Os04g0606500

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Revision as of 11:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0606500| Description = Conserved hypothetical protein| Version = NM_001060336.1 GI:115460401 GeneID:4336918| Length = 3718 bp| Definition ...")
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Gene Name

Os04g0606500

Description

Conserved hypothetical protein

Version

NM_001060336.1 GI:115460401 GeneID:4336918

Length

3718 bp

Definition

Oryza sativa Japonica Group Os04g0606500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31040650..31044367

Sequence Coding Region

31040996..31041188,31041304..31041515,31041693..31041848,31042069..31042956

Expression

GEO Profiles:Os04g0606500

Genome Context

<gbrowseImage1> name=NC_008397:31040650..31044367 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31040650..31044367 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttcgaggtttccatcgcatcagcttagcaatggcctgtatgtgtctggccgacctgagcaaccgaaggagaaggccccaaccatttgttccactgccatgccatacactggtggtgatataaaaaaatctggagagcttgggaagatgtttgagctccacgctgtcaagtcaagaaaatctggtccactgagcaatgcaccttcgaggaatgcgtcatttggaggtgctgcatcaaactctggacctgtccctaatgccggggatcggtccaactactctggttctctatcatcttcagttcctggtgctagtggatcagcaagagcaaaatctagctccggacctctcaataagcatggagaaccagtaaagagatcatcaggtcctcagtctggaggagtgaccccaatggcgcggcagaattctggccctctccctcctatgcttcctacaactggacttatcacatctgggcctatcacatcggggccactgaattcgtctggtgctcaaaggaaagtatctggacctcttgattctgctgcatccaagaagacgcgggccacatccttttctcataaccaggctgttactaaaatcaccacagaagacagttactcaatcacaggaagcctttcgaagctaatactcggggcagtgggtgtgctctttgtgttggggctcatagcaggcatcttgattcttagtgctgttcacaatgcaattcttctgatagttgttctggtgctgtttggttttgttgctgcacttttcatttggaatgcttgctgggcaaggagaggtgtgattgggtttgtggatcgctattctgatgctgatctaagaactgctaaagatggacagtatatcaaggttacaggggttgttacttgtggaaatttccctctcgagtcctcgtatcaaagggttccaagatgtgtgtacacttcaactaccttacatgaatataggggttgggactcaaaagctgccaacacccagcatcaccggtttacctggggattacggtcaatggagcaacacgcagtggatttctacatctcagattttcaatctgggctccgggcattggtgaaagcaggatatggtgctcgagtgaccccattcgtggatgaatctgtcattattgacattgatcctgacaacaaagacatgtcccctgaatttcgaagatggctgcgggaaaggaatctctcaagtgatgatcggataatgcgcctaaaagaaggatacattaaggaaggcagcaccgtgagtgtgatgggggttgttcaaaagaatgacaacgtgttgatgattgttcctccaccagagcccatctctactggttgccagtgggccaagtgtgtcctcccaagggacctttatggattagtcctgagatgtgaagatacctcaaatatcgatgtcatagcggtttag</cdnaseq>

Protein Sequence

<aaseq>MGSRFPSHQLSNGLYVSGRPEQPKEKAPTICSTAMPYTGGDIKK SGELGKMFELHAVKSRKSGPLSNAPSRNASFGGAASNSGPVPNAGDRSNYSGSLSSSV PGASGSARAKSSSGPLNKHGEPVKRSSGPQSGGVTPMARQNSGPLPPMLPTTGLITSG PITSGPLNSSGAQRKVSGPLDSAASKKTRATSFSHNQAVTKITTEDSYSITGSLSKLI LGAVGVLFVLGLIAGILILSAVHNAILLIVVLVLFGFVAALFIWNACWARRGVIGFVD RYSDADLRTAKDGQYIKVTGVVTCGNFPLESSYQRVPRCVYTSTTLHEYRGWDSKAAN TQHHRFTWGLRSMEQHAVDFYISDFQSGLRALVKAGYGARVTPFVDESVIIDIDPDNK DMSPEFRRWLRERNLSSDDRIMRLKEGYIKEGSTVSVMGVVQKNDNVLMIVPPPEPIS TGCQWAKCVLPRDLYGLVLRCEDTSNIDVIAV</aaseq>

Gene Sequence

<dnaseqindica>3180..3372#2853..3064#2520..2675#1412..2299#gctcctcctctactccccccccccccctcccccctccccttcttcctctctgtctccagcgcacgcacgcacgaccacctcgcctcctctcctctcccctcccctcccccacctcgcctcgcctccacgcgcgcgacgcggccggcgacggcgagccgcacggcgcgtgggcgtgcctctcctcagccggcggctagccctctcctcgcgcgggggcggcggcggcggcggttgttgctggcctcattccaccgccatccctcctccgtgtctcgggctcgactcggtggtgaaggtatccatgccattccttttctctctcgcagccctctcctccctggtggtggagactggccggctggggcgtgggagtgtctgcgcttgggcttcgttgtgtcggtggagcgagattccggtgggatttgggggggcatctgtcgctgtaactcgtaaggggttgggggtttgacacggtttcgttttttttttaagaaatgttgtttccagtgatgttgtcgtgtctcaaaattattcagaaattttttatgtagatttcttggcgtagtcagttgtttcaggggaggcgcgtctccatgaaatctctgcatgttttacggggctttgcctgtagcctgaaatttggggggagtgggaaaaaaatgtttcaacaaaggcatttcatatcaagttgttttatgctactgaagtgatgatggaagatgtgataggcctaccaaggccggaaaattttccgcgtcatgcatttttcgttgcgagcaaggggcattgtgaggttttggtaactcaaacctgcatcgtgtctctgtttaggagttctcccttccccacgccacccgtctttgtttttggtaatgtttaacctgttacagaaatggaaatagtgaaggatcagtcagctgctaattactaccagtagctgttaggatgccgctgtgccataatgcaaagcataaaaagagatacatgatgtactaagaatgaaaataaagatctgtaattttttttaaaaaaaatccaaaccaaagaagccccttagtttaccttttcttttttttttactgtaattagccctctgtgatgtgtggaagggctgttcatctaaaatctccttgatatttcataatcagtatgtgtgattcttacaattgtttttctttgtttctattagcatactatttgttccaagaggcacacataatataccgatatgcatataatgttcattcgcttttctatttgatgtctttgtcaggtcaggtgctgatgcaagatataggttgttctatgagaaggatagctgtgcacatcaagacccaaatataatctcacttggttgtactatagtggtggttgaacactaagatatagcttattctgttgtttcaaaaacatgggttcgaggtttccatcgcatcagcttagcaatggcctgtatgtgtctggccgacctgagcaaccgaaggagaaggccccaaccatttgttccactgccatgccatacactggtggtgatataaaaaaatctggagagcttgggaagatgtttgagctccacgctgtcaagtcaagaaaatctggtccactgagcaatgcaccttcgaggaatgcgtcatttggaggtgctgcatcaaactctggacctgtccctaatgccggggatcggtccaactactctggttctctatcatcttcagttcctggtgctagtggatcagcaagagcaaaatctagctccggacctctcaataagcatggagaaccagtaaagagatcatcaggtcctcagtctggaggagtgaccccaatggcgcggcagaattctggccctctccctcctatgcttcctacaactggacttatcacatctgggcctatcacatcggggccactgaattcgtctggtgctcaaaggaaagtatctggacctcttgattctgctgcatccaagaagacgcgggccacatccttttctcataaccaggctgttactaaaatcaccacagaagacagttactcaatcacaggaagcctttcgaagctaatactcggggcagtgggtgtgctctttgtgttggggctcatagcaggcatcttgattcttagtgctgttcacaatgcaattcttctgatagttgttctggtgctgtttggttttgttgctgcacttttcatttggaatgcttgctgggcaaggagaggtgtgattgggtttgtggatcgctattctgatgctgatctaagaactgctaaagatggacagtatatcaaggttacaggggtatgtaaaatgctgttgatttatcatatcatcctatcagtcaatactcctgctttattttcagatgagcttcttccagtttagaagattacatatgtatttttttttgagaggggagattacagatgtacagatgttggtacatagattcagtgcatgatctttttttctgagataatatgccaaacaattacttaagttatcatgtctaacttcacaggttgttacttgtggaaatttccctctcgagtcctcgtatcaaagggttccaagatgtgtgtacacttcaactaccttacatgaatataggggttgggactcaaaagctgccaacacccagcatcaccggtttacctggggattacggtcaatggaggtgagttctttttcatgaatgatagatacccattactaagtgggcattgagaataaattgatgcagtcaattacatcatggtatacaggctttattgaagaatattgaactttgagaatttgtttctctgatctctatgtaccttaacctctgacaatcccaatgcaatcatgacagcaacacgcagtggatttctacatctcagattttcaatctgggctccgggcattggtgaaagcaggatatggtgctcgagtgaccccattcgtggatgaatctgtcattattgacattgatcctgacaacaaagacatgtcccctgaatttcgaagatggctgcgggaaaggaatctctcaagtgatgatcggataatgcgcctaaaagaagggtattattttcttatttagttggtttgcacctagaatgcacaagctaaaattgtgatcttcaatgacctggtaaaatatcttagtgaatcactacatttacttcatcacctgcagatacattaaggaaggcagcaccgtgagtgtgatgggggttgttcaaaagaatgacaacgtgttgatgattgttcctccaccagagcccatctctactggttgccagtgggccaagtgtgtcctcccaagggacctttatggattagtcctgagatgtgaagatacctcaaatatcgatgtcatagcggtttagcaagctgggtgttggaacttagaagagctgctgctgaagaagtgctttttaaatgttttgacttggagtttgtttcgtggaatgttagaattgagaaaaatgtacaaatgttggggatgattaaggttagtaaaaatagatgttaagctggggtttggatgtatagtcttttcttgtattttgtcctttcttttcacctattcctcggttatgagcactgaatgcttgtcttgtgaaatatgatggcttggttattactaccatccagctgtttgaagacttagtgaaattgggtaaacaactatatatgtttttttcaactagatgtatcactgctgttaaagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0606500, RefSeq:Os04g0606500