Os04g0612700

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Revision as of 11:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0612700| Description = Similar to Cinnamyl alcohol dehydrogenase (EC 1.1.1.195)| Version = NM_001060383.1 GI:115460495 GeneID:4336968| Leng...")
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Gene Name

Os04g0612700

Description

Similar to Cinnamyl alcohol dehydrogenase (EC 1.1.1.195)

Version

NM_001060383.1 GI:115460495 GeneID:4336968

Length

4099 bp

Definition

Oryza sativa Japonica Group Os04g0612700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31468161..31472259

Sequence Coding Region

31468200..31468327,31469849..31469962,31470524..31471064,31471659..31471812,31471914..31472116

Expression

GEO Profiles:Os04g0612700

Genome Context

<gbrowseImage1> name=NC_008397:31468161..31472259 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31468161..31472259 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgacgacgacggccacggcggcggcggagcaggcgccgccgccgcagcatacgaggaaggcggtggggctcgccgcgcacgacgactccggccacctcacacccatccgcatctcgcgcaggaaaactggagatgacgacgtcgctataaaggtgctgtactgtgggatttgtcactctgacctgcacaccatcaagaatgagtggagaaacgctgtctacccagttgttgcagggcacgagatcaccggggtggtgaccgaggtggggaagaacgtggcgaggttcaaggccggcgacgaggtcggcgtcgggtgcatggtgaacacctgcggcggctgcgagagctgccgggacggctgcgagaactactgctccggcggggtcgtcttcacctacaactccgtcgaccgggacggcacgcgcacctacggcggctactccgacgcggtggtcgtcagccagcgcttcgtcgtgcgcttcccctcctccgccggcggcggcgccggcgccgcgctgccgctggacagcggcgcgccgctgctgtgcgccggggtgacggtgtacgcgccgatgaggcagcatgggctgtgcgaggccgggaagcacgtcggcgtggtggggctcggcgggctcggccacgtcgccgtcaagttcgccagggcgttcgggatgagggtgacggtgatcagcacgtcgccggtgaagaggcaggaggccctggagaggctcggcgccgacggcttcatcgtcagcaccaacgccagtgagatgaaggctgcgatgggcaccatgcatggcatcatcaacacggcctctgcaagcacatccatgcactcttacctggcactcttgaagcccaagggcaagatgatcttggttggcctgcctgagaagcctctccagatcccaaccttcgctttggttggagggggcaagatactagctgggagctgcatggggagcatcagtgaaacgcaggagatgatcgacttcgccgccgagcacggggtggccgccgacatcgagctgatcggcgccgacgaggtgaacacggccatggagcgcctcgccaagggcgacgtcaggtaccgcttcgtcgtcgacatcggcaacaccctcaggtcggattga</cdnaseq>

Protein Sequence

<aaseq>MAPTTTATAAAEQAPPPQHTRKAVGLAAHDDSGHLTPIRISRRK TGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVVAGHEITGVVTEVGKNVARFKAGD EVGVGCMVNTCGGCESCRDGCENYCSGGVVFTYNSVDRDGTRTYGGYSDAVVVSQRFV VRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQHGLCEAGKHVGVVGLGGLGHVA VKFARAFGMRVTVISTSPVKRQEALERLGADGFIVSTNASEMKAAMGTMHGIINTASA STSMHSYLALLKPKGKMILVGLPEKPLQIPTFALVGGGKILAGSCMGSISETQEMIDF AAEHGVAADIELIGADEVNTAMERLAKGDVRYRFVVDIGNTLRSD</aaseq>

Gene Sequence

<dnaseqindica>40..167#1689..1802#2364..2904#3499..3652#3754..3956#acctagccagctagcaaccgacaagccaaggcgacggcaatggcgccgacgacgacggccacggcggcggcggagcaggcgccgccgccgcagcatacgaggaaggcggtggggctcgccgcgcacgacgactccggccacctcacacccatccgcatctcgcgcaggtatgaacagccaaccgtataccgctccatgctaagaggatctttgtcgtgctcgatgattgctcgatgattctcccgcgccatggcgccattgatgggagattgggagacatatggagcttttttttttctctccagagtttaagatgatctatcgtgtttgaatttgactgttactctcgtagcaacaatagtttacaggatgtccacatcgaattagtgaaaatcgccgtttggttcatggagttaatagaatctgaagctctcatgagccagcgtcacttgagctttcgatttttgttttccccttccatttccagtcatttccagccttctcatcggatttgtagattgtagttttgcatttgatttccctgcgagcaacggtgctcagcatttgcacatcgaatttcggtcatccatgtgcaaaggaagcaaaattcaccactttttgaaactgttcttttttaaaaatcttttagagaagtgtatttattacctggcctcgttcaaccggatatatgcagccatttaaattggttctgaaactgttcttgatcaaatggagtatctcaaccaagccctttcgtgccaaatcaacaaacaacagcaaaatctttccccagacgtctacagtacaaaaaccctgaccatccagcaccagccagcgctggctcactgacctgcagcaaccagctttaaaaaccatgcgcatttgcagcacgtattctgtaccaggaatacgggatccgtcagatctcaactgcaaggcaccctttcttcaattgtttttggtggtgagttaatactgttcaacagtgaccatactgggcatgcctcagctgcaagaatttatggtgctcgatcgctactacgtcatccatcttcttttcatgtgcgaccattctggctgtgattggctggctgctgctgtcaaagtaacaggagtgatttactttcacagtctggttgtatggtacataattcagttatccttctggaatctgaactcctcctggcttagtcatagcagtaaaaatgttcattcaagaaacaggctttcaagcagtaggcggcttgctgcacatggcttgtttttgttaccagtttttttgtcgagcctatgtgaattttcacaagtttacagccatctgtgtgatggtaaattgaggatcttgctgtatgccaattcacttgctagtgttgtaagcatgcatcttctttcagcttcagcagttcaaggctgttgatttgatggtactgaattagttccctgaaatacttcagataaagtaaaagggaaagcaaaataaaagaaaaatttcagttctaccagttcatggcttagttaaaatcttgggaggtgaagcatggtgtttaggctctctcttcttgtgtacttgagagtctgaactctcaatgctgaagtaataaccactgcagttctgctaaaaggttattggctcagtagagaaatagtatatgtttctgacttgtgttctatatattgccatttttcaggaaaactggagatgacgacgtcgctataaaggtgctgtactgtgggatttgtcactctgacctgcacaccatcaagaatgagtggagaaacgctgtctacccagttgttgcagggtacatccttcttattgcatcaccaatttatcaatcaatcgtttttcttttcttcttggttctgtgcgcatccagatggaaaggctggatgcaatttcattgcttagtgaaatatccattatcagttcatactttcttccggcaaagctgaattatcatactgtaaactgcaaatcttgtcagttttttttcacgataatgaaattcattttgtttttacttcaaagaagctacaaccaaccactaccgccgtttcaggttataagacgttttaactttagtcaaagtcaaactgcttcaagtttgactaagtttgtagaaaaaataataataacattttcaacccaagacaaatttattatgaaaatatattcagttattaatttaataaaactaatttggtattacaaatattactatatttgtttataaacttagtcagactttatcaaagtcaaaacatcctgtaacctaaaacggagggagtattactctaaagtgctttcaacttacttggaaaaaagaaatgcaaactttggctgcatggtttgattgatgcaggcacgagatcaccggggtggtgaccgaggtggggaagaacgtggcgaggttcaaggccggcgacgaggtcggcgtcgggtgcatggtgaacacctgcggcggctgcgagagctgccgggacggctgcgagaactactgctccggcggggtcgtcttcacctacaactccgtcgaccgggacggcacgcgcacctacggcggctactccgacgcggtggtcgtcagccagcgcttcgtcgtgcgcttcccctcctccgccggcggcggcgccggcgccgcgctgccgctggacagcggcgcgccgctgctgtgcgccggggtgacggtgtacgcgccgatgaggcagcatgggctgtgcgaggccgggaagcacgtcggcgtggtggggctcggcgggctcggccacgtcgccgtcaagttcgccagggcgttcgggatgagggtgacggtgatcagcacgtcgccggtgaagaggcaggaggccctggagaggctcggcgccgacggcttcatcgtcagcaccaacgccagtgagatgaaggtaattttaaagctagtttgatcaagtcaagagattattaaatgaactttaagaacggattacacgatagtaattacaatctacaactcctgtacaagtagtaaattaataggaccactttggactgagttaagaagagatcaatgaactattcagttctacattaatcgtgtagtcatatggaaggacatcctactgatgcagatgcagtaatatggcacatcacaaacatacaatttcaaatttgacttttacaagttgcgtttgatatgttatttttgttacaaattatagaagtcgaatttgaatttgcatgtttgtggagtgttatattagtagatgtcaatctattttttcaattttttttaatatttttataatcgtttaattaacatgcaataaacgggttaacatccactcaagtggttataatccatctccatcaatttattgatgtgctgcagtgcaactttgcaaggctatgcaagccgaagaaatctttgaatacaactgatgcacctcattgccgacagagcatcttaagattgtttggtcaagtatctgaatttgcattttggacttgtgtttttgcaggctgcgatgggcaccatgcatggcatcatcaacacggcctctgcaagcacatccatgcactcttacctggcactcttgaagcccaagggcaagatgatcttggttggcctgcctgagaagcctctccagatcccaaccttcgctttggttggaggtaatttactagtttgtctgacgctgcatcgtctgattccttctcaaattcatggcaaaatttgacagtttgttttgtgacaaatctttgcaaatcaacagggggcaagatactagctgggagctgcatggggagcatcagtgaaacgcaggagatgatcgacttcgccgccgagcacggggtggccgccgacatcgagctgatcggcgccgacgaggtgaacacggccatggagcgcctcgccaagggcgacgtcaggtaccgcttcgtcgtcgacatcggcaacaccctcaggtcggattgactagggagctcactgtcactggtctcagctctgtagcataccggacctgcaatcctgcaaagtagtgcaatcttcttgctacaagacatacatatcacctctacttggtgtcaataaatgtagcaaaagtggtacattgttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0612700, RefSeq:Os04g0612700