Os04g0610700

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Revision as of 11:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0610700| Description = Similar to Potassium transporter 13 (AtPOT13) (AtKT5)| Version = NM_001060367.1 GI:115460463 GeneID:4336950| Length ...")
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Gene Name

Os04g0610700

Description

Similar to Potassium transporter 13 (AtPOT13) (AtKT5)

Version

NM_001060367.1 GI:115460463 GeneID:4336950

Length

5112 bp

Definition

Oryza sativa Japonica Group Os04g0610700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31351027..31356138

Sequence Coding Region

31351374..31351890,31352054..31352576,31352978..31353232,31353429..31353543,31353643..31353695
,31353830..31354090,31354166..31354216,31354393..31354641,31354739..31354967
,31355611..31355961

Expression

GEO Profiles:Os04g0610700

Genome Context

<gbrowseImage1> name=NC_008397:31351027..31356138 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31351027..31356138 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcgtcgtcgtcgtcgtcggcgtcggcgtcggcgatgggcggcggggggatgcggaaggcgccgtcgatggagtggcggtgggtatccacggaggaggacgacgagggggaggaggacggggacacggtggaggcggcggccgcggccgtcggggccgtgggcaggggcgggagcttcgggtccgaggaggaggaggacgaggaggacggcggcggcggcggcgagggggagggggagggcgaggatggggagaagcagaagctgatccgcaccgtgccgtccgtcgactggttcgacgtcgagggctacgaggtctccgtcgcgcagcacatcgaggacagcgaggagtttgattttggcaggacaatgtttcttgcccttcagactcttgctgtggtgtttggagatattggaataagtccattgtatacatttgatgtcatgttcagcaagtatcccattcttggagaggaggatgttcttggagcactgtcacttgtcctttatactctaatttcgatgccactagtgaagtatgtcttagtcgtcctttgggctaatgatgatggtgaaggtggtatatttgcgttgtactctttgatttgcagaaatgcaaaagtgagtctcattccaaaccaagtacactctgagaagaggatgtcgagtttccgactcaagcttccaacgccagagcttgagagatccataaaagtaaaggagaagcttgaatcttcattgctattgaagaagttgcttctaggtctagtgctatttgggactgcaatgttcatatcaaatggagttatcacaccagctatgtcagtgctgtctgctgtcagtggcttgaaagttgggataccaaatgcctcacaaggccttgtggtgatgatttcagttgtacttcttgtaatcttgtatagtgtacagaggtatgccactagcaaaatggggtttgcacttggcccttctttacttatatggttttgctgtctcggaggaattggtatatacaatctcagtacatatggcccagcagcttttaaagcatttaatcctctctacattatttattattttgggaggaatccctttcaggcttggctgtcccttgctggctgtcttttatgtgcaacagggtccgaggcaatctttgcaaatctttcctactttcctgtaagatatgttcagtcaatgtttgcgcttcttgttcttccttgccttgtcttggcctatttaggacaaggcgcttttcttattgcaaaccaaaattcatctgagcagatcttcttctcatccatcccaagtggagttttctggcctgttttcttaatagccaatttagccgcattgattgctagtagaacaatgacgacagctatattccaatgcctaaagcagtcaatagctcttggttgctttcctcgactcaagatcattcatacgtctcggaaatttatggctaagatatacattcctgtcgtgaactggtttttattgttttcctgcttgggctttattctgctgttcagaagcatatatgatgttggcaatgcatatgccatagctgagcttggggtgatgataatggccacagtctatgttacaatcataatgcttctaatttgggaaaccagtattgtgaaagtgttgtcatttgtcatcacattcctctccttagagttggttttcttctcatcgtctctaagtagtgttggagatggaggttgggctctgataatttttgcatctggtattctaatggttatgttcatctggaattatggaagcaaactgaagtatgacagtgaagttaaaaagaagctttcaaaggatttgatgagaaaattggggcccaaccttggtactattagagctcctggattaggcttggtctacagtgagatagtgaaaggagttccggcaatttttggtcattttctgattgcccttcctgcaatccactcgataatcgtttttgtatgcatcaggaatgtaccagtgcccgtggttccccagactgaaaggtttcttttccaacgtgtttgtacaaggggttatcacatgttccgctgtattgcaaggtacggctacaaagataagaaccaggagagccaaagcacatttgagcgccttctgattgaaggcctcgagaagttcatacagcgggaggcagtagagctatccctacaaagtggagacgacatcgactctgacgaggagcctccaaccccatctaggacaatcgtagcgccaaatggtagcctctactcgcttgacgtccctctcctggcagactttgtgccttcggcagaagttattcctgaggccagttgctcaacgcctcagcacgatcctgtggtggattacacacagaaccttgagctggagctcgcattcatcaggcaggccaagcaatctggagccgtctatctcattgacaaccccatcgtcaaagccaggaagaattcctggttcttcaagaagctgatcataaactacttcttcgcattcttgaggaacaactgccgcagggcgatgatgtcgatgagcattccacacacaaatgtgatgcaggtgcgcttgacctcttatgtttga</cdnaseq>

Protein Sequence

<aaseq>MAASSSSSASASAMGGGGMRKAPSMEWRWVSTEEDDEGEEDGDT VEAAAAAVGAVGRGGSFGSEEEEDEEDGGGGGEGEGEGEDGEKQKLIRTVPSVDWFDV EGYEVSVAQHIEDSEEFDFGRTMFLALQTLAVVFGDIGISPLYTFDVMFSKYPILGEE DVLGALSLVLYTLISMPLVKYVLVVLWANDDGEGGIFALYSLICRNAKVSLIPNQVHS EKRMSSFRLKLPTPELERSIKVKEKLESSLLLKKLLLGLVLFGTAMFISNGVITPAMS VLSAVSGLKVGIPNASQGLVVMISVVLLVILYSVQRYATSKMGFALGPSLLIWFCCLG GIGIYNLSTYGPAAFKAFNPLYIIYYFGRNPFQAWLSLAGCLLCATGSEAIFANLSYF PVRYVQSMFALLVLPCLVLAYLGQGAFLIANQNSSEQIFFSSIPSGVFWPVFLIANLA ALIASRTMTTAIFQCLKQSIALGCFPRLKIIHTSRKFMAKIYIPVVNWFLLFSCLGFI LLFRSIYDVGNAYAIAELGVMIMATVYVTIIMLLIWETSIVKVLSFVITFLSLELVFF SSSLSSVGDGGWALIIFASGILMVMFIWNYGSKLKYDSEVKKKLSKDLMRKLGPNLGT IRAPGLGLVYSEIVKGVPAIFGHFLIALPAIHSIIVFVCIRNVPVPVVPQTERFLFQR VCTRGYHMFRCIARYGYKDKNQESQSTFERLLIEGLEKFIQREAVELSLQSGDDIDSD EEPPTPSRTIVAPNGSLYSLDVPLLADFVPSAEVIPEASCSTPQHDPVVDYTQNLELE LAFIRQAKQSGAVYLIDNPIVKARKNSWFFKKLIINYFFAFLRNNCRRAMMSMSIPHT NVMQVRLTSYV</aaseq>

Gene Sequence

<dnaseqindica>4249..4765#3563..4085#2907..3161#2596..2710#2444..2496#2049..2309#1923..1973#1498..1746#1172..1400#178..528#ggttttgtcgctctctctctctctctctctctctctctctctctctctcctgatctctcctcctcctcctcctccatccgcgcctccacatctccacacgcaacacacggagacgaatttttctcctggtcccttctcgcctcgcctcgcctcgcctctcgatccgatcgggatactatggccgcgtcgtcgtcgtcgtcggcgtcggcgtcggcgatgggcggcggggggatgcggaaggcgccgtcgatggagtggcggtgggtatccacggaggaggacgacgagggggaggaggacggggacacggtggaggcggcggccgcggccgtcggggccgtgggcaggggcgggagcttcgggtccgaggaggaggaggacgaggaggacggcggcggcggcggcgagggggagggggagggcgaggatggggagaagcagaagctgatccgcaccgtgccgtccgtcgactggttcgacgtcgagggctacgaggtctccgtcgcgcagcacatcgaggacagcgaggtgaggggcctctggcttgcggtttgatttacttcggtttgctttttttttctttttctttttctttcgtgcgtgtgcttgtgcgtcatttggtgcgagagatttggagaatgatatggctgtcacggtatgattaaagttgatttgcccatgcgattagaatcatgaggaaaaatggcaacgattaggcatgtgtactagttacttttggtttaaccttgtgttggacgacaatgagaatggtttgcaattgatcagatgcctaagggagatgtgatgttcatgatcttgtgcgatcaactacaccgattgtctgacaaatcacctgccttttcttttaaataaaaaactacactaattgtttgaacatactcatctagaaaaaaaaacattttgaagattcatccaagtaactgcgatttttcagggaagggaacattttgaagactcatcagctgaataatatttgcaaacatcctttcaaaaaaaaaaattgcaaacacccgaacgatgggatattcttatggtacatcgaaataattgtacctagatcctgaaatgtacacgctactttgaaaaaccagctagcattattgatgatgtttccttaattatcttccatatggtttatttacatgtgcaggagtttgattttggcaggacaatgtttcttgcccttcagactcttgctgtggtgtttggagatattggaataagtccattgtatacatttgatgtcatgttcagcaagtatcccattcttggagaggaggatgttcttggagcactgtcacttgtcctttatactctaatttcgatgccactagtgaagtatgtcttagtcgtcctttgggctaatgatgatggtgaaggtatatctgaggttgtgaatttagtttgtcatgttcagtcttgtataatgactaagttagaacattaacatctttcagtgattccatgactctacaggtggtatatttgcgttgtactctttgatttgcagaaatgcaaaagtgagtctcattccaaaccaagtacactctgagaagaggatgtcgagtttccgactcaagcttccaacgccagagcttgagagatccataaaagtaaaggagaagcttgaatcttcattgctattgaagaagttgcttctaggtctagtgctatttgggactgcaatgttcatatcaaatggagttatcacaccagctatgtcaggttatttcctttctccttttcctttttatgttcttcatgttcaagtatttgttactgggtagatcataaagaatacacaagacatcaaatggatactttacacttgtgtttatattaaaatctcctctcctaggagtgctattagttaatatttaactctttattcttgaatgcagtgctgtctgctgtcagtggcttgaaagttgggataccaaatgcctcacaaggtgatcctttagatccctgtatctgatagcacctaagcaaactatttatttaactccactaaatgttatttgcaggccttgtggtgatgatttcagttgtacttcttgtaatcttgtatagtgtacagaggtatgccactagcaaaatggggtttgcacttggcccttctttacttatatggttttgctgtctcggaggaattggtatatacaatctcagtacatatggcccagcagcttttaaagcatttaatcctctctacattatttattattttgggaggaatccctttcaggcttggctgtcccttgctggctgtcttttatgtgcaacaggtaaagatcataactagtcggcccatcatcagttacaattgatttccatcagcagtatgctattttaagaaggaatattcaactctttcttttgctaaaagaaacttgatacacttatccaaaacatattgcagggtccgaggcaatctttgcaaatctttcctactttcctgtaagatatgttcaggtatcgtcttgctaatatttcttttcttgtcacctagatatactcaatgtaaccactctctgtgattatatttaaatccatcttattcctcctttgcagtcaatgtttgcgcttcttgttcttccttgccttgtcttggcctatttaggacaaggcgcttttcttattgcaaaccaaaattcatctgagcagatcttcttctcatccatcccaagtaaggcagatattgctgaacatttacccattcttttttaattgaataatctcaatcgacgtataatccttatattttgaaaaaaaatatatattagtgattacattgactgttttttcttcaataattttagccgataccaagtattccatagcacttagatactttggcttactacgcgttgttttcgttgcaggtggagttttctggcctgttttcttaatagccaatttagccgcattgattgctagtagaacaatgacgacagctatattccaatgcctaaagcagtcaatagctcttggttgctttcctcgactcaagatcattcatacgtctcggaaatttatggctaagatatacattcctgtcgtgaactggtttttattgttttcctgcttgggctttattctgctgttcagaagcatatatgatgttggcaatgcatatggtaatcctatatacttgtatagttcatccccactaagtgtagttaatgttatctctcttctatcattaagccacatcaccttaattatttctagccattggatgatagatctatggttcaaattgtctcttctttcttctctcataacaccaagtaatctcaattttttaggcctcaaaattcataagtatcaatttgttttagttttaatattcgtatttaatcttatttgtgcatattatgcaacttaatttccctcagcaatgtggcagggtattcatctagtaataacttaattatatggttatactttttagtgcaaatctgtctatttatctgctttttaataagttgtaatgctcagtgttctacatgcgcttaccctgttccatattgaacagccatagctgagcttggggtgatgataatggccacagtctatgttacaatcataatgcttctaatttgggaaaccagtattgtgaaagtgttgtcatttgtcatcacattcctctccttagagttggttttcttctcatcgtctctaagtagtgttggagatggaggttgggctctgataatttttgcatctggtattctaatggttatgttcatctggaattatggaagcaaactgaagtatgacagtgaagttaaaaagaagctttcaaaggatttgatgagaaaattggggcccaaccttggtactattagagctcctggattaggcttggtctacagtgagatagtgaaaggagttccggcaatttttggtcattttctgattgcccttcctgcaatccactcgataatcgtttttgtatgcatcaggaatgtaccagtgcccgtggttccccagactgaaaggtttcttttccaacgtgtttgtacaaggggttatcacatgttccgctgtattgcaaggtatgctatatcttacttgaagtttagctccgtccttataagcattttgcagttttgtcatgcgaaatagttactgatgtagtttctcctggagttaatttgtctccaagtatgtgtagtcgtcacaaaaagcttatgatggtgttaacttggatgagtgtaggtacggctacaaagataagaaccaggagagccaaagcacatttgagcgccttctgattgaaggcctcgagaagttcatacagcgggaggcagtagagctatccctacaaagtggagacgacatcgactctgacgaggagcctccaaccccatctaggacaatcgtagcgccaaatggtagcctctactcgcttgacgtccctctcctggcagactttgtgccttcggcagaagttattcctgaggccagttgctcaacgcctcagcacgatcctgtggtggattacacacagaaccttgagctggagctcgcattcatcaggcaggccaagcaatctggagccgtctatctcattgacaaccccatcgtcaaagccaggaagaattcctggttcttcaagaagctgatcataaactacttcttcgcattcttgaggaacaactgccgcagggcgatgatgtcgatgagcattccacacacaaatgtgatgcaggtgcgcttgacctcttatgtttgattgccgaatggtaccctttccgacacccttttgttttgttcgttgctatcaagtagagataacactaactagagaagaatggcattgcaaagagaagaagagtatagttgcacctctagcattattcaggaagggataacatctgttttaggaatccacgtctcctgtaatttttgtacaattgcgaaatgtatctgcaagcaaatgttgtgtagcaaacacatcagagtgtggtgagctaacatgtgtattcctgtgtgaggaagagattcttttgccatgtactagacaaggtactcgttttgagtttttgagtaaaaattttgatatctacaagtgttaacaac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0610700, RefSeq:Os04g0610700