Os04g0613200
| Gene Name |
Os04g0613200 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001060387.1 GI:115460503 GeneID:4336972 |
| Length |
3342 bp |
| Definition |
Oryza sativa Japonica Group Os04g0613200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:31487802..31491143 |
| Sequence Coding Region |
31487805..31488050,31489132..31489374,31490004..31491017 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:31487802..31491143 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:31487802..31491143 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaagaacatggaggctgcaagaagaggaagaagaggaaggcaaggtggtggtttgctgctggtggttcttgccgctcttctgcttcttctccttgcattggcgcgcggcgcgagcgcgtgggcccacggcgggctcgccggcggcgccggcgccggcgccggcgagcggcggtacatggatctcgcgatgaggaggatggagagcgtcagatcttccttcgtcgcgaggagggaattagcaacgtctacggcggcgagctcgtcgcgggtgtaccacgtgacggactacggcgccgacccgaccggcggcgccgacgcgacggcggcgatcaacagcgccatcgccgacgcgttccgccgcccctccaacgccaccatgaccggcggcatccccgacctcggcggcgccgagatccacctcgacggcggctcctacctcctcaagggccccctctccctccccgcctccggcggcggtaacttgaagattcacagcgggtcgctgcgggcggcggacgacttcccgacggaccggtatttgatcgagctgtcggcgaaggcggccggcggtggcggggggagctcgccggcgatgagctactactacgagtacgtgacgctgcgcgacctgatgctggactgcaactaccgcggcggcggcgtgcgggtggtggactcgctccgcgtcggcgtcgacaactgctacgtcgtccacttcgcgacggacggcgtcgcggtgagcggcggccacgagacgttcgtccggaacaccttcctcggccagcacatgaccgccggcggcgaccccggcgagaggtcgttcacgggcaccgggatccgcctcgacggcaacgacaactccgtctccgacgtggtggtgttctcggcggcgaccgggatcatggtcaccggaggcgccaacgccatctccggcgtgcactgctacaacaaggcgaccgggttcggcggcgcgggcatctacctcaaggtgcccgggctgacgcagacgtggatcaccaactgctacatggactacaccggcatcgtcgccgaggaccccgtgctgctccacgtctcgggctccttcttcctcggcgacgccaacgtcgtgctcaaggccgtcaatggcgtggcgaggggggtgcagatcgtcggcaacctgttcaacgggagggggaagggggtggacatcgtggagctcgacggcgagttcgcgacggtggagcaggtgtacgtggcgcagaacgcggcgacggggatgacggtgaggtcgacgacggcgcgcgccgcggcggaggggaacgggagctcgtggacggtggacttctcgccggtgctgctgttcccggaccggatcgggcacgtgcagtactcgctcgccgccggcgacgcgttcccgggccacgctctccggaacgtctccggcaaccgcgtcgtcatcgccaccgacgccgccgtgtccgccaccgtgcacgtgctcgtcgaccagaacagcagctga</cdnaseq> |
| Protein Sequence |
<aaseq>MKNMEAARRGRRGRQGGGLLLVVLAALLLLLLALARGASAWAHG GLAGGAGAGAGERRYMDLAMRRMESVRSSFVARRELATSTAASSSRVYHVTDYGADPT GGADATAAINSAIADAFRRPSNATMTGGIPDLGGAEIHLDGGSYLLKGPLSLPASGGG NLKIHSGSLRAADDFPTDRYLIELSAKAAGGGGGSSPAMSYYYEYVTLRDLMLDCNYR GGGVRVVDSLRVGVDNCYVVHFATDGVAVSGGHETFVRNTFLGQHMTAGGDPGERSFT GTGIRLDGNDNSVSDVVVFSAATGIMVTGGANAISGVHCYNKATGFGGAGIYLKVPGL TQTWITNCYMDYTGIVAEDPVLLHVSGSFFLGDANVVLKAVNGVARGVQIVGNLFNGR GKGVDIVELDGEFATVEQVYVAQNAATGMTVRSTTARAAAEGNGSSWTVDFSPVLLFP DRIGHVQYSLAAGDAFPGHALRNVSGNRVVIATDAAVSATVHVLVDQNSS</aaseq> |
| Gene Sequence |
<dnaseqindica>4..249#1331..1573#2203..3216#ttgatgaagaacatggaggctgcaagaagaggaagaagaggaaggcaaggtggtggtttgctgctggtggttcttgccgctcttctgcttcttctccttgcattggcgcgcggcgcgagcgcgtgggcccacggcgggctcgccggcggcgccggcgccggcgccggcgagcggcggtacatggatctcgcgatgaggaggatggagagcgtcagatcttccttcgtcgcgaggagggaattagcaacggtcagtgtagtttaactaactctactccatttcatggcttcctgctgcttctgcttccattactgtgttgattgcgtcatttcaacttgttaattgcaagcctctctgctgcttccaggcttgcagctctctgctgcaaaaaaaaaagttttttaatgagtagtttgatcattttgttggggagcgtttgttgtgctgggtacatgttgcaattaattaactgcattacactgggccaaagttagcagtaaaaccatcattttcgaagaacagcaatgcatatgcacacaaagagaagttatcagataattgtgtcggtttgcttttgcactggcagtacattctttttttttttcatttgccttttgcaataaaatgagcagttttattaccccaaaaagcagcttttttcctaagcatatctccgtcatttgtcggccggaagtctctgtccacgctctcaatgaaatctagccgtcctcaaagaaatgtctttcattcataaatccgcattcacatgcccaacgcattagctcatgcatcagtaaaaaaaaaaactgcatttgcagttcatattttccaacttttggtatgcacaaacgcattacctcaacgttttttctttttacacttttggtattcccatgcacaactctttcaagagttcaagggcgtcatattttgactgcatttgtcatcaactttggaaaaagaaaaaagaagatctcccattttctcacaatttcgtcaagaacgttaggtatactaccaatctagcaatgtaccatgaaatgcttacacggcagcgaagaaattgagaagttttctcctcagaaaatcctgctcactttccaccgtgttcggtagcaggtagcactagtagcaactgcccccacataaatgtaaaaaaaaggaagtaaaaattaaaatcaaaagcttcgcggctactcgtgccaaccaaactttgaactttttaccggtgctaactttgaactttctgagttttttttttaaaaaaaactttgaactttctaccggtgctgtgctgtcacgtctgacatggcgagttcgtgcattgcagtctacggcggcgagctcgtcgcgggtgtaccacgtgacggactacggcgccgacccgaccggcggcgccgacgcgacggcggcgatcaacagcgccatcgccgacgcgttccgccgcccctccaacgccaccatgaccggcggcatccccgacctcggcggcgccgagatccacctcgacggcggctcctacctcctcaagggccccctctccctccccgcctccggcggcggtaacttgaaggttagtaatgatgtcacgtgagtatttttatttattacttcatccgtcctataatataaaaaattttagagggtcataagatacatgtttcatgtttagatttatatgtttagatttatagtataatgatatgtcacataccttattcagagataccttattcagagggagtatatatcttttcctaactcattagttgtatacatattaacagaaactagatatatgaatcatttttactatgttaaaaaaattgcactatcttcgtcccaaatgttagtacaacataaaatgaaaaatgaaatttgacaaatcatttttaagaaattctttcagtcccaaaataagcacagtaatgagtttccgtgcccaactttaattgtccgtcttatttatttttttttgaaaaaactaaaaacataagtcacatataaagtaatctaatatcaataaaaatattaatcgtaaaaattttcaaataagatgaatgattaaagttgtacgcggaaatttatgattatgtttattttgggacagatggagtaatgaatttggacaaactaatactttgggatgtagaaggtattttgacatatgggtcccactgagggtgtatgtacacgtggcagattcacagcgggtcgctgcgggcggcggacgacttcccgacggaccggtatttgatcgagctgtcggcgaaggcggccggcggtggcggggggagctcgccggcgatgagctactactacgagtacgtgacgctgcgcgacctgatgctggactgcaactaccgcggcggcggcgtgcgggtggtggactcgctccgcgtcggcgtcgacaactgctacgtcgtccacttcgcgacggacggcgtcgcggtgagcggcggccacgagacgttcgtccggaacaccttcctcggccagcacatgaccgccggcggcgaccccggcgagaggtcgttcacgggcaccgggatccgcctcgacggcaacgacaactccgtctccgacgtggtggtgttctcggcggcgaccgggatcatggtcaccggaggcgccaacgccatctccggcgtgcactgctacaacaaggcgaccgggttcggcggcgcgggcatctacctcaaggtgcccgggctgacgcagacgtggatcaccaactgctacatggactacaccggcatcgtcgccgaggaccccgtgctgctccacgtctcgggctccttcttcctcggcgacgccaacgtcgtgctcaaggccgtcaatggcgtggcgaggggggtgcagatcgtcggcaacctgttcaacgggagggggaagggggtggacatcgtggagctcgacggcgagttcgcgacggtggagcaggtgtacgtggcgcagaacgcggcgacggggatgacggtgaggtcgacgacggcgcgcgccgcggcggaggggaacgggagctcgtggacggtggacttctcgccggtgctgctgttcccggaccggatcgggcacgtgcagtactcgctcgccgccggcgacgcgttcccgggccacgctctccggaacgtctccggcaaccgcgtcgtcatcgccaccgacgccgccgtgtccgccaccgtgcacgtgctcgtcgaccagaacagcagctgaagaacaaaaaatcaaaatgctgctgctgcctgccgcgattgcgcgcgagcaaggcgttagattcgtttgttcttgcgattcaccggcaaaattcgtctatatcagagagatggcaaaattggcaat</dnaseqindica> |
| External Link(s) |
