Os04g0607400

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Revision as of 11:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0607400| Description = Conserved hypothetical protein| Version = NM_001060343.1 GI:115460415 GeneID:4336925| Length = 6033 bp| Definition ...")
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Gene Name

Os04g0607400

Description

Conserved hypothetical protein

Version

NM_001060343.1 GI:115460415 GeneID:4336925

Length

6033 bp

Definition

Oryza sativa Japonica Group Os04g0607400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31114716..31120748

Sequence Coding Region

31114717..31115679

Expression

GEO Profiles:Os04g0607400

Genome Context

<gbrowseImage1> name=NC_008397:31114716..31120748 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31114716..31120748 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>actgctagtgggcccccgtgccgctccaggggcaggggcgacacgggcggcgaccaccgccgccttcctccctcctccacctcgccgccgcccgagcagaccgccggaaaccgcgtggctgcgaggaaggcggcggcggggccttccttctccctcgagggcgcgggtcggtgcccacgaccccgaccagttgggggcggcgacggtgcggcggcatcggcgtcggcgtcagggcgttgggctgggcgcgcggaggcgacagggtgcggaacagctgggcggaggcggcttggtgcggaacggcggcggcggcgccggatttggcgtccctcgccagatccggcggtccggtctcctcccgggacgatggtggcacccaaggaggcggggaagggagatgcaggcggcgggaaaggtggagcagcggcaacgcgcgtcgcctctccagatccgggctgggggagtggtcggcgccgaggaggtgcggagaccggcaggcagaggcagcgtcacggtggtcaggcgacaacagcggcggctcgctcccgccgtggtcgcggcgccgccgtcggtgtctgtcaagcgttggtgttggcttcggtaatgctgcggcggcgcgctctagctggtcatcccctgtacctggctggatctggccgtccgcggccggatccatcgcctccacgccgaatggcagctggtcggcgggacggctgcgtgtggacggcaagcgcggcggcggctcgctggcggccagcctcctgctcggcagggggcttctgccggtggtgggtcttgtcgttgttgatgggcggcgatgtgcggatgtggaaatggcaggacgacggcttgtgctggcgtgaagcaggaatggggcttgatgtccgtgacggtgacttcctcattgtcggccgagtgttctccctctcttcggtttccccccttggccggacccttttctag</cdnaseq>

Protein Sequence

<aaseq>TASGPPCRSRGRGDTGGDHRRLPPSSTSPPPEQTAGNRVAARKA AAGPSFSLEGAGRCPRPRPVGGGDGAAASASASGRWAGRAEATGCGTAGRRRLGAERR RRRRIWRPSPDPAVRSPPGTMVAPKEAGKGDAGGGKGGAAATRVASPDPGWGSGRRRG GAETGRQRQRHGGQATTAAARSRRGRGAAVGVCQALVLASVMLRRRALAGHPLYLAGS GRPRPDPSPPRRMAAGRRDGCVWTASAAAARWRPASCSAGGFCRWWVLSLLMGGDVRM WKWQDDGLCWREAGMGLDVRDGDFLIVGRVFSLSSVSPLGRTLF</aaseq>

Gene Sequence

<dnaseqindica>2..964#aactgctagtgggcccccgtgccgctccaggggcaggggcgacacgggcggcgaccaccgccgccttcctccctcctccacctcgccgccgcccgagcagaccgccggaaaccgcgtggctgcgaggaaggcggcggcggggccttccttctccctcgagggcgcgggtcggtgcccacgaccccgaccagttgggggcggcgacggtgcggcggcatcggcgtcggcgtcagggcgttgggctgggcgcgcggaggcgacagggtgcggaacagctgggcggaggcggcttggtgcggaacggcggcggcggcgccggatttggcgtccctcgccagatccggcggtccggtctcctcccgggacgatggtggcacccaaggaggcggggaagggagatgcaggcggcgggaaaggtggagcagcggcaacgcgcgtcgcctctccagatccgggctgggggagtggtcggcgccgaggaggtgcggagaccggcaggcagaggcagcgtcacggtggtcaggcgacaacagcggcggctcgctcccgccgtggtcgcggcgccgccgtcggtgtctgtcaagcgttggtgttggcttcggtaatgctgcggcggcgcgctctagctggtcatcccctgtacctggctggatctggccgtccgcggccggatccatcgcctccacgccgaatggcagctggtcggcgggacggctgcgtgtggacggcaagcgcggcggcggctcgctggcggccagcctcctgctcggcagggggcttctgccggtggtgggtcttgtcgttgttgatgggcggcgatgtgcggatgtggaaatggcaggacgacggcttgtgctggcgtgaagcaggaatggggcttgatgtccgtgacggtgacttcctcattgtcggccgagtgttctccctctcttcggtttccccccttggccggacccttttctagtcatggggaatgctagggggagggcggaggctccggcttgctgtagaagtttgtggcggatagatggcgtttcgagggtggccaagggcccgtcttgccattggttacaatcaaggtatgattgcttctaagacgtcatgaactattctgcggccatcgatgtgggggtgcttgtatgggtgatgtgaagatgctggcgaaagccttgccgtgcttttggcgggttcgacaacgacggcgcccgtgggtgtcgtttccctccttggaggcgttgtcatggcactctttcatatcctcacaaatctctccaggtgaaaaccttgttccgattttcggacgagtggcggcggcgtcacgcgtcgtatcctccttgggggcgtcgcttcggagaagttccaatgcatcgatgactattgatggtccttttcggttcaatagctttcatattttgtgttcggcgaggcttcgccttcttgggtccgcttctttcttgtggtgggcgacacgctcttcggttgtttctgctgatgaagtcgaagttgctcactgatggggtgcggcgacgcttggcaacgatgacatgttgcagtctcttccaaggagttctggtgctggccgtgtgaaggaagtggctcctcagtggcttggctgatgtctattgttggatgccggagccgcttttcgctttggcgattttcgtcttcagtgttgttgcggttgtgaagtcggcgctactaggtcgctggggcggctagctcggcaacgataacacctcttctgcgatgtggaagctgttgtgtcgcttttgtgtttagctttgtggcgacgtcctgcgattgggctccgccgtcgttgttagttgtgtagcggtgggtttgtaattaaccgtgcagttgtatgatttttgggcctagttttccttataaactgggccaattcttttcttctaaatataaaagtgtggaactaagttccgccttaggttttaaaaaaaaaagataactgctagtgggtagcatgagaggtggatcgatctgatggaaatagcaaaaggtagagacccggacctggatagattttagtggtccaaacattctctttcagctagcgtatcttttgtgtgtgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatagtaaatttgtttggtgctccatggtgcccgggcaccattgttgaaattgagtatatacctaattcaaatgagtatgaaactttttcaattacttagatattaacattagctactttactaactagttcaaagcaagtttgaactgaatttgaacttgtttttgttagattttgattctaggtatatagcatccatacatataattagttaggtatgtaatcatggattgtgaaataaagttaaatttgagttgttttgttgataggtataggtatgaatcgagttattataactaggtatatactcacaatttgaaaattttgaaaaatttgagtgattttgtgtatttgataccatggtgcctgggcaccatggtgccccatatgagtgtcctatatagtaaatttgtatatatatatatatacgtatatatatatacacacatatacatatacatatatatatatatacatatacatatacatatatatatgtatgtatatatatgtatgtgtgtgtgtgtgtatatatatatatatatgtatatatatatatatatatatatatatatatatatacatacatacatatatatatatatacatacatacatacatatatatatacatacatacatacatatatatatacatacatacatacatacatacatacatacatacatacatacatacatacatacatatacatacatacatacatacatacatatatgtatgtatgtatgtattctattgggcattatgcttttggacagcaaaagattgatgatttattgttattttttgggtagctttactctgataatgcattgctaaagtgctgatggttagtttgcatgcagccgcaaacaaccatatcaaagagagcgatataatgttactgacgagtgttatagaaaggtagcctggcatattctacattagtaggtcttgtgagttgctttttcttgttcaatgaaaagaaatcttacgacatatactacctctatttttttatttgaagttgattaattcaaaataaaactaaatcagaaaaaagccacgaggaaattagccatgcaactacatacatggtaaatcaaatcggtccgctaacgaagatttaatttaggagttggagctctataaaacatgccgtaaggctttgagctacttggcaagttattcagtgcatataaagcattatgtactggctattgctaccatatatcatgtgtgacaggtgggaccaaatattatttatatcttatatatttatagttaactattgtatgtttcaattgactataaatgatttggagctaggtagctatactattcaacttgctcttagtagagattaatgttgaaaaattaaagactttggccctttattaaatgaggtattggatagtaataaaaggacaattggggtaagatagagaaaaaaaatagtacttcctccgtcccacaatacttgtctttctagcattcaaaagttgtcgcaaaatagttatcacttggaagtactacttatcacatcaaccactttcaattcaaatatcttctcattctaccctcaaccaccatctcacatacaactatacattattatctccgtttcaggttataagactttctatcattgcccatattcatatagatgttaatgaatctaggcatcatacatatctagattcattaatatatatatatgaacgtgggcaatgctagaaagtcttataatatgaaatagataaagtatttattaagagatattatagtttttttctcttaaccttagtacatgctaaacaacctaaaatgacatgtattataagacggaggcaggattactactccataagtaaagtgattgatgggacaatcagtattataaaatatttatatttgtagataaattttaaatgttttaagtacttatatttatattttatatttatatttgtggatagaggtagtacctgatttgcacatgtctggttccctgtatagtttgctcgggcctcgggaagacatgctgagtgcctaaggtgagagaatctttactaaggtccagttcaatctgaattgtgccaggtagcctgtcgcatgtggagacagccaacaaggtgatatttatcgatacatgcattacgagtgatcagacagtagaatggacttctcgtctataataaaaacataaactcgtgaacatgaagaatgttgagttgagttcgttcgacggtattctttgggaaatggtttagccaggtctacaggtcattttggtccaaccaaggaagctgtaggagtaataatattttgacaaaatttgttctaggataattagcttatgttcttgctgctggaaactttaaaaacgtgacggggtctaggatactcataaacatagtaatttactgagggatattgtagccattattttattatttatgagcaaatagagggaaccctgaaaaaaagagatgttttttttaatttgcccctcgagacaacaggttgtaatacaattgtgtgtggtttaaatcagacctaaagccatattcccctcccaatgccctcaccgaaacttagaaattggtggtagcgggaatggcggcagccattacaagctattgccacatgaacaaacttgtcttttctaaatattttttactccatttggcttggaaataatataaaatagtagttgtggtgtctcctagcacattaggaggtttttaggtgtcctataaatgtttcacttttttaggtgttcagtagcaaaggaccatatataaactttaaacgtcttgtattaattttttcctcgtatttttagttcaaggatatgctaaagaaattgctcatagtgctagctaatgatgtcccaattaaatcaaatctagatattacataaaatatgttgctaatttctattggaattgtgcttgtggtgagatccaaataatatatcttgtggtgttgttttctcctgaagataaagatgaagatgaagatgaagattaggattaagattaagttttttacctaaaacgaggtagtattaacgtatgatgattgagttttaattattatataaacttaaaaaatagattaatatgatattttagagaaactttcatatagaaagttttttacgaaaaacaccgtttactagtttaaaaaatatgccaaaaaatcttaatcttcatccactctttttggagaaaagaacaggacattgctcctttgcagctgatgcacattgcacagctaggcgcggccgcgcggataccgttctgccctgcaccactaggccggccggcaacatgttcttcgtttctgtgatcgtcgggactcgagaattggattctccctcacattaggcggacgaacaagccatcccgtccatccaaatcgctggatgcgacgctgcttgaccttctcgtcatcattcatcagtgggctgtctaaagcggttttcttcgtggagggctttcccggtgctggctgcctttacctttcatgagacctggacacatcgaccagcaaggtaaaggtacgacaaaaggaggtgagcaacgttcctccactagcccacgtgtcctctcctgtggctcccacgaccggggtaaccgtgtcacgctgtatatatcctttagagcttaggtttgacactttagtgagactacatatagagcaagttagatggtactagaaaagggaattaccgttggttttattttgaggctgtgtttagttcccttcaaacttctaacttttccgtcacatcaaatatttgatatatgtatagagcattaaatatggacaaaaaaaaccaattacacagtttgtatgtaaattgcgagacg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0607400, RefSeq:Os04g0607400