Os04g0610200

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Revision as of 11:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0610200| Description = Conserved hypothetical protein| Version = NM_001060363.2 GI:297603334 GeneID:4336945| Length = 6465 bp| Definition ...")
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Gene Name

Os04g0610200

Description

Conserved hypothetical protein

Version

NM_001060363.2 GI:297603334 GeneID:4336945

Length

6465 bp

Definition

Oryza sativa Japonica Group Os04g0610200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31326156..31332620

Sequence Coding Region

31330700..31330717,31330793..31330894,31330993..31331298,31331372..31331434,31332375..31332473

Expression

GEO Profiles:Os04g0610200

Genome Context

<gbrowseImage1> name=NC_008397:31326156..31332620 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31326156..31332620 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatcagcagtttacgagcattgacaatggcagaaagctggtatctgatattgatccatccaccaagattaacagtgataaaggagggattattgacaagaagatattgcgaactgaggataccacgtatgaacatactgcagaggccagagagcctgtacaggaacatatgggaggctgcaagcgtgggagatactattgcgacactggtgttaggaagaaggtccagactgattctttgccaaagtcctcccctggttgttccagcaatcacggacaaggacaacctccgatgttcacacatgaacaggtgcaacagatgattaatcaagctctacaagggttaaatgagacatgggagaagaagtttttgtctttggagcaaaacatgcggagcatgtcaaaatcacgcattattctggatggtccgaaaaaggggtcattggcggctgttgcaggggataagcgatgccagctgtcatgccaggacacattagattccgtggacggtgaaaaggatccagcgggggaaggcgaggacgaccccgagaaccaggattatgatgacgatgagcattggagctga</cdnaseq>

Protein Sequence

<aaseq>MHQQFTSIDNGRKLVSDIDPSTKINSDKGGIIDKKILRTEDTTY EHTAEAREPVQEHMGGCKRGRYYCDTGVRKKVQTDSLPKSSPGCSSNHGQGQPPMFTH EQVQQMINQALQGLNETWEKKFLSLEQNMRSMSKSRIILDGPKKGSLAAVAGDKRCQL SCQDTLDSVDGEKDPAGEGEDDPENQDYDDDEHWS</aaseq>

Gene Sequence

<dnaseqindica>4545..4562#4638..4739#4838..5143#5217..5279#6220..6318#gcgcgaagagaaaaaagggggaaaaaaaaccaaaaccctagcgatcgcttcccccgatccatggcgccgccgccggggatcctcgaggtgcggtgcgccgggtgcggcgagaccctggaggtggagcacggcctgacggagttcgcctgccccgactgcggcatggcccaggcgctcccgccggagctcatgccgccgcgcccccgccgcgcgctcccgctccccgggcgcgcgagcgtcgtcccctccgccgtgcccgcccccgccaccgccaccgccgccgcccctcccacgcgcgtctcgtgcgggggatgcgcggccgtcctcagcgtgccgcacggcccggggcggttttcgtgcccgctctgcggcgccgagatcgcgcctccccctcccctcgcggccgtcgtctcagtcgttgccccgccggcagcgatcccgattacctccaatcggccggcgatgacctccgaggtactatccagaatcatttcctcccaggatttccctcgcaatgcatcgttgattattggtttcattaagtgtttatttatactagctcaaatgtgagcaatgtggtgatggtatctgttggccttttgctacaaacttgtgacatgtgaggtgaaactactttctataggttgctagtagcataaccatgcttgtattgtacattgaggactatgtcctgtgtactaagcagtgagattaaatttgattaggaattctgaataagcatgcgtgactttactatcagatcacttggttttagcaaggagtcgctattgtagcattcctgttttaatctcaacaacccgcattttctcatgtttggctaaaaacgctagggatcagcatggccaatatatgggtaccccttgaccagttatagttcaactaaatatattgcatgtattagaaagctgtattttagttgacctaaagtagctcaatgagtacccccatggatgatccatgctcatccctaaagaataacaagtttaaaagttaccagcataaatggtcatttctcatttcgttcgaactgaatgtgtgcatttaaagaaagagtttacctatgcgcaatcatgattggtgcaattaaccagcattgttttttcaagtatccacgaattggaaaaaagtgatgtatttgattcagtcaactttggagaaaagtttaaacacttcaacatttgaataacaacatccctttgcccctttgacctttctattacttccaaagcacctgtggtaccactagtttaatgatcaaccatctataaataaataagtaaagattgcagccactatattctctaactgtcttgagctagaaattagcatgtttgttggatctgcacagttgattgtggtgcatcgaaattataactatggaaattgatcaaatatatattagagctgttacaagtcatgtaagaaatacaattatattggaagtttggaacaaacatgtggtatcattgatcaaagttgacagaattggctgcacttcccatggtgacactttatttagaccaatagtagtatttcatcacagtgtttcatggtgtttttcttctttcaggtgctgaatggaaattcaaatcagccaactcttgctggacaggttcagaagtccattattccagagcaatactacaagcattcttttagagaggagtcattcagttcattcagagttgactctaggacacaaattcctgatgtagggaggttacaaaacgagtgtgttaatccttcagctgatcgagaggagtcacgcacagaaccacctaacgggactatgaccaagcctggcaagaagaaaactacatctgcttctggtccaaaatctcatccagctggaaagttgcaggaagagcatattagtaaggccatccatgcatcaagggctcagggaatgccttcaaactctgtaggaggaggatttcacaatggcatgattgcagtgcacaacaagcagaaaactgggcatatagctgcccctagtgctatcgagcatgagcagataaacactctccatcaagtttgtgacaagcagcagcctggcgaaaattccagtgatttggttcatgtggagcaggtacaggtggcatgcaaagcagtacaaaacaataaaaaaggtaccaagtatacaaaaggaaatcaaaagaggcaaggtaagagtccgttgaattattcaactgagttgcctcatcttaggcgtagtcagcgcttaacaaagggttcgccagaccctattgatattgagcctatccataggatatatgcttccccaaaccaaaatcaatcagaaactccaccaattgagagggcgatagatgatacttaccatatttcaccaaaccagcaccggtatcctcaatcagtctctaataagttggacaatgctgatgcaactactcctgctttgaatcatagtatgcaacaaaaggagagaattccccagtgctacagccagatgtactctccagaaagtaggtgggtacttccaaatcgtagttctaattcatgtcatgagcatgagatgcctaatgaaagctttgatgggattgtccaactcgatagtagtgatgatgaagtgcattcaattccattagagaaccaaaatcaggatatggatggccaactagaacaacaagcttgtgctggcaagaacctttcagagcatggcaggcaaaagaatggcttcattggttcttcaggtgatgccaaacatcatgggggcttgtcctctggaatgggaacacgccaccagatgaatttggctgcttcatgcagccgccttgctgttttattgccagttgcggatgctactccattgcccaccatcagctcaccttcttcatttgaaagtctgtctgtcccactctccggcatgctcaattgtttctgttgagtcctttctaacatgttcttccgcacctgtgcagagctaccagttaactgtagcagtccaacaacaccgcaccagcaccaccaaccatcccccatctattctcaggttcctccctttatctattcttgctgaacctttttatttttctttgggtgatgctgaactttattttcagtttgaggtctgaacgccagtgtgcttgaaaagtggaaagagcagacaaccaagtttcttatagaagttttggcatggtttgatgaaatagggtttgcgttttagcatttgaaattgatgcatcttaataaatgtacatgcaggtttacaaacttgtgatgctgacttgaaaacttgcttgctggtttaaaattgttgatagatattacgtgttcagttccactattattccatgatatatctcaaatgttgtagtgctatgattataattgaattgcaagcagaaagctttctattgtattcaaatggaattcttttgcaatgacctaaggatgtaacatttgcacgtttcatgtgcatccttattttccctgtcaaattcactttataccttatttacccatgatgagcactgacatatcctggatccacacgtcattgagggaataaggggcaaatgagagattgggccaactttcaggggcaaataaggattttatcccatgatttgtgtattgtctgacaccgagcaatttcaggatgcccggaatggtgatatgctgtcagcatctgttagtaaatcatcaaaaaagcgcaggggccgtgcccctgcggtactaatggaaccacgcaaagaagctgacaggcctgtgctgacaccttgtggtgcagagtaagtgttggtgatgtgtatagatttatggaaggttaaataacttgcacattctaatcttcatgtgtatgaaaaattgatttatgcaactagaaactggactgtgcatccatcctgtttgaaggtgacaaccaccctatcccttcttatcaagcagaactatcctggaacctatgtttcagtgggtaccaatggccaaccctgtgagcttgcggttttccattggcaccaatgtccttcagatataagagatactgtattggatgaattccttgtgagtaacttacgggggcatgtttcatactattttcattgagatttaaaagtatgtgtgcttattatttaaaataatgcagaaacgctacaagtggtcccctggccaggaagaggagtgtcgaaagatctttgaccgtaaagcagttagacaattagttaacctcttttgctacgagaagcaaagggtcagagatttgctggcaaaaaaagccaaaagatcttcgacggttgttagggccagtaggtcgttagaagagggcgatggtagggaagattcagaggagcagcatggagatgagtctgttctggtgcttgagcttgatgatccgcttaactggaaaccattcgtccctgaatggatgcaaccaaaatggtgggagaagttgtgtgaccattgggcgaaagatgaagttatgaaggtctcttaccaaaaaaggaagaaccggaatgcaggaaaccccccctgtaatgcttcaggctcacagagcatagccaatgcatcagcagtttacggtaagaactaggaatgcaaatcctacttgttgacatctttctgcattagttaacgagccaggtgtgattttgtagagcattgacaatggcagaaagctggtatctgatattgatccatccaccaagattaacagtgataaaggagggattattgacaagaagatattgcgaactgaggtacctactcctgttacatgtacaatatttgaaaattttgaatctgtgaatagtatcactttgcacatgtcaacttgtactatactctttttttccaggataccacgtatgaacatactgcagaggccagagagcctgtacaggaacatatgggaggctgcaagcgtgggagatactattgcgacactggtgttaggaagaaggtccagactgattctttgccaaagtcctcccctggttgttccagcaatcacggacaaggacaacctccgatgttcacacatgaacaggtgcaacagatgattaatcaagctctacaagggttaaatgagacatgggagaagaagtttttgtctttggagcaaaacatgcggagcatgtcaaaatcacgcattattctggatgtaagtaaaaggcagttatataactcatttaattagcattcatattatttttatttatgtaatccatttgcagggtccgaaaaaggggtcattggcggctgttgcaggggataagcgatgccagctgtcatgccaggtaataatgaaatttgtattctgcctgtacatgtacctttaaagcagagttcagtatttgctagagagatgctatggtgaaagcctgtttctgtttgtcttagtgggcttaaaagtaagtccattgaaaaaggagtggcactaaatttaagctaccatggtctcttgttgataaccagatgctaattgataagtttgtgcgaacaatttaaacaaaacgaaatgataggcaatgtataaataataaaaaaaactgttctaaaaatgattaactgcttacaatgactgcacgagactacgagttagactacccagctggtctggcttatactgaaactcgacactgaccaaaatcaattcaaccagatgtatttttcttgatctcccttgcatgctaacctattaaacttgtccatggaaaattcttttgactgggtggtttagtgtgataaactctagtgcgttgatatggattgttttgctttatgatcatgtacaaatcatggcagagcctcttgtatctagtaattattatgggccaaagcataagctagatgaaaacattggtgattcggtggtgtgtgaaaccttcgatggaccggaggtggttggtccttgctaggggaatagatacttgggttgacaccaagagagatccaatattgcaaaaaaaaaaaaaattctaacatagctgctctattgcgtccatagatgttagtggacatataaatatgcctgctagtatgttaagcatgctccatttggaggtagtaactggtaaggtctcagcttttgtattcaaatttggaacctaacttgcataatttcttgaagcatcaatcgacgatatatgccaatcgctgaattcgccaatgtagctatccggcctttcttagctggagcacaaaacctaaccccagttcactcctgacgctttgcaggacacattagattccgtggacggtgaaaaggatccagcgggggaaggcgaggacgaccccgagaaccaggattatgatgacgatgagcattggagctgagccaaaacgtgagcttgtggtggcaccagattttcgtctcctcggagcacttcccggttgccagcgtgtaaatcatgtacagatttccagcatctgaaagcggttgtctcgatcgcttgctggtcgcttccccatacggcttcggag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0610200, RefSeq:Os04g0610200