Os04g0613900

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Revision as of 11:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0613900| Description = K+ potassium transporter family protein| Version = NM_001060394.1 GI:115460517 GeneID:4336979| Length = 5102 bp| De...")
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Gene Name

Os04g0613900

Description

K+ potassium transporter family protein

Version

NM_001060394.1 GI:115460517 GeneID:4336979

Length

5102 bp

Definition

Oryza sativa Japonica Group Os04g0613900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31526849..31531950

Sequence Coding Region

31527058..31528106,31528528..31528782,31529004..31529118,31529198..31529250,31529339..31529599
,31529861..31529911,31530013..31530258,31530433..31530658,31530964..31531083

Expression

GEO Profiles:Os04g0613900

Genome Context

<gbrowseImage1> name=NC_008397:31526849..31531950 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31526849..31531950 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgctgtcagagagcgaggggacaaatagggggagcatgtgggagctggatcagaaccttgatcagcccatggatgaggaggcaagcaggctgaagaatatgtacagagaaaagaagttttcgtcgcttttgctactgcggcttgcatttcagagcctgggggtggtctttggtgacttgggtacatcaccattgtatgtgttctataatgcctttcctcatggagtagacgatgaagaggatgttattggtgctctttccttgatcatttacacccttaccctcattcctcttctgaagtatgtttttgttgtcttgcgggcaaatgacaatggtcaaggtggcacatttgctctttattccctgctatgccgtcatgcaaagattagcactatacccaaccaacacaagactgatgaggacctgacgacatatagtcggcaaacatacgaggagaattcagtaggagcaaaaattaaaagatggctagaagcgcatgcatataaaagaaattgtcttcttattgttgttctcattggtacttgtacagctattggagatggaatccttacccctgctatatcagttctttctgcatcaggtggaataaaagttcaaaatccgaatatgagtactgatgttgttgtaattgtttccgtgatcatcttaattggattatttagcatgcaacactatggtacagacaaagttggatggctctttgcacctatagtgctcctctggttcattctaattggaagtgtcggagcactgaacatacacaaatataaaggctctgtgctaaaagcatacaatccagtctatatataccggtatttccagcgacgaaattctgatagctgggcctctcttggaggaatcatgctaagcatcacaggaactgaagcactatttgctgatctatgccattttcctgtatttgccattcagattgcattcaccttgattgtattcccatgccttctactggcatacacagggcaggctgcttatatcattgcccacaaggaccatgttgctgatgctttttatcgctccattccagattccatatactggccagcatttgtcatagcaactgcagcagcaatagttgcaagccaggccaccatatctgcgacttactcgataataaagcaagctcttgcactaggctgctttccccgtgtaaagatagtgcacacctcgaagaaattccttgggcagatctacatccctgacatcaattgggtccttctaattctttgcattgctgtgactgctggattcaagaaccaaagtcagataggaaatgcatatggaactgcggtggttatagttatgctagtcacaacatttctgatggtaccaataatgttgctggtgtggaagagtcactggattctagttgtcacctttattgtgctttcgttgatggtggaaatcccctacttctcggcctgcttattgaagattgatcaaggtggttgggtcccacttgtcattgccacagccttcttcatcatcatgtatgtgtggcatttttgcacagtgaagcggtatgaatttgagatgcacagcaaggtctcaatggcctggatccttggcctcggtccgagcctcggtctggtcagggttccaggtataggctttgtgtacactgaactggcaagcggtgtcccgcacatcttctcccacttcatcaccaacctccctgcaatccactcggttgtcgtcttcgtctgtgtgaagtaccttccagtgtacaccgtcccgatggatgagcggttcctcgtgaggaggatcgggccaaagaacttccacattttccgctgtgttgcgaggtacgggtacaaagacctccacaagaaagatgaggactttgagaagatgctcttcaactgcctcttgtccttcctgcgactcgagagcatgatggagggctattccgattctgatgacttcagtgtgccggagcagaggacggagggatccatcagcaatgcatttctggctgagaaaaccaacaacaacacaatgtgctcccatggtgacctgagctactcatcacaggactccattgtgccagtgcagtcacctctgagggggaacagcctactgaggtattcaagccaggccagccacactgtcagtgatgaactggagttcctgaaccggtgtaaggatgccggtgtcgtccacatcctcgggaacaccatcgtcctcgcgaggagggattcggggatcatcaagaagatcgcggtaaattacatgtatgccttcatgaggaagatctgcagggagaacagtgtgatcttcaatgttccccatgagagcttgcttaatgttggccaaatatattatatatga</cdnaseq>

Protein Sequence

<aaseq>MASLSESEGTNRGSMWELDQNLDQPMDEEASRLKNMYREKKFSS LLLLRLAFQSLGVVFGDLGTSPLYVFYNAFPHGVDDEEDVIGALSLIIYTLTLIPLLK YVFVVLRANDNGQGGTFALYSLLCRHAKISTIPNQHKTDEDLTTYSRQTYEENSVGAK IKRWLEAHAYKRNCLLIVVLIGTCTAIGDGILTPAISVLSASGGIKVQNPNMSTDVVV IVSVIILIGLFSMQHYGTDKVGWLFAPIVLLWFILIGSVGALNIHKYKGSVLKAYNPV YIYRYFQRRNSDSWASLGGIMLSITGTEALFADLCHFPVFAIQIAFTLIVFPCLLLAY TGQAAYIIAHKDHVADAFYRSIPDSIYWPAFVIATAAAIVASQATISATYSIIKQALA LGCFPRVKIVHTSKKFLGQIYIPDINWVLLILCIAVTAGFKNQSQIGNAYGTAVVIVM LVTTFLMVPIMLLVWKSHWILVVTFIVLSLMVEIPYFSACLLKIDQGGWVPLVIATAF FIIMYVWHFCTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGFVYTELASGVPHIF SHFITNLPAIHSVVVFVCVKYLPVYTVPMDERFLVRRIGPKNFHIFRCVARYGYKDLH KKDEDFEKMLFNCLLSFLRLESMMEGYSDSDDFSVPEQRTEGSISNAFLAEKTNNNTM CSHGDLSYSSQDSIVPVQSPLRGNSLLRYSSQASHTVSDELEFLNRCKDAGVVHILGN TIVLARRDSGIIKKIAVNYMYAFMRKICRENSVIFNVPHESLLNVGQIYYI</aaseq>

Gene Sequence

<dnaseqindica>3845..4893#3169..3423#2833..2947#2701..2753#2352..2612#2040..2090#1693..1938#1293..1518#868..987#agccagcagccagcagccagcaaagaaagaagccaagaagcgccaaaggaggaagaagactcctctctcttctcctcccttggctgcaattgcaatactgcaatacagcaaatccatatccagagaagcggttgaattccaggagccgtgtttgcgcagagaacgcatgctgcttctggaatcgtttcctgcctacttttcttctcctcccgtttggctgggcgccgctgctctctccgcctcagctcctcctcctcctcctcgtcgctctcttccctgtcgcggctgttgcgttttgccagttagagcccgactgcgtcggagccgtggcggggattgttgttgccggtgccaaaaatctgatcttggcgaaggttttggggtggaaagattgggttttctttggctgggattttcatggttataggaacctgtggcagacaggatttggagttctgagtttgaagtacttttgatgtgattcttggcgcttcggagatccatttttgtgggtttgttgcgaggctctgaagtttttcgctatcaaaggtgtggaagcagtttatttttccagtacagaaggactgttagtactgtggagatttcgttgggagctcaagtgtttgtctgattagctaaagctccaatcgttttgttgattgaagaattgaaggtggaggtgttcttgtggacactgagtccgaattttgtgtgtgagatcacctgaatttgttggaggccgaatgcttattgctaggataaatctacattttggtttctgcaaagactgaagtggacttgcttgctggggagtgtgcttggtacgaggatttgaggaggagctgtagctgaggtgaaaagagatcgatggcgtcgctgtcagagagcgaggggacaaatagggggagcatgtgggagctggatcagaaccttgatcagcccatggatgaggaggcaagcaggctgaagaatatgtacagagaaaaggtctgagatttctttctcttcagttattagcgtatgaaagtcgatttgttttgcacaaatgagggctttcagaatagctgaagtagatgtaaagatcggtctctgcatgtgactaattcatttcattggcagattcactactaacttttttagataatgaatttgctgcttagatggatggtactgcacgaatatttagtttgccatttgtagggcatgaaaaaactggatgtttatactgttctaattgaagtaactgagctggtaaatcagtaatttgtattgactgtttttccttaatacagaagttttcgtcgcttttgctactgcggcttgcatttcagagcctgggggtggtctttggtgacttgggtacatcaccattgtatgtgttctataatgcctttcctcatggagtagacgatgaagaggatgttattggtgctctttccttgatcatttacacccttaccctcattcctcttctgaagtatgtttttgttgtcttgcgggcaaatgacaatggtcaaggttagataattgatcttcctacaatctaagtagcatataacattgtagcctgaaaccatttgactgttctcgatattacaaacaaatgttgcttgcgcaattctgcttattattcacttgataacttgttacatattttcagagaagaccacttacagattgttatcctcacaggtggcacatttgctctttattccctgctatgccgtcatgcaaagattagcactatacccaaccaacacaagactgatgaggacctgacgacatatagtcggcaaacatacgaggagaattcagtaggagcaaaaattaaaagatggctagaagcgcatgcatataaaagaaattgtcttcttattgttgttctcattggtacttgtacagctattggagatggaatccttacccctgctatatcaggtacacatcttaatttctttttaatcaatactcagcatcatattcttctgagaaaatccaatgcatcttgaatctgatttatgatcttttttgtgttccagttctttctgcatcaggtggaataaaagttcaaaatccgaatatgagtactggtaatgctgtgtgccctttatagtctatcaaattcttggatattgtaaattctgtatatactgagtaaaatcatgttcttccttgatggaagtaagtcagtgacatttatatctgtttctatgcattattattgtcccaaatgcatgatccttcacgatcttaacaaggattccaaaatcccaatctaataatcattattttcttttgcattgattgatgttgcaaacttgtttgatctttggtctaccctgtattggcagatgttgttgtaattgtttccgtgatcatcttaattggattatttagcatgcaacactatggtacagacaaagttggatggctctttgcacctatagtgctcctctggttcattctaattggaagtgtcggagcactgaacatacacaaatataaaggctctgtgctaaaagcatacaatccagtctatatataccggtatttccagcgacgaaattctgatagctgggcctctcttggaggaatcatgctaagcatcacaggtgaggccctttcttcagtaatagagtttacctgcatcagcttatgtaaaacccattgtaacatgcaatacaatgttgtcctcttaaggaactgaagcactatttgctgatctatgccattttcctgtatttgccattcaggtaacatattttaagcaaggcattaccggatctttatgcaattgcgggttaactaaagtaaacatgtctattttttcagattgcattcaccttgattgtattcccatgccttctactggcatacacagggcaggctgcttatatcattgcccacaaggaccatgttgctgatgctttttatcgctccattccaggttctctcatctcaacagcttttcatctacctttttgtggaatagttcatccatgctttccacttgtctaagttgtcttgtgacagaatgtgaatgtgccaccacatcatgtctgctaggtgcacattggcatagtgcacaacccaatattgatagcttgtattgcttatggccctatttgtaatatggtgctcactgtgagatgtgtttaatgattgcagattccatatactggccagcatttgtcatagcaactgcagcagcaatagttgcaagccaggccaccatatctgcgacttactcgataataaagcaagctcttgcactaggctgctttccccgtgtaaagatagtgcacacctcgaagaaattccttgggcagatctacatccctgacatcaattgggtccttctaattctttgcattgctgtgactgctggattcaagaaccaaagtcagataggaaatgcatatggtaacatttcaccttttatataatatttttgaataatttggcatgccatggagctgccattttagcatcccaatgcaacatttatatgcaaaaacattttaatacactttgtgctaatcagtagtactttcataaaaccatttatatttcattttgactctggccatgattggtggttacctgacattcacatacaaatccctgatgatgtagtacaaaaactataaattccaaatttccatcattgtagatatcgtgccaaatttggataaataaatagaccatttaaaccaatacgactgcttctagtgacaccaatttttttttcctgaaaatgagaggctgatactgatttttcatgatataatatgcattgcatcattagtcaactcttgatttccattttatgatgtatgaacaggaactgcggtggttatagttatgctagtcacaacatttctgatggtaccaataatgttgctggtgtggaagagtcactggattctagttgtcacctttattgtgctttcgttgatggtggaaatcccctacttctcggcctgcttattgaagattgatcaaggtggttgggtcccacttgtcattgccacagccttcttcatcatcatgtatgtgtggcatttttgcacagtgaagcggtatgaatttgagatgcacagcaaggtctcaatggcctggatccttggcctcggtccgagcctcggtctggtcagggttccaggtataggctttgtgtacactgaactggcaagcggtgtcccgcacatcttctcccacttcatcaccaacctccctgcaatccactcggttgtcgtcttcgtctgtgtgaagtaccttccagtgtacaccgtcccgatggatgagcggttcctcgtgaggaggatcgggccaaagaacttccacattttccgctgtgttgcgaggtacgggtacaaagacctccacaagaaagatgaggactttgagaagatgctcttcaactgcctcttgtccttcctgcgactcgagagcatgatggagggctattccgattctgatgacttcagtgtgccggagcagaggacggagggatccatcagcaatgcatttctggctgagaaaaccaacaacaacacaatgtgctcccatggtgacctgagctactcatcacaggactccattgtgccagtgcagtcacctctgagggggaacagcctactgaggtattcaagccaggccagccacactgtcagtgatgaactggagttcctgaaccggtgtaaggatgccggtgtcgtccacatcctcgggaacaccatcgtcctcgcgaggagggattcggggatcatcaagaagatcgcggtaaattacatgtatgccttcatgaggaagatctgcagggagaacagtgtgatcttcaatgttccccatgagagcttgcttaatgttggccaaatatattatatatgaaacgcattttccggcttaatttgtgtaggagtagggctccatggaagagggagggaggcagctgtacatgttttttagggagaagcaactgtaaattattaataaacagtcatttttcatggggggtgtaattagtgagttgtaaatgcatatgacaaatgaatggatcagatcgaagcatgagagagatctgaaggctactattttct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0613900, RefSeq:Os04g0613900