Os04g0611500

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Gene Name

Os04g0611500

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001060374.1 GI:115460477 GeneID:4336958

Length

4328 bp

Definition

Oryza sativa Japonica Group Os04g0611500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31406045..31410372

Sequence Coding Region

31406246..31406410,31406508..31406639,31406872..31407042,31407138..31407239,31407320..31407424
,31407732..31407903,31408533..31408597,31408796..31409119,31409346..31409463
,31409545..31409628,31410089..31410220,31410331..31410371

Expression

GEO Profiles:Os04g0611500

Genome Context

<gbrowseImage1> name=NC_008397:31406045..31410372 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31406045..31410372 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>actggccgtttatttttctgcaatcttccatatgcaactactgaaggtgatttagtggagctgtgtagccaatatggtgatgttgatcaagcacgtattgtcgttgataaaaccacaaagctatcaactggaagaggttatgtgctctttagccttccagactcagcagtcagggcacttgaattggacaactcaagttttcaggggcgacttttgcgtgttaaggctgctaagccactaaataataaaaagattgaatctagttacgaagagaagaaaatgagtctcaaacaacaaaagttggatcagaggaaagcttctgaaatcagtggggatacgagagcttggaacagcttttatatgcgccaagatactgttgctgaaaacatagcaaggaagaatggaatcagtaaaagtgaattacttgatagagaagcagatgaccttgctgttcgtattgctcttggtgagacacatgtcattgcagagaccaagaaatatttatcaaggtctggagttaatgttgctgcactggaagagcttgcttccaaaagaaatgagaagtttaaaagaagcaaccatgtgatattggtaaagaacttgccatatagttcttgtgaggaagatcttgccacaatgtttcgcaaacatggaagcctggataaaatcatcctccctccaaccagagtgtttgccttggtagtttttgttgaagcgacagaagctcggcatgctttcaaaaagttactgtacacaagatacaaggatactccactgtatttggagtgggcacctgaaaatattttatctcccacctcagcacctgtggaagatgatgagaaggatgttgttggtgacaggattgttactaaagcaattgtagagcaaactgtggaaggagtgagtgctgaagagattgatcctgacagggtggagtcgcgatctgtatttgtcaagaatttgaatttcaagacatcggatgaatccttgaagcagcatttcagcacaaaattgaagagtggaagtcttaaaagtgcaacggttaagaagcacattaagaatggcaagaatgtttcgatgggatttggctttgttgagttcgactcagttgaaactgcaaccagtgtctgcaaggatctacagggaacggttttggatggacatgctttgatcttgcaactgtgtcatgggagaaaagatggtcagactaagaaaaatgaaaaggataagagttcaacaaaactcctcgtgcggaatgtagcatttgaagcaactgaaaaggacttgcggcaattatttagcccatttggccagatcaaaagcctcagactgcctatgaagtttgggagtcacaggggtttcgcatttgttgaattcgtcacaaagcaagaggcgcagaacgctctccaagcacttgcgagcactcatctctacgggcgacatttggtgatcgagcgagctaaggaaggagagactcttgaagaactacgagcgaggaccgctgctcagtttgttgatgaacagagtggtttccagaggctatccaagaagagaaagcaaaccagccttgtggacgaaggctctgttaagttttcaaggatagtagaatag</cdnaseq>

Protein Sequence

<aaseq>TGRLFFCNLPYATTEGDLVELCSQYGDVDQARIVVDKTTKLSTG RGYVLFSLPDSAVRALELDNSSFQGRLLRVKAAKPLNNKKIESSYEEKKMSLKQQKLD QRKASEISGDTRAWNSFYMRQDTVAENIARKNGISKSELLDREADDLAVRIALGETHV IAETKKYLSRSGVNVAALEELASKRNEKFKRSNHVILVKNLPYSSCEEDLATMFRKHG SLDKIILPPTRVFALVVFVEATEARHAFKKLLYTRYKDTPLYLEWAPENILSPTSAPV EDDEKDVVGDRIVTKAIVEQTVEGVSAEEIDPDRVESRSVFVKNLNFKTSDESLKQHF STKLKSGSLKSATVKKHIKNGKNVSMGFGFVEFDSVETATSVCKDLQGTVLDGHALIL QLCHGRKDGQTKKNEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGS HRGFAFVEFVTKQEAQNALQALASTHLYGRHLVIERAKEGETLEELRARTAAQFVDEQ SGFQRLSKKRKQTSLVDEGSVKFSRIVE</aaseq>

Gene Sequence

<dnaseqindica>3963..4127#3734..3865#3331..3501#3134..3235#2949..3053#2470..2641#1776..1840#1254..1577#910..1027#745..828#153..284#2..42#gactggccgtttatttttctgcaatcttccatatgcaactacgtatgttattgcttgtcctttctgagatcagtgtttgtgtgtcatatggaataatcgaagctatggctgcctgattattcttaaaagagtatttttgtgtatgatttcagtgaaggtgatttagtggagctgtgtagccaatatggtgatgttgatcaagcacgtattgtcgttgataaaaccacaaagctatcaactggaagaggttatgtgctctttagccttccagactcagcagtcaggtaaatttggtcagcaagtttatgatttcaaatgtagatgaacttattgttgtttagcttactgctgataatttaatccattactgttggccactcttataaatgagacgcatattgttcagtagcagtttatactcacaccctgtattctgctagccctctatgtacttggttgtacagaattattaggaaggaatgaaattagaaggaaaaaagaggttaacaatgtcttgtatttgcctcaaaccgttggcatttataatccaatgcttaattgtgatggactaaatctggaacagtgtaacactgatttagctcacaaaaaaaaatacacttctgcaaacttcaggaatcagaacataatttaaatgattgaatagaacaaaaaagtatcacaaaatattgagactatccttgattcttatgtgtttggcttggctaatatttttttgccttgtagggcacttgaattggacaactcaagttttcaggggcgacttttgcgtgttaaggctgctaagccactaaataataaaaagattgagtaagaaaagaagtttcccttgtggccattcttctcttcaattaattattcaataattaaaatttgttttaaaattttcagatctagttacgaagagaagaaaatgagtctcaaacaacaaaagttggatcagaggaaagcttctgaaatcagtggggatacgagagcttggaacagcttttatatgcgccaagatactgtatgttaatgtttgataccttgatgtggatttactgcattttgcttgtgttcaacgttttttcattgacatggtttgtacttagctactaattttaccctatactgcattcaaatatttccttgtatcctttttagggttaggatagttttgctgaattttgaaaaaaaaaaaacaatcaaactctcgtgtatcatgctaaccgatcaaactcattcacatttaggttgctgaaaacatagcaaggaagaatggaatcagtaaaagtgaattacttgatagagaagcagatgaccttgctgttcgtattgctcttggtgagacacatgtcattgcagagaccaagaaatatttatcaaggtctggagttaatgttgctgcactggaagagcttgcttccaaaagaaatgagaagtttaaaagaagcaaccatgtgatattggtaaagaacttgccatatagttcttgtgaggaagatcttgccacaatgtttcgcaaacatggaagcctggataaaatcatcctccctccaaccagagtgtttgccttggtatgtaactatttctgcttattttgttcaattgttcattggtcattggtcattatatcatgacacttttgagtgtttgagtgtcctacattactgtctggaatgtttcacttttgtatttcttttgctctacaaattaccaagtgaacattattacctgtattgcgaataatttcaccccttgagtttgtatgtcaggtagtttttgttgaagcgacagaagctcggcatgctttcaaaaagttactgtacacaagatacaagtaagtatctgcaatagtgctagtccacatctaatactcttaatgactagtttgaatacagttttattgagcttttaggataaatcaatgtagtaaattttctgttaagatagaataatgcatgatagttaacatattttctttaaataaattaggcagccatcgatatttacttcaagaatgaggggttttctttagtttgttttctccattcttaatcgacttttcatatgcatgtgcctggtaatctaagttaaagtttgcctaggaactgaaagaaaaaacccattatcgacgttgatacagctagatcctatttgcactggcatgcatgtcgcaagagagagagatgcatattcatatctgatacttgtattttagtagcatgagagacgcatattcatacttgatgcttgtattttagtctatttgatctaagggtgttgtaatgctttctagttatagatcgatatgctctctatggaattataccctgtcatccttatggtttattttttttatgttttattattctgactttttgtgaatgttatataattctagctattagtgtgattgtgaaatctgcacatgtatatttcctaagttggtgttactatttactgcagggatactccactgtatttggagtgggcacctgaaaatattttatctcccacctcagcacctgtggaagatgatgagaaggatgttgttggtgacaggattgttactaaagcaattgtagagcaaactgtggaaggagtgagtgctgaagagattgatcctgacagggtggaggtttggaactttctcttgacttaaatctttattataaccatctcttaactgtcactgactcccgtgtggccatgtccaagttggattttggcatttgtgttcaactgttcatgtctgaataacactcggtgttccttatatacttggaccgcttttactgtatgatgctagaggctgtttcgtgttttcttgtggttgcacctgcctgcgagtttttgtggctgcatgtgcaagcctttaaatatcatctatttgctttaggcccaaataattacaaatcttagtaacacacaactgtccattgcagtcgcgatctgtatttgtcaagaatttgaatttcaagacatcggatgaatccttgaagcagcatttcagcacaaaattgaagagtggaagtcttaaaagtgcaacggtatggttgcaatgcttatgggcattgaatggagttttccagatctcattctcaaacatctttgttggatatctctacaggttaagaagcacattaagaatggcaagaatgtttcgatgggatttggctttgttgagttcgactcagttgaaactgcaaccagtgtctgcaaggatctacaggtacccctcccacccttcgttttcctctcttctctcttttccgcaccatgatctctgttgatgttcagcctgctgtatgttgtgtgtgttaatagggaacggttttggatggacatgctttgatcttgcaactgtgtcatgggagaaaagatggtcagactaagaaaaatgaaaaggataagagttcaacaaaactcctcgtgcggaatgtagcatttgaagcaactgaaaaggacttgcggcaattatttagcccatttggccaggtaattgtccttttgtgtccaggatagtagtctgtggaataaaatttaatatcacgcaacaatatatcatgaaaatagtaaaacacctatcatgttcatgctttctgttctcttcgatagacaaaaaggagttagctgctttcaggttgatcaatgcttatgttttcaggttgagaacacaaggaattttctcttgtttgtgcttacgtgtatcgatggaacataatttcagatcaaaagcctcagactgcctatgaagtttgggagtcacaggggtttcgcatttgttgaattcgtcacaaagcaagaggcgcagaacgctctccaagcacttgcgagcactcatctctacgggcgacatttggtaacggatcaaacatttcctcttcgaactaacctaccatatactgcagtgcaatgcgatgaaatttgtattttgaccttcctgcggttgcattcaggtgatcgagcgagctaaggaaggagagactcttgaagaactacgagcgaggaccgctgctcagtttgttgatgaacagagtggtttccagaggctatccaagaagagaaagcaaaccagccttgtggacgaaggctctgttaagttttcaaggatagtagaatagtgttgtgtgtggatcgcgaggtaacaaaattttgatcgtgttgtagtagtattattgtagaatgataatcattcgtataaggtaatgcaatgcaagtgcgtcctagataccacttagaagttcaactgattcagttgttaatgaagtgatgccacaaatcaggcgttcaagattcaaagttattaggaagattgttgatct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0611500, RefSeq:Os04g0611500