Os10g0133500

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Revision as of 08:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0133500| Description = Transferase family protein| Version = NM_001070646.1 GI:115481035 GeneID:4348049| Length = 4506 bp| Definition = Or...")
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Gene Name

Os10g0133500

Description

Transferase family protein

Version

NM_001070646.1 GI:115481035 GeneID:4348049

Length

4506 bp

Definition

Oryza sativa Japonica Group Os10g0133500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:2066436..2070941

Sequence Coding Region

2066480..2066980,2069725..2070672

Expression

GEO Profiles:Os10g0133500

Genome Context

<gbrowseImage1> name=NC_008403:2066436..2070941 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:2066436..2070941 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccttcttcacggcgcgccggcggaaggcggagctcgtggcaccggcgaggccaacgccgcacgagcacaagcccctctccgacatcgacagccagcgcgggctggagctctacgccgccggcgtcgagttcttccgtcgccgccatcacgctgcggccgtcttctccggtggtgacgacgacaatagcggtgacccggtgggtatcatcagagcggcgctggcggaggcgctggtgagcttctacccgctggccggccgcatccgggagctccccgccgccggaggaggaggaggtggaggcggtaagctggtggtggagtgcacggcggaaggggtggtgttcgtggaggccgacgccgacgtgcggctgcaggagctcggccatggccagccgctgggccctccgtacccgtgcgtcgaggagctcctctgcagtaacgacctcgtcggcgaacctgacgtcgtcgttggcaagccgctgatcttcatgcaggtgacacgattcagaaacaacgaagggttctgtatcggctaccactactgccactccatcaccgacgcattcggcatggcccagctgctccacaccgtctgccgcctcgcgggcggcgacgacgacggcgagtccctcaacgatccgccggtctgggagagggacctcctcgccgtcgcgccacgacgctcctcgccacgcatcaggcacgtcgtcgagcatcccgcctacgacccgctgcccgtctcatcggccgcggcgaaggacgtcgtgtggacgacaccgcgcgagcagatggtgacccgctacttccacctcggcccgacggagatggcagccctgcgagcccatgttctgtcgtccgccactgtcttcgagctcgtcaccaccgtgctgtggcggtgccgggcggcggcgctggggtacgccgcggcgcagcgcgtccgcgtcctggtcatgtcgagcgcgcgctggagctggaaacgcaatccgccgctgccgcgcggcttctacggcaacttgctcgtcccgcaggtcgccgaggccaccgccggcgagctgtgcggccggccactcgcccacgcggtggagctcgtgcgggggaggaagttcgccgtgacggacgagtacatgcggtccatgctcgacatgctggcgcggcgcggccggccgttcttcaacctggactggacgttcgtggtggctgacgccggtggcctcggccgtagcctgggcgtcgtcggaaggtgggagcgcgccggcggcggcctcacgccggttggacaggcgactgcggcgagcatgtacagctactacgagaggtgcaagattggagcaggagaggaagccgcagtggtgtccatgtgcttgccggcgccggcgatggagaggttcgtgcgggagatcaccggatgctccaacaccagatcagcgaagagcgccatgtag</cdnaseq>

Protein Sequence

<aaseq>MATFFTARRRKAELVAPARPTPHEHKPLSDIDSQRGLELYAAGV EFFRRRHHAAAVFSGGDDDNSGDPVGIIRAALAEALVSFYPLAGRIRELPAAGGGGGG GGKLVVECTAEGVVFVEADADVRLQELGHGQPLGPPYPCVEELLCSNDLVGEPDVVVG KPLIFMQVTRFRNNEGFCIGYHYCHSITDAFGMAQLLHTVCRLAGGDDDGESLNDPPV WERDLLAVAPRRSSPRIRHVVEHPAYDPLPVSSAAAKDVVWTTPREQMVTRYFHLGPT EMAALRAHVLSSATVFELVTTVLWRCRAAALGYAAAQRVRVLVMSSARWSWKRNPPLP RGFYGNLLVPQVAEATAGELCGRPLAHAVELVRGRKFAVTDEYMRSMLDMLARRGRPF FNLDWTFVVADAGGLGRSLGVVGRWERAGGGLTPVGQATAASMYSYYERCKIGAGEEA AVVSMCLPAPAMERFVREITGCSNTRSAKSAM</aaseq>

Gene Sequence

<dnaseqindica>45..545#3290..4237#aagtcgagctaagacagccgagggcaccatcaccaagctacataatggccaccttcttcacggcgcgccggcggaaggcggagctcgtggcaccggcgaggccaacgccgcacgagcacaagcccctctccgacatcgacagccagcgcgggctggagctctacgccgccggcgtcgagttcttccgtcgccgccatcacgctgcggccgtcttctccggtggtgacgacgacaatagcggtgacccggtgggtatcatcagagcggcgctggcggaggcgctggtgagcttctacccgctggccggccgcatccgggagctccccgccgccggaggaggaggaggtggaggcggtaagctggtggtggagtgcacggcggaaggggtggtgttcgtggaggccgacgccgacgtgcggctgcaggagctcggccatggccagccgctgggccctccgtacccgtgcgtcgaggagctcctctgcagtaacgacctcgtcggcgaacctgacgtcgtcgttggcaagccgctgatcttcatgcaggtttatatatactacctccatcccaaaatgtttgacgccgttgactttttttaaaatgtttgactgttcgtcttattcaaaaaatttaagtaattgttaattctttttctatcatttgatttattgttaaatatacttttatgtttacatatagttttacatatatcacaaaagtttttaaataaaacaaacggtcaaacatgtttaaaaaagtcaacggtgtcaaacatttagggaaggaggaagtatattcaacttaaccctgttttacaaaataactagaagtaggagggaagaaagcggcatctctgtatttctaaatgataaaattaactatgacggctcaattctttatatctatatgcaaagttttttttgtaaaatgttcatatatgcttagtcattcacatatatcatgtagttggtcttgaaccttcaaaccttgattgcaggtgaagaatttgagaccttaattgcacatattaaatttgatgaatacaacgaaaaacaaaatgttcggacaatagagaactaattattctttgaatttcgatactctatttgatttctctctcgagttgctcaaagatctttccttaatgactcgcgagcattttaccatgatttatagtgatgctagtcactttattgcaattttgataaatttagctaattgtgttggcattgattaatctgaagtttagaagtttatggctacaatagatatccatagtttgggcgaccgtcaacccatgactccctaacttgtttggtgcctatagaaatagtagttaaggcccgcttgagttcttattatattattatatctaaggttgtgttaattgaatgttgtaagctatagccttctagatatatcatgttagcaaattatacatgtttcaagccgacgcgacttaaataatattacatagatacttgagttgagagaaggtttagtcataaaattaaattatttgtgctggtgttcccttgttgccttctcttaagtcaaaaaatgagagaaccaaatggataaattcgtttgaaaaagagaattgcataaaaataagcgacagtgttttaagaacagaggctaagtgagtatatgagttgtatatgggtccgcaattttataatactattactatcggaaacaacaaaaaggtgctttttattcacataatattacaatattaaaagaaagaacataggctaagtgaatgcgaagaaaaccattttgatgtttgcatcaaatcgctgattatctcattcagagtcatataaatacatccaatgaactgaacaaaataaatacaggaaattggggatggaagccggatccatgaactgggatatgcattgatcttaagtgatgcctacaaagaaaattgaagcaaaaatattcagttagccggtgcaaaattaatcgatgcaagtaatcaaaacaaactaaccatctgaaagtgttccgcgcgctgatccgctgaaattgaaactgattcactgaagcatcacagaatcaggaatcgaacaaacgcagagcttcacgcattaggggattaggctaaaattgaaactgattgactaaagcatcacagaatcaggaatcgaacaaacgcagattaggcagagaagcaaacacgacaaatcaagagcattgccccgtacctaaattaccggcggcgaacccaccgaacgccgtgctccgagcgcagacaccaccacaacccaccactacgcctcctgctgccacacgcacgggtctcctcttctctctctgctcgcagcgcgcggtcatgtcccgtcgattcctcgcattggatggccaccgtatcactttatggacgggcgttgccgtcgagttattacagtggaaggagttaatccgggccgacggttccaagaagaggaaacgtagagacagaaaggcatgaccactatgctgctactgctgctgctgaggatagggaagggatgtgagagacatgctgggctggaccaatgaattgatgggttgttagagaagggaacatgtgctgcgcttagaccgagcgatctaggacgtgcaagtaatgctgatccgatggctgtaaaatagtgctgacgtggcttcacctggtggctactttataggagtaattgcttatagtgggtaccacctatatagaaagaatggatatgccttctctgtggtggctctaatctctactatataaaagaatctagtgaacgtggtgatgaatctgccaccccctcgagttggtgggatcttctaagcctagataaatggagtatatctgtgcaggtggcttggcctttttttttttggatatttgcttgcaaattttatattctaataagtatatattttcaagttaagaacttacaatatatattttgaaatccattgcattgggctattttgttagtcaccaaaacaaaatatctcctatatatgggctctttcactgatgcattggatggctggcaacctcgtacatctcgatgcttactataaccccgtgaacattgtaacatgtcactacaacctcacacgctatttgctcaatttattgtttgaggagatctagttatttgctcaacttagccactattatagccttatttatgagctattagctgtttggaaagaccgatcgccaaacgtactaattaaaacactacgtccacacaccaatatatccctttgctcaccagtacgatctgcttgtacacatactcaggtgacacgattcagaaacaacgaagggttctgtatcggctaccactactgccactccatcaccgacgcattcggcatggcccagctgctccacaccgtctgccgcctcgcgggcggcgacgacgacggcgagtccctcaacgatccgccggtctgggagagggacctcctcgccgtcgcgccacgacgctcctcgccacgcatcaggcacgtcgtcgagcatcccgcctacgacccgctgcccgtctcatcggccgcggcgaaggacgtcgtgtggacgacaccgcgcgagcagatggtgacccgctacttccacctcggcccgacggagatggcagccctgcgagcccatgttctgtcgtccgccactgtcttcgagctcgtcaccaccgtgctgtggcggtgccgggcggcggcgctggggtacgccgcggcgcagcgcgtccgcgtcctggtcatgtcgagcgcgcgctggagctggaaacgcaatccgccgctgccgcgcggcttctacggcaacttgctcgtcccgcaggtcgccgaggccaccgccggcgagctgtgcggccggccactcgcccacgcggtggagctcgtgcgggggaggaagttcgccgtgacggacgagtacatgcggtccatgctcgacatgctggcgcggcgcggccggccgttcttcaacctggactggacgttcgtggtggctgacgccggtggcctcggccgtagcctgggcgtcgtcggaaggtgggagcgcgccggcggcggcctcacgccggttggacaggcgactgcggcgagcatgtacagctactacgagaggtgcaagattggagcaggagaggaagccgcagtggtgtccatgtgcttgccggcgccggcgatggagaggttcgtgcgggagatcaccggatgctccaacaccagatcagcgaagagcgccatgtagaggcaagtcgggctttgttgggccatgattgtgctactttgtacgggctattgggcaatatcgtgtttaggcagctctataaagcatggccattatcaattgataggagaagatttataatggttgggtggccatgacgggttgtcgaaaaaactcagcaatcagggtgacttctcgatataccaggagggcatagttaggggtattatctacgtaattgtataatagtaagtgtagactaaaaatgattatataatgattattttctt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0133500, RefSeq:Os10g0133500