Os04g0609600

From RiceWiki
Revision as of 11:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0609600| Description = Similar to Protein phosphatase type 2C| Version = NM_001060358.1 GI:115460445 GeneID:4336940| Length = 4259 bp| Def...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0609600

Description

Similar to Protein phosphatase type 2C

Version

NM_001060358.1 GI:115460445 GeneID:4336940

Length

4259 bp

Definition

Oryza sativa Japonica Group Os04g0609600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31273745..31278003

Sequence Coding Region

31274102..31274242,31274566..31274720,31274818..31275100,31275230..31275481,31277608..31277742

Expression

GEO Profiles:Os04g0609600

Genome Context

<gbrowseImage1> name=NC_008397:31273745..31278003 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31273745..31278003 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtcgggcggatggagcggcagtcggcgtcgtcgtcggcgtcatgctccccctcctcctccgccgccggcacctcctcctcgtcttcggcctgcgggggcaagaagcggcccgacatactcaacatgatccggagtgcaacatgccttaattcgtcatctaccgataccggcaaggggaggagtaagcagtcaagcaacaaagtgactcatggattccacttggtggaagggaaatctgggcatgacatggaggactaccatgtggcagagtacaagtatgacaagagccatgagcttggtctctttgccatttttgatggtcacttgggagacagtgttccaagttacttgaaagctaaccttttctgcaacatactgaaagagcctatcttctggactaaccctcaggaagcaattaagaatgcataccgctctacaaacaaatatattttggagaatgccaaacaacttggacctggtggttcaacagcagttactgctattgtcgttgatggaaaggatatgtgggtagcaaatgtaggtgattcaagagctgttgtgtgtgaaagaggtgctgctaatcagctcactgttgaccatgaacctcatacaactaatgaaaggcagaggattgagaagcagggtggctttgtaacaacatttcctggtgatgttccccgggtaaatggtcagcttgctgttgcgagggcctttggggaccaaagcctcaaggcgcacttgagttcagaacctgatgttaggcatgtaccaataaattcaagcatagagttcgtcatacttgccagcgatggactatggaaggtaatgaagaaccaggaagccgtcgatcttgtgaagtcgatcaaggacccccaggcagcagcgaagcgactgacgaccgaagcgcttgcgaggaagagcaaggacgacatctcctgcatcgtcatccgattccgctgctga</cdnaseq>

Protein Sequence

<aaseq>MVGRMERQSASSSASCSPSSSAAGTSSSSSACGGKKRPDILNMI RSATCLNSSSTDTGKGRSKQSSNKVTHGFHLVEGKSGHDMEDYHVAEYKYDKSHELGL FAIFDGHLGDSVPSYLKANLFCNILKEPIFWTNPQEAIKNAYRSTNKYILENAKQLGP GGSTAVTAIVVDGKDMWVANVGDSRAVVCERGAANQLTVDHEPHTTNERQRIEKQGGF VTTFPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPINSSIEFVILASDGLWKV MKNQEAVDLVKSIKDPQAAAKRLTTEALARKSKDDISCIVIRFRC</aaseq>

Gene Sequence

<dnaseqindica>3762..3902#3284..3438#2904..3186#2523..2774#262..396#aacttcttttttctcttcttcttctcctccattccattccatttctcctcacgctaccgccacaggtgtccgcgccgcgagaggcctcgggctcggctggtggtggaagaatcggatcaggagaagcaaaccaagggatagaaattcctccccccagaagatctctcatccccgtgcgctgctgctgctgtgtcgtcgtcgtcgtcgggagtggggagcgagcgagcgagctggtctgtgtccgtggtgattggacaggacatggtcgggcggatggagcggcagtcggcgtcgtcgtcggcgtcatgctccccctcctcctccgccgccggcacctcctcctcgtcttcggcctgcgggggcaagaagcggcccgacatactcaacatgatccgggtatgtttccctgcctgcctgcgtgcgcctcttcttttttttcctacctttttttttctttaatttgactattttgagttgtcttcatgcggttcaattcttggctgcgtagcaaaatttttgattttttttaacttcgtttaccctctttgatgtgctggtgcctgcctgattgaaaggagcttcgtttttttagcatctgattaatatccgtgtttatcgaaacatccactcagttgagcgctcgaggtcacaataggtagtaataattaattaccattaggaaaaaaaataatcattacctttaggggaaaaatcatagtattttgtttttaccggaggaggttaattaaaagctaaacatagtgcaagttgttaacttggagtcacaggatctccaagtatggggttgcaacttccaagcaaagtcggacttgtgcaaccctccgcttcctcctttttgacttagtacgcgtgcgcccatgctgccgtgccagccgtaagcaacttgtactttcttggagccttgctgtgcacctacttaaggaaaaggatatacctagtaacttttttttactaaatttttactaacactgttatgctatgagtgcatctagatttttttgtaacttccatctacttaaatcaaacgattgagatgattgttagtaaaagtttagtaagaaaaatttagtacgtatagcattgctccctacttaagcttgtaaccttgctgtaccaaaccagaccagttcatgcaaatcattagccttatctgtggttatcggaatgatggcggtagttgtcttcaagcaatcagattatgatattagtgcccttgtttttatattttaatgttatgtgtttctgtctgtttatgaacccaaacaagaaagaaaactgtcatctgttcttgcctgccttgggaaagttgcctcttggtgtgtgtagttgataattggtttctcaggatttgattacactgtggttaatgacgtgcaagagtcagtaacttgcggtgctagacacctgttttcacatgcttacgagtgttatgagttcagacctggaccacccgtaaagtagctcttgaagtatccctattgcagatatcgagcagaggttgggggattatcggcatgatcctcaggatttgatcatgtgcgttgtctactaagttaggagattacatcacctttggaaacaaaaaaggatgaatactactcgtctatcgcctatgaagtctaatattacctgcaaattgtgattttattcttgtttgtttttcagttctatgccgtggccccccacttggaccttagaaaatgtcctgttgttcatctaataaatgttttgcagaatattgtttcggaataatatagctgctccttgcatacattataccactttacagatagtgatgttctccgaatagtttggcaataggaaggctagtactggaccatgtgcttttatctaaaaaaaaatatgctattgactatttctgtcaatttgtgcaaaacattttctgacaaaatacattctatgttttagaactacaaaaatggtgaaaatgttatattactattctcagcaatcacaatccgcagtcttcattgatgaaaatggaactttcctgttcctatgaatagtctattactattattttcagggatggattattctccttttttaaatcatggtttgagatttcttacatttgtctatcagcggcaaaaatgttatttgtcatacatagagacaactagacattgctgatttatcaaggtcataacttgtttaccaaaaaaactctgatttgcccacaatttcaaatgaaagttcaaagccaaggaaaatggtgttccacaagactagttttttctgttcttattcattaacacgaacaatactgtgaatgctgctatttgatacgattacaaccttcaaccttgtttgtacagtgaactatttttttctttaagtttttgagaacttgtgcatgctgattttggtgccattttcatggaatcctcacacctcctttcttcattggtcttgtttgggttatcatcagtgtgtactgacattaatttggtttgcctgatttgtgtatggtcttaaagagtgcaacatgccttaattcgtcatctaccgataccggcaaggggaggagtaagcagtcaagcaacaaagtgactcatggattccacttggtggaagggaaatctgggcatgacatggaggactaccatgtggcagagtacaagtatgacaagagccatgagcttggtctctttgccatttttgatggtcacttgggagacagtgttccaagttacttgaaagctaaccttttctgcaacatactgaaagaggtaagcattacttttttggttttttttatgtgcctgcaaaactacgaatatgtgttattgacgttcattccttccatttaccttacaaatgtatcttttgctcaccatttgccttttctgatgttgcagcctatcttctggactaaccctcaggaagcaattaagaatgcataccgctctacaaacaaatatattttggagaatgccaaacaacttggacctggtggttcaacagcagttactgctattgtcgttgatggaaaggatatgtgggtagcaaatgtaggtgattcaagagctgttgtgtgtgaaagaggtgctgctaatcagctcactgttgaccatgaacctcatacaactaatgaaaggcagaggattgagaagcagggtggctttgtaacaacatttcctggtatgatttttgttgttcagctgtctcatcactgttcttggtcagaaaataaaaaagttcatgttacttaataatttattgtatgacctgtttacaggtgatgttccccgggtaaatggtcagcttgctgttgcgagggcctttggggaccaaagcctcaaggcgcacttgagttcagaacctgatgttaggcatgtaccaataaattcaagcatagagttcgtcatacttgccagcgatggactatggaaggttggtactataattccttaaaactcttgcctacattaatcttgtctttttaatgctaagagtttataagcatctccattttcctttcgcttcttctgtccttgtatactgcttgtttttaccatgcttcctctcggagcaaaaatatctattgtttagttaggacctgtacatatcatggtttcttgtgcacttaccatgtggcaaaatgcatgatcctcgtgatctccatgattagtcatcaatctatatttgagtattccgcccttaacaaagtacatccacaaatcagttgctaaatcttatgatcttgctcaactcaggtaatgaagaaccaggaagccgtcgatcttgtgaagtcgatcaaggacccccaggcagcagcgaagcgactgacgaccgaagcgcttgcgaggaagagcaaggacgacatctcctgcatcgtcatccgattccgctgctgaacacccgcttcgcaacattgtctctgcgtttctcttcgttccgattgaatttgtgtggtggtgctgaaaaaagatggtttacctatagtatgtagctgttgtgaacagaccctagagatgagatatgttagcaaggacaaaactggagatgttcaaacttgtgggttcagtagcgagtagtgagtgtgtgcagggtggtggtgggcggtggtgattcgtctgtgcatacatacaccagcataaactgttttatcaatcgaacggggcgtgcaggttgttgccgttgtgtacatacattgttgcttggttttggctgtgagttgtgaaatggtagtagtcccagtcatgtgtcatggc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0609600, RefSeq:Os04g0609600