Os04g0613700

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Revision as of 11:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0613700| Description = The start codon is not identified.| Version = NM_001060392.1 GI:115460513 GeneID:4336977| Length = 4500 bp| Definit...")
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Gene Name

Os04g0613700

Description

The start codon is not identified.

Version

NM_001060392.1 GI:115460513 GeneID:4336977

Length

4500 bp

Definition

Oryza sativa Japonica Group Os04g0613700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31507473..31511972

Sequence Coding Region

31507846..31507943,31508050..31508206,31508313..31508427,31508634..31508701,31508789..31508932
,31509011..31509088,31509173..31509255,31509347..31509386,31509611..31509685
,31509820..31509932,31510020..31510103,31510457..31510496,31510595..31510746
,31510969..31511023,31511635..31511970

Expression

GEO Profiles:Os04g0613700

Genome Context

<gbrowseImage1> name=NC_008397:31507473..31511972 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31507473..31511972 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cggcgatccaagaacaatccatccatccgattcgccgttcgtccgagttggcattcctccatctcttctcctcttcttgcgcagcgcgccattgctgcagtcacagatctctctctagtcccaccattttctttcttgggtgaggagaagggagggggagggatgaaggagatagtggttgggtcggtggcggcggcggcggcggtggggaggtggggagcggcgccgccgcaggcgatgctggagaggatgaaggattacgggcaggagggcgcgttcgcgctctgggacgagctctcgcccgaggaccgggagctgctcgtcagggacatcgagagcctggatctttcaaggattgatcggatcatccggcgctcccttggatcacaaggattcactttgcccaccgtcgagccggtgccggagtccagcgtgtccaaggtggaggagaggttgccggaggacaaagaacggtggtggaagaaggggctgaaggccatttcggaggggaagctagccgtcgtccttttagccggtggtcaggggactcggcttggtagctctgatcctaaaggatgtttcagtatcggacttccgtctggaaagtcgcttttccaactccaagctgaacggattttgtgtgttcaaaagcttgctgctcaatcaagtccaaataacaccgtacctattcattggtatataatgaccagccccttcaccgatgacatcactcgcaaattcttcgaaagccgtaaatactttggcttagaggcagaccaagtgacatttttccaacaaggcacccttccatgtgtttctgctgatggcagatttattatggagacaccatacaaggtagcaaaggctcctgatggcaatggtggagtttatgctgccctcaagtccagaaggttgctggaagatatgtcttcacggggtgtaaagtatgtagattgctacggggttgacaatgcactggtccgcgttgctgatccgacgttcctaggttacttcatagacaaagctgtatcttctgctgcaaaggttgttaggaaggcttacccacaagagaatgttggagtatttgttcgacgaggacgtggtggacctctctctgtagttgagtatagtgaaatggacgcagctatggctactgaaattaatcagtcaacgggacgccttcgttattgttggagcaatatttgcttgcatatgttcactttggattttttgaatcaagtagcaaacagccttgagaaggacagtacttatcatcttgctgagaagaagatcccttccatccatgggtacgcaatgggcttgaagcttgaacagtatatattcgacgcgttcagttactccccatccacagcactttttgaggttttgcgggaggaggaatttgcgcctgtaaagaatgcgaatggcgcgtcttatgatacccctgatagcgcaaagctgatgctgcttcgtctccatagtagatgggtagttgctgctggtggcttcttgacccattctgtcccattgtacatgacaggtgtggaagtttctccacttagctcctatgctggagaaaacttggaagccatttgccgcggacggacattccatgcgccgagtgagatttccttctag</cdnaseq>

Protein Sequence

<aaseq>RRSKNNPSIRFAVRPSWHSSISSPLLAQRAIAAVTDLSLVPPFS FLGEEKGGGGMKEIVVGSVAAAAAVGRWGAAPPQAMLERMKDYGQEGAFALWDELSPE DRELLVRDIESLDLSRIDRIIRRSLGSQGFTLPTVEPVPESSVSKVEERLPEDKERWW KKGLKAISEGKLAVVLLAGGQGTRLGSSDPKGCFSIGLPSGKSLFQLQAERILCVQKL AAQSSPNNTVPIHWYIMTSPFTDDITRKFFESRKYFGLEADQVTFFQQGTLPCVSADG RFIMETPYKVAKAPDGNGGVYAALKSRRLLEDMSSRGVKYVDCYGVDNALVRVADPTF LGYFIDKAVSSAAKVVRKAYPQENVGVFVRRGRGGPLSVVEYSEMDAAMATEINQSTG RLRYCWSNICLHMFTLDFLNQVANSLEKDSTYHLAEKKIPSIHGYAMGLKLEQYIFDA FSYSPSTALFEVLREEEFAPVKNANGASYDTPDSAKLMLLRLHSRWVVAAGGFLTHSV PLYMTGVEVSPLSSYAGENLEAICRGRTFHAPSEISF</aaseq>

Gene Sequence

<dnaseqindica>4030..4127#3767..3923#3546..3660#3272..3339#3041..3184#2885..2962#2718..2800#2587..2626#2288..2362#2041..2153#1870..1953#1477..1516#1227..1378#950..1004#3..338#ggcggcgatccaagaacaatccatccatccgattcgccgttcgtccgagttggcattcctccatctcttctcctcttcttgcgcagcgcgccattgctgcagtcacagatctctctctagtcccaccattttctttcttgggtgaggagaagggagggggagggatgaaggagatagtggttgggtcggtggcggcggcggcggcggtggggaggtggggagcggcgccgccgcaggcgatgctggagaggatgaaggattacgggcaggagggcgcgttcgcgctctgggacgagctctcgcccgaggaccgggagctgctcgtcagggacatcgaggtgagcgagcgagtgagtgagctcaatgcggctgcgagggttgggagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagattcggttttgcgccgtgaatttcgcgtcgaagtgtttgattactttcgattggagattgtgttttctgtcgggagctctctgtccgtttctgtttgtcagggacgaactctgcataagaagtttgattttttttccccttttttggccggaattctgcctgtaagctctggtctttgaatgtggttttttggtctaagtgtgaattctgcaggagttgatttatcagttgaaattttttactgcggtttgtggggaaaaggagtttggattttgagtgataatttacttcacgctttcacagctttgttgccagtgtgaccaattatttatctgctctccataggtcttaatctgcattgcttacactgtacaatagctcaagagaaacctgcagcatgattttattgtcatttgagcttaccatttcgacagtgaccaatggagctacatatactgcatttttttttcagagcctggatctttcaaggattgatcggatcatccggcgctcccttggatcacaaggtgagaggtctctcagttgaagggaaagaacaattatctttccaatgtagaacattagttaattgtatttttttatcatcgcacttgccttagtttatttatagataatggaagcttttgatgaactcagtcaattacatcaagatgatagaactgtaccgagaacactttatcagtaattgccttagttttatggtgtgattatgctctttctaagtgcaggattcactttgcccaccgtcgagccggtgccggagtccagcgtgtccaaggtggaggagaggttgccggaggacaaagaacggtggtggaagaaggggctgaaggccatttcggaggggaagctagccgtcgtccttttagccggtggtcaggtgctctgatggaaagattacctgaatttgcaatttctatagtttgtgcattgagaagcagcctccttatggtttaatttcttttcatgtatgtgcaggggactcggcttggtagctctgatcctaaaggatgtttcagtaagttgattccacttcaatctttgtatattagtacttgagtttgtacgcacaaatgtatggatatttgttgagccaaaaaaagaagtgaggtgctctgaattatttctgttttacacaatcttttttgttcatagctctcagattgtttattttagagtgtaataataatgataaatgtagtctacatcaccttaatgccatttaatcaaaggaaatgacatattctagtttatctctatccatccatattagtgtggaattgctcagttgctcttttcgataattcttggtccaactctgtctatgtatatatcatggcttatttttaacctcttatttctgccctttaggtatcggacttccgtctggaaagtcgcttttccaactccaagctgaacggattttgtgtgttcaaaagcttgctgctcaatcaagtgatagtaatgtcttttaaccacaattttactctcttttttaatttcgtttcacatctttaccctgaaatttgaaataacttgcaggtccaaataacaccgtacctattcattggtatataatgaccagccccttcaccgatgacatcactcgcaaattcttcgaaagccgtaaatactttggcttagaggcagaccaagtaagatcaagtacttttttttttcatttgtgttaactattccaatggaatttcaacaaaagatccaacaggatcccccattcactagtaatgtttaataggtaggtttgaacagctgaacattttcttggcaggtgacatttttccaacaaggcacccttccatgtgtttctgctgatggcagatttattatggagacaccatacaaggtaccatcttctattatttttctaatcttccactgattgatcttgtattactaggaggtgatactgcggtttgtaacaacttgattttcgagtttgacacatggtctgagatctcacaattcaagtgcaattgtgatacctacaaatattgttttgatgctgcctatttaaaatgttaaatgatggcattctttttttttttcacatgctctgttcgaaaccaggtagcaaaggctcctgatggcaatggtggagtttatgctggtaatctcccaaaaagatgtattgtatttctagttgtagtgttgcatggtcatttctgatgcctggttttcactactgcaacatcctacagccctcaagtccagaaggttgctggaagatatgtcttcacggggtgtaaagtatgtagattgctacggggttgacaatgcactggtgaggacattaacttccccataggataatccatataaccttctgcgttttctcctcattcgcttatcaatattatgtatgcaggtccgcgttgctgatccgacgttcctaggttacttcatagacaaagctgtatcttctgctgcaaaggttgttaggaaggtacagtcaaatacttctcatgcttcatatcattaatccaatatgcaccatgttgatagtaaataatatgctgaacaggcttacccacaagagaatgttggagtatttgttcgacgaggacgtggtggacctctctctgtagttgagtatagtgaaatggacgcagctatggctactgaaattaatcagtcaacgggacgccttcgttattgttggagcaatgtatgttctatcctttgtttctcaatccctcctggttgcactttctcttgaggtgtataacaaccgcatgttcttatctcactgcagatttgcttgcatatgttcactttggattttttgaatcaagtagcaaacagccttgagaaggacagtacgtgagtgcttctataactgttttaagtctgaagcagtaggaattcattgtgtttactttctttgcaaattacagtagttatctattttctcgttatgcccctcttactcttcctaagaaagtgagagccatgtttaaaactgcaagctccatcattcattctattgtatttgtagcacatgaaatttacaaaacttttgtgtccagttatcatcttgctgagaagaagatcccttccatccatgggtacgcaatgggcttgaagcttgaacagtatatattcgacgcgttcagttactccccatccacagcactttttgaggttcaacttctcagtcgcctatgctcttataacattctagatgtcatgctgtgtctttttgttatgattttgagaaactcatcggtatacatatctgaaaattcaggttttgcgggaggaggaatttgcgcctgtaaagaatgcgaatggcgcgtcttatgatacccctgatagcgcaaagctgatgctgcttcgtctccatagtagatgggtagttgctgctggtggcttcttgacccattctgtcccattgtacatgacaggtaaattttctcctgtccaatacattcagaaacttgccaagaacaaaaaacaaggaaaaatgatattttcttttactaatattgtcatgattgattttgcttgtaggtgtggaagtttctccacttagctcctatgctggagaaaacttggaagccatttgccgcggacggacattccatgcgccgagtgagatttccttctaggtgacctgtgacacaaacagctctgtaacttcaaatttgtggaacagtggcagagaaaggattgcaggatttcatctcaaacagaaaaaaaaaaaagatcacagggtttccattttccctatgtcatgggatgaatggatgctgtacagttcagtgagctcctcagatattggccgggttgttttatgttgtgtcatctgtgagtattgtaatgtagcccccaaaattctaaggccatcttgattttcacacaaaaacatttgtgtggcagtgccattttggtttctcctgtagtcctgtgttgctcccatgtaatctgtagatgttttttcccccttcaaaacaatatagatctttgaatgcccatgatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0613700, RefSeq:Os04g0613700