Os04g0612100

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Revision as of 11:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0612100| Description = Similar to Beta-1,3-glucanase-like protein| Version = NM_001060378.1 GI:115460485 GeneID:4336963| Length = 2334 bp| ...")
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Gene Name

Os04g0612100

Description

Similar to Beta-1,3-glucanase-like protein

Version

NM_001060378.1 GI:115460485 GeneID:4336963

Length

2334 bp

Definition

Oryza sativa Japonica Group Os04g0612100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31439779..31442112

Sequence Coding Region

31440102..31440133,31440939..31441896

Expression

GEO Profiles:Os04g0612100

Genome Context

<gbrowseImage1> name=NC_008397:31439779..31442112 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31439779..31442112 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggcgagagctctgatgaggcgaagcaggaggaacacgctgctgaacgcgctgtacaagctcaacttcatcaggacggtggagccgatgcagctgccttcttcgtctccttctccggcgaagccggacggcgacgcggcgagcctcgccgacgccaccggcgacggctcgagctcgccgtactgcgtcaaccctccgaacgcgcccccgtcgtcctccaccccgacaacgacaccgacgccgacacctcccttcgcctcgacgccgttcgccccggacgaccagcccccgccgctgccccccatcggcggcttcacgccaccgtcgttcgagccgagcccgcctgcgtcgtccacgcctggcttcaccccgagcacgcctgggtctgccccaccgagcccgatcttcgtcgtgcccagccctcccgagaccggacccggcggcggcggtttaggtggcggcagcggcggcgagggcggcggcggtgtaggtggcggcagtggagcgaggcggtgcggtggtggtgtaggtggtgggctggcggcggcggcagtggcggcgagggtggtggcggtggcggcagtagcggtggaggcgggagcaatggtggaggcgggagcagcggaggaggcgggaacagcggcggcgggggaggagggggagggttcttgccgccgatagtgtaccgccgccgcncgcgcgnnggcccgggggcgggggaggcgctgtggtgcggtgcgaagccgacggtgccggacccgataatgcaggaggcgatggactacgcgtgcgggtcgggggcggagtgcgggtcgatccagccgagcggggcgtgctacacgcccgacaccgtgctcgcccacgcctcctacgccttcaacagctactggcagatgaccaaggccgccggtggcacctgcgacttcggcggcaccgccaccatcgtcacccgtgacccaagctatgaaaagtgccaattcgacctactatga</cdnaseq>

Protein Sequence

<aaseq>GESSDEAKQEEHAAERAVQAQLHQDGGADAAAFFVSFSGEAGRR RGEPRRRHRRRLELAVLRQPSERAPVVLHPDNDTDADTSLRLDAVRPGRPAPAAAPHR RLHATVVRAEPACVVHAWLHPEHAWVCPTEPDLRRAQPSRDRTRRRRFRWRQRRRGRR RCRWRQWSEAVRWWCRWWAGGGGSGGEGGGGGGSSGGGGSNGGGGSSGGGGNSGGGGG GGGFLPPIVYRRRXRXGPGAGEALWCGAKPTVPDPIMQEAMDYACGSGAECGSIQPSG ACYTPDTVLAHASYAFNSYWQMTKAAGGTCDFGGTATIVTRDPSYEKCQFDLL</aaseq>

Gene Sequence

<dnaseqindica>1980..2011#217..1174#atcagtggctactggccccagtgcagctgcagctagctagacatggctcgcaagaacagagatgggagagtagcagtgtggttgatgatggtgttcttgctactgtccggatcatatcagtgtggtaggttcatagctaggttgtaatgtcagtgattagtttggtttttgatgtgcatttgattgtgtggttgttgttgttgttgatggagcagaggcgagagctctgatgaggcgaagcaggaggaacacgctgctgaacgcgctgtacaagctcaacttcatcaggacggtggagccgatgcagctgccttcttcgtctccttctccggcgaagccggacggcgacgcggcgagcctcgccgacgccaccggcgacggctcgagctcgccgtactgcgtcaaccctccgaacgcgcccccgtcgtcctccaccccgacaacgacaccgacgccgacacctcccttcgcctcgacgccgttcgccccggacgaccagcccccgccgctgccccccatcggcggcttcacgccaccgtcgttcgagccgagcccgcctgcgtcgtccacgcctggcttcaccccgagcacgcctgggtctgccccaccgagcccgatcttcgtcgtgcccagccctcccgagaccggacccggcggcggcggtttaggtggcggcagcggcggcgagggcggcggcggtgtaggtggcggcagtggagcgaggcggtgcggtggtggtgtaggtggtgggctggcggcggcggcagtggcggcgagggtggtggcggtggcggcagtagcggtggaggcgggagcaatggtggaggcgggagcagcggaggaggcgggaacagcggcggcgggggaggagggggagggttcttgccgccgatagtgtaccgccgccgcncgcgcgnnggcccgggggcgggggaggcgctgtggtgcggtgcgaagccgacggtgccggacccgataatgcaggaggcgatggactacgcgtgcgggtcgggggcggagtgcgggtcgatccagccgagcggggcgtgctacacgcccgacaccgtgctcgcccacgcctcctacgccttcaacagctactggcagatgaccaaggccgccggtggcacctgcgacttcggcggcaccgccaccatcgtcacccgtgacccaagtaaataataacaacaccatttttttattatttaccctctccttctccttctccttctccttcttctcggcccaaaatataacaatctaggattagaataagataaaacatattttactccatccaacactacgctgcatattttgggatgaagtgagtagtacgtgctgatgattatttttgcaaaaaaaataaaaaagatttttggggatttaccctctcttcctcatttttcttcttctcatcgcattccacgaaacatataggaatctagtataagatgaaatatattctaatactttatccgatactatgttgtatattttgggatgaaaggagtagtatgggctgatgaatctttttgcaaaacgaaaaaaaagagatttttggggactaataacatttattattaccatctccttctcaacgtattctttcttcacaacccaaaatattagggtatatttttttatgacgggaaattgatgtagttggatttgtgttatttaggaatgttatgtgttgatgatttttttttgcaaaaacaaaatgtttttttattaaatcttttgtatagtactttatagtgtttactgctttagttagtgcaatctgctagctagaacagagaagaaaaggacacttgccactgaacatattgcactgaatcaggtgctctgcattcagatgctctgtccactgtcctggctaaatttcagtttttgaaactacctacttgctgagtttttgttgcaactaagaagtcattttctctctcttatgctgtttttgatgaactctgcaggctatgaaaagtgccaattcgacctactatgaaggagttgcactgcagagatgcagcagaacaggctgcattgcatgtgcatgcagatcgatgtgcaaacattctttgcaagtttgttgggcagtcattccatttgcctctaggccacatagcactgcagattttgtaactagctgtttagcatgattttgatcattattacacgactaatacttgtgcaaaaaggtgattccttcacatgtggagtattatactagcactagtcactcctctctcgcctttttcctctttagctttttcaagctctctttgcccaattatttgagacataatatgctaacttgatattcacgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0612100, RefSeq:Os04g0612100