttcattttatcatcatatcttgcactgaaagatatctctgctttctattgtaacgactgctccgcaataaaggtttgattggcttgtgcagacaaggaatgttgactcaaagcagttcttaggtgaattgccaccttttgtttcaaagattattgataagatcatgtcatttcctggtgcaaataaatgtactagcaagctggttgatcaattgacagtaagtttgtaaaaatagtttctgttttggtttccattcaatgtgtttcatgatcttagtttggtccaaggtcaatgatggatctgtgttcttagctgtccgtttgtaacagcgttatgtcttaaaatcaatgttagaattaacctctgtatgcttacaggtgaatgaatatccctgtggggtaggtttgtcaccacatatagacacacattcagcattcgaagaaatgatttttagtctttctttggctggaccatgcattatggagttcagaaaataccctaaaggcagttggcgtgctccaagtatggtcagtggaactgataaagatagcattgaagagccacagtgcattagaaaagctgtttttctacctcctcgatcgatgttactgatgtctggagaaggccgatatgcttggcatcactatataccacaccataaagtatgcgatgtttaagtcaatatatttttcttctgctctgattacagaattgcacacaatagttcaactatttagtaatcttcttcctatcacagaaagtaactaatgcctttagtttttttgggcaaatagtcttggtaatacattttttgctatgctttccttaaattttataccaaacaaacacaattaaaatgtgatcttttctcttagattgatgatgtgggtggtcaagtcatcaagagaaatacacgacgggtttcctttacttttcgaaaggtttgtcctatttttgtccacctccaactttcaaggtgttttcaattgaatatggtgtctttgactgatcatgctaacattttttagttgggtttggaaacatcctcctagttttacttaagtgcccccttgccttacctacacctttatttctgggttgtgattacaggtgaggatgggtctttgcgactgcgaatatggccagttttgtgattctcagagtaagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0602700, RefSeq:Os04g0602700