Os04g0610800

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Revision as of 11:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0610800| Description = Similar to Coproporphyrinogen III oxidase (Fragment)| Version = NM_001060368.1 GI:115460465 GeneID:4336951| Length =...")
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Gene Name

Os04g0610800

Description

Similar to Coproporphyrinogen III oxidase (Fragment)

Version

NM_001060368.1 GI:115460465 GeneID:4336951

Length

3364 bp

Definition

Oryza sativa Japonica Group Os04g0610800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31360555..31363918

Sequence Coding Region

31360556..31360846,31361671..31361746,31362110..31362204,31362346..31362429,31362711..31362798
,31363102..31363226,31363304..31363402,31363616..31363690

Expression

GEO Profiles:Os04g0610800

Genome Context

<gbrowseImage1> name=NC_008397:31360555..31363918 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31360555..31363918 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatccgccgcgtgcagggggaggtgtgcgcggcgctggaggaggccgacgggagcggcgcccggttcgtggaggacgtgtggtcgcgccccggcggcggcgggggcatcagccgggtgctccaggacggccgcgtgttcgagaaggccggggtcaacgtctccgtcgtgtacggcgtcatgccccccgacgcgtaccgcgccgccaagggggaggccggcaagaacggcgcggcggcagatggccccaaggctgggcccgtgcccttctttgccgctggcattagctcggttcttcaccccaagaacccatttgctccaacattgcattttaactaccgctattttgagacagatgcaccgaaagatgctcctggtgcaccaaggcaatggtggtttggaggtggtactgatttgactccttcatatatcattgaagaggatgtgaagcatttccattctgttcaaaaacaagcgtgtgataagtttgacccaagtttttacccgagattcaaaaaatggtgtgatgattatttctatattaagcaccgtaatgagcgtcgggggcttggtggaatattttttgatgatcttaatgactatgatcaagaaatgcttctcaactttgctacagaatgtgcggattctgttgttcctgcatacataccaatcattgaacgccggaaggacactccatttactgaggaacacaaggcatggcaacaactgaggagaggtcgctatgtggagttcaaccttgtatatgatcgcggtaccacatttggcctcaagactggggggaggattgagagtattctggtttctcttccactgactgcacgatggcagtatgatcatacacctgaagagggaactgaagaacggaaacttcttgacgcgtgcataaacccaaaggaatggctcgatctctga</cdnaseq>

Protein Sequence

<aaseq>MIRRVQGEVCAALEEADGSGARFVEDVWSRPGGGGGISRVLQDG RVFEKAGVNVSVVYGVMPPDAYRAAKGEAGKNGAAADGPKAGPVPFFAAGISSVLHPK NPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPSYIIEEDVKHFHSVQKQAC DKFDPSFYPRFKKWCDDYFYIKHRNERRGLGGIFFDDLNDYDQEMLLNFATECADSVV PAYIPIIERRKDTPFTEEHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSL PLTARWQYDHTPEEGTEERKLLDACINPKEWLDL</aaseq>

Gene Sequence

<dnaseqindica>2..292#1117..1192#1556..1650#1792..1875#2157..2244#2548..2672#2750..2848#3062..3136#catgatccgccgcgtgcagggggaggtgtgcgcggcgctggaggaggccgacgggagcggcgcccggttcgtggaggacgtgtggtcgcgccccggcggcggcgggggcatcagccgggtgctccaggacggccgcgtgttcgagaaggccggggtcaacgtctccgtcgtgtacggcgtcatgccccccgacgcgtaccgcgccgccaagggggaggccggcaagaacggcgcggcggcagatggccccaaggctgggcccgtgcccttctttgccgctggcattagctcggtaaggcacaattactggttcattttgagtgagaattttaggtgattttgcagttctagtcattgcattgccgtcagagatttggatttcttagcatcaggggtagtacactacactacgattccattcttcagctttgttggcatccgagattccgagtgcaagtgaactgtttaggtggtcagtaaaatttgggagtctttacatcgcagttgtgtgaatgatttggctattgtgggtgtttactgttcacaatgtccatttttaaacttccatgtgctgtttgacaataacaaacagttgttgagaaggaagtgtttgctagattagtgtttgcttttctgtttgaaatgtagtgatgtcattgctatcttattgtgagaacttgaaatgcataactttgaatttggatatgtagttaagcatttgaatgatgaatttagatgagcccgatattctatcgtcttcctgtatattctcataagagactaggaattctcatatatcggaaaattatgtttttaagaaatttggaacatgctgcattttgttagatgcttcagcttcagccatcatttgaagaactgcggtgaccatgtttgccatgcctgtgcaatatttcctactgtctcttgtatcccaagcactggtgactggtccactgtcttgtgctactgtttatgtgctactaattggaccagtagagttataaagagctagatctttagccaaactttgtatttttgttccacgattaaacacactcactcttgtttcaacatatcatacctttccagtaatggaattattccttttatctgcaggttcttcaccccaagaacccatttgctccaacattgcattttaactaccgctattttgagacagatgcaccgaaaggtatttgtgcgaacaatatacactgcataattttagtttcatcaagtgtaggtcaatcttagcaatttttatgattactttctttttccgcctgcagttgatatgttctctgttctatcctctttaaatcttttgtttagatatacatgtgaatgaagctagattttttttttgaaaaaaaaactggatatctgtatgagacatagagcaattctatttacagtaatgagtaaatataaaactcttaacattctcctatatattacgattaatttacatttggttggccatttaaaccacctttattatcaggaactgcgaatctcatcatgcagattattaattcataatgctctactgcagatgctcctggtgcaccaaggcaatggtggtttggaggtggtactgatttgactccttcatatatcattgaagaggatgtgaagcatttccattctgtatgtaacagttcctgcacatttcaaagccatatgtcctagactcctaggatcaagagttttatttccctcacgtagccaaaacactgttatttgctacttcgtatacatggaactcatttaatttttatgccttttcaggttcaaaaacaagcgtgtgataagtttgacccaagtttttacccgagattcaaaaaatggtgtgatgattatttctatattaaggtacattcagtttcttattgcgtgctatagcaattaagaaaggttctttaatctctgcatatgctgcctttatttggacacttcaattctactatttttttacatcattttctttgataatttatcattgatcttgtgccttcatggttttcactgtaaattagtatttctgaagacagttgttaccttgtttgaataattggaactttggatgaagcaaccattttttccctacattttgttccctgtgttgaatattcatggtttgtccttcaatgcagcaccgtaatgagcgtcgggggcttggtggaatattttttgatgatcttaatgactatgatcaagaaatgcttctcaactttgctacaggtaaaagtccttactagaatgaccacacaaacttaattttatgaattagcttgtagagatgtgccggaaccggtctttcataagacagggatttctgtcagtttgtttcaggaattagttcagatagcagggatatatacatgctcttcctcttttagtatctaattgtttgagccttttttcaaacccaagtggcactactatattgatgttggatgacccagtgaacactggttaaaatggacccaatgtttaagttttcgttctctatgttgacaaacagattgttttgtctatctacagaatgtgcggattctgttgttcctgcatacataccaatcattgaacgccggaaggacactccatttactgaggaacacaaggcatggcaacaactgaggagaggtcgctatgtggagttcaaccttgtaagtgatcttagatgaacacagctagagtctcactgcagtatctgtttctgattccagtgttgcttcttgtgaaggtatatgatcgcggtaccacatttggcctcaagactggggggaggattgagagtattctggtttctcttccactgactgcacgatggcagtatgatcatgtaagctaaaatgctcctttgccttgccaattcaataaacatcaaagtatttcatgctttcagctttaaaacaatacaaaatttaatatcaaatagtgagcatatactgttgaatatgatatattctcggcaaagatcatgttacatgacacattttcatcctcggggagtcagtcaggcaggcaggtttcctaatgtgccatttacttgcagacacctgaagagggaactgaagaacggaaacttcttgacgcgtgcataaacccaaaggaatggctcgatctctgaacagcttgatttcgttcgttcgtccaatcgtttgttagctttcctcgcactctgtagccttacgatctccaaacatgtgtagttcttttacttgtagaatcctgaataagtgtatgatgcaatgcgggtgttttgtttcatctgtcgatgctgttgagctttgtaactgtggtatcagtttctctctttttttcgagtgaatgaaatatagccggtgagccttttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0610800, RefSeq:Os04g0610800