Os04g0603900

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Revision as of 11:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0603900| Description = Conserved hypothetical protein| Version = NM_001060321.1 GI:115460371 GeneID:4336901| Length = 11613 bp| Definition...")
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Gene Name

Os04g0603900

Description

Conserved hypothetical protein

Version

NM_001060321.1 GI:115460371 GeneID:4336901

Length

11613 bp

Definition

Oryza sativa Japonica Group Os04g0603900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30862072..30873684

Sequence Coding Region

30873121..30873390

Expression

GEO Profiles:Os04g0603900

Genome Context

<gbrowseImage1> name=NC_008397:30862072..30873684 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30862072..30873684 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccatgtcgatccttgcaaagaggtacgaggtcttggacttgaacgccgaccccatctcgcggtctagcgtcagcgcaattgtctggtcgccattgctgtcgttgagcagctgcgtctggccaaacagtacctcgagctggtccgtcatgagcccaccgccggtcaccggcgtggcggcggcgagcagcgcagaagccaacaggcaggctaggaggtggtgcgccctagccggcgccatggcttccggccggtggtgtaaactgtga</cdnaseq>

Protein Sequence

<aaseq>MSMSILAKRYEVLDLNADPISRSSVSAIVWSPLLSLSSCVWPNS TSSWSVMSPPPVTGVAAASSAEANRQARRWCALAGAMASGRWCKL</aaseq>

Gene Sequence

<dnaseqindica>11050..11319#gagtccttcgccccgccgccgaactcctgcaaccaggactgcctcggcactcggcagccaaccggttgaaggtcagaactcgatcccctctattcaccctaatttccgttgcttgcatgcgtgaagtggactgcgttatttgattgtggttctgctcctgcgcgtatctattccgtttagcaacggaatttcgtgccatatcgatgaacttgttgaactgtggaatggcgttgttgtcagtagaacttgtgaatttgtggaattagagaatagtgatgcccttgctctctccccattagttgagagatgatgatgagagttgagagacaataaatagaccttttcttaaaaaaattttgtagcggcacaaaaatgcgaggctcacaacagaaacattcatgagcactctatatcaataaagggaaaagaaaaacactaccaaaagacctacttgctactgcagaaagagcagggtgatcctagagcaatagcagaccaaaataggtgaagagaagaactcgagaatggcacggaaattgcgtgccctcaaaaatgggtgatgccttcaaggcgaggacaaggggctgttcctcagagttgagctaaaagagctggagatcagactttagcctgttttgcttccattttggaaggtttttgaatgatgcccttgtcatgccaaacttctctgtgaactcaactgatgataagtagacctgcattcagttgaaaatagtacatattattgtgttcatcttacaacatcaggagaaaataccaagtggaaaaattagttgatcacctctcgcttggtaacatcaatgtcaggagcaggatcatcagatgtggtggtcaaacgttcatatgggtagattgtgctgttctcatcatcttctggctcgttttcactttcaccgatcgttgagccttcctcctgtattgccttctctgcctcggggctcgcttaattttgcagaaattcataaaggaaaattataagacaactgaacacttgccttccgtattctagcataataggtgatagagtaccttttacagacttaggtattgtacttttcgtaggaccctcgaaagcactggtgagagcattgatagctgattgtttggatgatgtctttggcaattcagaccctccggatcttgggaaaagcttcttgacagcagggggaggggtggaaagataccgggtacttgggttctcaaaggcagaagctattgcggtgaaagctggagatcttcctcgaatacggtgacgttctgggctgtgggacatacttcttgtgcgctgctgagatttatcttgtcctgcgttccttcctgaaaacgctggtgttcgccttttaggtttctggcaacgcataaagaatatatatatgtaaggtaatctatatggattgaaagagaggccattaagtgtaaatcacaatatagattgaaagagaggccattaagtgtaaaaccccaaagattgaaacagaggccaaatttccctggttgaaaggcattggtaggacagtacatcaccaaacatgaactgtatataaatgatgcaactatatatacaactggacaagaaaaatgaaatctcatcaaatgttagccacttggaacccatatttcaaacttacactcaacatggcagtttggtttgttaatcagatgaccaagagtttaacaatggctcattggtacaaccaagtaattatcacatgcatatgtgcacagctaatcacaagtatcaacaaatagcaaaaatgatgaagagagtgactttttacaagcaataaggaccgcattctatcaatatgctacttgagcactatgttgagacttacatcaagcgatggagttgctccaccctttactattgcaagcttcctctggtatgaactgccatgcatctgcgacaaaaaaaaaagaaagaaagagtagatgtgagaaaaccaaaatggggggtatgtttgggcgctcatctaatcaccatagaacaaaaactgatcttgaatctaaatataattacttaccagcgattttgctgagtcccaagtgaagaacctagtaaaaaactgtggctcacttccttctgtaacaataaaaattggtgtgtcttgcgagagattttccataaggaaatcatgtagaagaaatttctagcatagttacagtgagaaaatgaattaagatgccaaacagaaaacgtgatttctaattagaatagacggatcaagtaactttagttaatacctcaccgatgtccatcgcttgtgatctcaatttggcatccacctcctgtccaacccaaacaaacaagtcggtgcggcagtctagaacgaaaatatcttctgccatcaggtcatcctgagtaaagtggtgtatttccttgacctgatcatgtagatttcaaaggaaggactggcattagacacatggagagcacgcttagggggggaaaaagctatgcgtcagtttttttttctgacctttagattttcttcatgaaaccccaccagcaaaacatttgaagtgcagaaaaaaacaaaaatgtcaatagatgttgaaatggtaatcccactaagtagaccatatcaaaacattcaataatttgtttttgattacccttggataagatacatgagaaaagatgagggtcgctttcattttcttttcctatttttttgtttgaatacttgcattttccacctaagagttcccagaattggtcggtttctctcccctccttttgtgacctggatggcagatctggctgtatcatgtaaaagagaagcacaaaaaagaagttgtatcaatgttcagtggacatgtataccacgagaaattttacggtccttgagaaagtacctcaaggtacctaaattttacgctaaaaattttggtacccaggtaccttatacctagagatacccagttttacaccagaaatggtggtacctcctgttaccttctcaaggatggtaaaattacccgtatatcaaagctaagattgtttcagaacataggcaaaaaacataagccaaataagccatgatatcaagaagaatgattatgacttgtgaggatgacaagcatccaataaccatacataactactagacttgtatatatccacatgcacataaagttacaacaagctagatgaacgcctcgcaaaattcttgcttttatttctaaaattatagttgtatctcttatatagttaatatgtactccctccatccctaaatgtttgacgccattgacttttttaaatatgtttgaccattcgtcttattcaaaaattttatgaaatatgtaaaattatatgtatatataaaagtatatttaacaatgaatcaagtgataggaaaataatttataattacttaattttttttgaataatacgaacggtcaaacatgttttaaaaaatcaacggcgtcaaacatttagggacggagggagtatctaataaatctacatggttataatttggtcgcatcatgatcaactatatagccttctcttcttttctaccatattcaaactgcattttgctgattaatatcaaaacctactgtaagatttcgattaaggatttaaatgtataggagcataccaagtgtcaggaaaactgcatgggtataaagattaatattttccacaataagtgattcacaattaactaaattatagttgtatctctcatatagttaatatgtatctaataaatctacatggttataatctggtcgcatcatgatcaactatatagccttctcttcttttctacgatattcaaactgcattttgctaattaatatgaaaacctactgtaagatttcaatcaaggatttaaatgtataggagcataccaagtgtcaggaaaactgcatgggtataaagattaatattttccgcaataagtgattcacaccttaattacatctagctgtctctcaaccaagtcattatccagtgaggttgtaaggttcccagtccatgtgaacacagtgtttccattgtgtagaatgtagcagtaggatgaatttaatgacgaagacacctagtaaaaaaggatcatagagatgaaaccattgataacaatataagaattacgctctcgcatatgtctggaccaaacagatgcctttgcacttactgcatcaacttgaattgcttgcatgttttctgatcctgagccttgaatccggaagagagcaagcccaccttcaacgtaagtgtcgtcatcggtaccatttacagcaataaagttcttgtatccagagctaagtccaccctacattagaaagccggtgtgagggggagagggattaagtgtcaaattgttatatatatctaacagtcactctgtcagatccactcaaggatattgacttatctactgagtagaagaaaaaccttaaaaacttgaagactctgaaatatgacgaaaaattgaatcggttctttcccttcatagaggcgagcctgcatggaagcaccaatgaattagagtgataatgtgatgtaatatgtcatatatggacaatggacaggttacctgggcagcctggaattttgcagcctgaaacatcttgctagctagtgaaattgccgatgttctgtcctcctgaaagtaattaagatcgcccacatgcagaaacttgaatttatcatacagaagttaaacagttaccacattacgcaaacctctctgttgtcctatcaatctagaaaaaatcagctaacagcatcagactgctaactttatccttagtccttgctaatgacttcacaacaaatatttaattagttcctagcacatatgtcctataaatctatgtgtatgtttatttcaattttttcataactagagttagtgcgtagatattacctcaacactcttcttcccaaaccaagttccaataagacattcctccttatcatctccagtgtatgtgtattgaaaaatgtagcaatctccggtgtaaagttttgattgatcagaagatgaaagaagagtcttgccatcgccatttactcgccagacctgtacaatcaccatcaaacttcactaaaataaattggttgactgcaatgtaaaaatgttagttcaaggatggacatcaaactgtcaaagatagaggggtgtagatcgattgcatgatttagttagatgcctttgcatacatataggtagtgtttggttgcaaggatgggatgggatgggatgggatgaacccacttttaggggtgtttggttgagaggtgagtgggacgggatggtccctggagaggaatattcctctcagatccaagatgaaacggtccgccaaaatcggccggaccaatccatcccacttcaatggagcccacggctttagctcctgtagcctcccgctcggctccgccgcagcgccgccgcctcatccgcgtcgacctccgcctccgcgaccggccgtcacctcgtccgcgaccgcctccacgaccgaccgccgccgctcgtcgtcagctcccacagcctcccactcagctccgccgcggcaccgccacggccacccgtccctcccccggcaccgctccctcccccggtgccgctccgtcctcctccgcctgctccctccacctcgcctcgcctccacgaccggccgccgcctcgtctgcgactgaccgccgtcgctcgtccacgttcgcctccgcgaccggccgccgttgctcgtccgcgcctcgtcgcctccgggaccggccgccgctcgtctgcgcctcgcctcgcctccacgaccggtcgccgcctcgtccgcgaccgcctccgcggccgaccgccgtcactagtccgcgcctcgcctcgcctctcctcacctccacgaccagtcgccgcctcgtccgcaacattgtccatcccatcccatctcaatcatttttaccaaacaaaaaactataaccatcccataccacaaaccaaacacacaactggaaccatcccatcctaaaaaactgggattggtctaacccatcccacttggtccccaaaccaaacacacctatagtgtttgttgattaccctctattaatttatttttgcatgagtacattggcgtttgagaggcttcaggtctcaacttcaaaacctagctagcaccctaaatgatgtgtagacaaacaaatttaaaaggattgttgctcacagcaatacagattcataacagctatcgaaaaaaaacctgtaaatgaccagtgcaatcaatataaggttggggttcttcttcttcaggagcagccttcatcaatcctttaacatccaatccttgacttctgagtagagctgtagtaagaatatacatgatgaatgtgtacatttgatactcttttagcaatacttcacgcttgaactaatgagtctgtaggcaatcacctgccactttgcctcggccatcctcagatgacagcttcaaatcaggagtaggcggccacttgttaaattttgacttgaacatgattgtttcgaatccctcaatcactttgataacatttgatccttttcggttctcatcaatgagcaatttctgtaaataagtaagagaaacacacacagcaaagtgaaatgtgaaatgtgcctgtgttttggtcataagaatatatatattttttaaaaaagtcagcatggtatatcagtaaggtggtacatttgctgagtactggaatacatgccaaatagttttttttttatttgtaagatggaaatgaatggacttttacaaaagttgtattgctgtagccaagttctaccttgatgttccctttttgtttcataacactataattgaatggagagtaccaatgaaaaaaaaatcagcttccaataatcagaaccttcatacacatatggccaataagaaattacctcagcagcttcacttgcaccctttctcacttgcaaagaagtacctctgcccatccaaacatacatttcagctccacagtccaacaagtagcatttgtttgtctcaagtaactcatgctccaaagattcaaaactaatatgctccagcgttccttggttaaaactgggaggaagtaatagaaatcactaattcagtttcataaattttaagagaattgatctcaaaatagcatcatttgactgcaaattattctcattcaaaactaacactttcttgatgcgggtattggaatattgatagtgatttgacttgagtattaccatagcaatttggtcacagtttccttatcatccccattgtcctctgaagatgtcttctttgggagaggagcaaaaccaccaaacaaaccccaaaattcaccagcttcagtatcggccatcaactttccatcctctatgagaggaatccagattgtcaaatgctttaaatgtgactttgaatattcaaagcaaaagcacataaacaaaaaaaaaaaagcttaccaacagctgcaacttcgcacttgccctcatggaaagtatctttgatatattgcacaacttcaagagcttttgctctctcttgaatgcatgagttagagccattgaactggaaaattttgttcgcggtatccaaaatgaatatgtcctcgtgattaagggatgaacgaacaaaaggaacctggtttgtatgacaagcagcataagaataaaaaacccagcaagcctttgcataaacaaaggcagtgatcaacttcaatagattacctctttaacatgaacaacatgctttccttggcacacatataagcgggtaacatgatcttgctgattgacctctacatgattgaacccagaagctacccctcctggctgtggcatgatgcatggtctaaaataggagagaagcttttcagtttcaccgccttgtacttccctgtactggacagcacgccctccaagggcagcatcaagctccacagttagaattgcagcagttccagcttcgtcctttcaaatattaggcatttgtgtattaatagttagcttgggagagctaagtcaagtgaggtgctgccagattatttgagagtctacctgactagtatcctttccaagccagtagtggagatcatggcgaaatgaaccatttttcaaggctgtcgtctataggaagaaagatgaatatgaggttcaaaacacatggtgcagtaagcatataatgcatgaacaaacttgaagccatatactatacaaattgtggcatcaagacgacaatggtatggttagtgaagcatgtggttcaccaaaatgacttaagtattgcattatctagtgtggtaaaagataaagaaagaaaatagtttataatgtcatgtaatgtttgtttcaagatgaattacatcatctatgtttgcgattatgcaccaataatgttgaaaaggaataacaaggaatgaatactaccataccttcaagatgatatatgaatcacccatgtaaaattttccgtgtgaagatgttggcacgggaacaggcttgaagttttcaatacgccatacctccaaaccactgtaaggtaattaaggagtacaatacatgtacaaaagactcctctgatcgacatagtggagggctacaattctcatgggggttgatgaccaagtctaactttgtgaggataaatcagcagcccttaaccttagttttatttgactggtatttactttaacttcatcattgtttttgtttggtttagtcaccctatgatgctatggaactactttttcttatagatgcaatagattataaattcatgatagccttttgttccagctttgcctatttttttagactatccaggaacaattatgcttagcctcttgtgttggatgattttgttgccaagaacagttaacaatcattccatccatgattacatatgttgacattttttgtgtgtgagtcagtaataatcctttggtcacaaaatgtattttctgtgagatcaagtgtccaagccataataaatattggaaatagaatgcagtgaggatactccttttgtccaactccacggaaagccggatctacatctttcatagaaattgacatgcttgatgttgtgaaagagcctttcctgattttgtctcaaaacgacgctaacatcatgctggaactgcaaacaagtttttttttttaagaaaaagatgaatgatatgatcatagttcaaacatcacaatggtcacccaaacaccaacaaaagctcattatgatatagttggcaacaaattacacccgagaacacaaaaggatcataggaacataaaaaatgtcattgaatgaaaaataaaagaacacaaatgcagatagaccctcttacctgaagcctgtgtgttcttgatggcaatgaaatttagaaaatccttgtggggagagaagcgacgacccagagtccggagagaggacaagaggggaaaagtaaagggccatccgcgcaaaacgggttaaggcaaagaaaaggtaaatttgtgagtgcatgcacttagtgtggtaagcggatggggaagtgggttgtttgtggatttgctatatatagcaggggcatgcgccattcatacttttaccttttcttccaaatgatgttcagacctgcaaaatcaccccccccccccccattatacattggaactgcaaaaattgttgtaaatagactaatcctaaaactatcaagactaggaaaataggtgctagtaggattcctaaactagaatatgtcctcatgaaagattgacagtcaactgatggaatggataagaaccaaaactcttgtcatgagttttatcaaccttttctcctgtaatgaattgtttgtcaccattattttcatatattcattacagaattagtttacttcattctgggcccatgttcttgaggtatctcatgatacccaactgatctggggcaggaggagtgtctgagcataacaaaaactttcaaaacaatagaaaagttccaaatgcttttgaaaattttcattcagaccgaaacactcaaatcgaaaaccttcaattttttctgaaactttctgctctctttttcctcctcggggcaaagaatgaaacaatctcaatattccagtaaaatcttcaaaaaaggaatattgattcggtacatttcacgcacttctcacatgcataccgagccacctctatcctactgcaacccacactcttttggataaccatcggggaacctctcggggtcgttgcagtagttgtagatcatgtacttgtcctgggcctccctcagctgctgctgctgcttgacgtcgtccagcccccggtcgaaccagtcactgctgctggccgggccctggccgcatacccacgcataagagctcggcacgcagccgtcggcggtgtagttccggaagtatgccacgaaaggcgcctgcgaccagtcggtcttgatgcggccaccctccgtcgcccagtcgtcggcgtcccacaggcagccaaacagcctcatcggctggtagatcgggaacggcacgccggagtccaagtggttcttgaattgccggatcggcatgttgtcaaccaggatcctgcaattcaccgactttagtgacactggcatacacatttggctcaatgcttttttaccggttctaacgcaacaagcctatttttacaccattaacatactatcttgaaatgcagcttacaggatctcgtctgggttccagatgacggagtaggtgtggaaatcctgggtaggatcaaaccagagccggtactgcacctccctgccgccttcgccgttggcaaagatgttggtatgcagggtgtacggttgcccggtgacgttgcccaggaactccaggtcgatctcgtcgtgggtgttccaatccttctcggatatcaactgcaccacgcaatgtatcacaagctactcaagaatgcagaactatataactgacgatttggcacatgcatgtcactgtgcaggtgcagctgctgtttcatggtcacttacgtatatcgtggtgacggtgccggcggagtcgtcggcgacgagcttgatgtccatgtcgatccttgcaaagaggtacgaggtcttggacttgaacgccgaccccatctcgcggtctagcgtcagcgcaattgtctggtcgccattgctgtcgttgagcagctgcgtctggccaaacagtacctcgagctggtccgtcatgagcccaccgccggtcaccggcgtggcggcggcgagcagcgcagaagccaacaggcaggctaggaggtggtgcgccctagccggcgccatggcttccggccggtggtgtaaactgtgaagtgagtgagtgagtgatgtactgctgtgtgtgaggggcagtgaggccatggtcaagtgcaggctatatgcagaacaatagcaccagggtcaaaagactttcagatcgatctcatcgaactcggcgatggatgcattagatatttggtttcttggaagatgtaaagaagtttggattatgggctggctagtgaagacctaggcatagaaaatgatggaagagtatgtagctaaaggtgagcagagctgggaaaacaagcaagaagttgacctgattaagtgttcgtcacatgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0603900, RefSeq:Os04g0603900