Os04g0615900

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Revision as of 11:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0615900| Description = FAR1 domain containing protein| Version = NM_001060408.1 GI:115460545 GeneID:4336993| Length = 2603 bp| Definition ...")
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Gene Name

Os04g0615900

Description

FAR1 domain containing protein

Version

NM_001060408.1 GI:115460545 GeneID:4336993

Length

2603 bp

Definition

Oryza sativa Japonica Group Os04g0615900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31649974..31652576

Sequence Coding Region

31649974..31651537,31651940..31652017,31652141..31652551

Expression

GEO Profiles:Os04g0615900

Genome Context

<gbrowseImage1> name=NC_008397:31649974..31652576 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31649974..31652576 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccgcctccacctccggcgaccccaccgccgccgccggcgagcccacgccgtcgtcctcagcatccgcgcagccacggcagccggcgtcccgcatatcccacatcgtgcgcacctacctcgacctctcctccaaccccaagaagcgccgcgccgctcccaagagccaccccaagcccgccgccgccgccgccggccaaggcgcccccgatgccggagacgggaaggacggcggcgggaaggcggcggcgaccccatcgtcggcggcgcagcccacgaccacgcggctcctccgcgagctcggcgtccgggtctcccgctacacgcacgaggagcgccgcgacatcgtcctccgctacatgcagaagcggagcggccgccagggcgtcaagcgcgccaccgccaaggccccatcgaggcaggctctcgcggagcggcggcggcggggtgcgagagggcagttcctcggcaaggagggcgccaagactgtagataaaccagaagaagatccagaggtgccgccagaagttattgctaacgctggaggagtgcccatagttggaatggttttcgagaatgaagagaaagcatatgagtattatgctagttatgctggaaatgtaggattcagtgttcgaaaaggattgtgggataaaacggtgaaaaatgttgctaggtcaagggtctttgtatgctctagggagggatttcgctcaaagaatgaggccaaaagacctcgcccagagactaggacaggttgtcctgcacggatagctataaaattggtatccaatggcaagtaccgggtagcagaatttgtggaagatcacaatcaccagcttgctgcaccatttgatatagatatgctgaagtcagagagagtgttgaccaaggttcaaccaggaaaccgaaatgctagtaacattcctccaggatgcaagaattacattcgggccaagtcttcaacacacatgaattcagaggaccttggagctctaatggattattttcgaagaatgaagagtgataatccctctttttactatgccattcaggtggatgaaaatgataaagcaacaaatgtcttctgggctgatgcaagatcaatagtagactatcattatttctgtgatgtgatctgctttgacacaacacacagatcaaatgactgcagaaaacccttagctttgtttttgggtatgaaccatcataggcaaacaatcatatttggctctgcttttctgtatgatgaaactgttgaatctttcaagtggcttctcgagacctttaagagtgccatgtgtgggaaacagccaaagacgatattgacagatcgatctgctgctttgaaggaagccctgagtctcacctggcctggtacaattcaccgttcttgtgtgtggcaaatataccagaatgcttttaagtccttagaacatgtttttaatactcttgaggaattcacacatgattttcaccactgcatgtttgatatcgaggatgaccaggagtttgatgagatatggaatgtgataatcaagaagtacagcctcaaaggagaggaatggttaactaagttgtatgaagatcgggaaaattgggccttgccatataaccggcaaatattctttggggacattaaagggatgttacaagtagaaacttcttgcgttgggctgagagagttcttggattgtgagaaagatctctctaaattttttatgttctttgaaagctcaatggagaagaggaggcaagaagagatacaagctgattaccaagccagcgaaggggcaccaagaatatctctgccactgctatggcaagctgcaaaagtgtatacaccaatcatctttgagttatttagaaaggaatatgaactgtgtatggactgtatggcttatagttgtggggagtttggctctctttctgagtacatgatcactgttaagaataaaactaaagaccagcttgtgcggtttgactcatcagatggcacagttgcatgtacttgtaaaaaatttgaaaatgctggaatattatgttgcc</cdnaseq>

Protein Sequence

<aaseq>MATASTSGDPTAAAGEPTPSSSASAQPRQPASRISHIVRTYLDL SSNPKKRRAAPKSHPKPAAAAAGQGAPDAGDGKDGGGKAAATPSSAAQPTTTRLLREL GVRVSRYTHEERRDIVLRYMQKRSGRQGVKRATAKAPSRQALAERRRRGARGQFLGKE GAKTVDKPEEDPEVPPEVIANAGGVPIVGMVFENEEKAYEYYASYAGNVGFSVRKGLW DKTVKNVARSRVFVCSREGFRSKNEAKRPRPETRTGCPARIAIKLVSNGKYRVAEFVE DHNHQLAAPFDIDMLKSERVLTKVQPGNRNASNIPPGCKNYIRAKSSTHMNSEDLGAL MDYFRRMKSDNPSFYYAIQVDENDKATNVFWADARSIVDYHYFCDVICFDTTHRSNDC RKPLALFLGMNHHRQTIIFGSAFLYDETVESFKWLLETFKSAMCGKQPKTILTDRSAA LKEALSLTWPGTIHRSCVWQIYQNAFKSLEHVFNTLEEFTHDFHHCMFDIEDDQEFDE IWNVIIKKYSLKGEEWLTKLYEDRENWALPYNRQIFFGDIKGMLQVETSCVGLREFLD CEKDLSKFFMFFESSMEKRRQEEIQADYQASEGAPRISLPLLWQAAKVYTPIIFELFR KEYELCMDCMAYSCGEFGSLSEYMITVKNKTKDQLVRFDSSDGTVACTCKKFENAGIL CC</aaseq>

Gene Sequence

<dnaseqindica>1040..2603#560..637#26..436#ggccgatcccaccaccaccaccaccatggccaccgcctccacctccggcgaccccaccgccgccgccggcgagcccacgccgtcgtcctcagcatccgcgcagccacggcagccggcgtcccgcatatcccacatcgtgcgcacctacctcgacctctcctccaaccccaagaagcgccgcgccgctcccaagagccaccccaagcccgccgccgccgccgccggccaaggcgcccccgatgccggagacgggaaggacggcggcgggaaggcggcggcgaccccatcgtcggcggcgcagcccacgaccacgcggctcctccgcgagctcggcgtccgggtctcccgctacacgcacgaggagcgccgcgacatcgtcctccgctacatgcagaagcggagcggccgccagggcgtcaagcgcgccaccgccaaggtgagctcctcgatccatatcatcgccaagaaggaagaattcgcgtttgagtttaggttaaagatggatagaaatttgatcattattagtattattttttgatggcgccattgttggctgcaggccccatcgaggcaggctctcgcggagcggcggcggcggggtgcgagagggcagttcctcggcaaggagggcgccaaggtatatagaccggggatccatggtttctgattgatttctcagagaattgtttgagagatttcgtgtgttccatgtggcgcatttcatggttgttttttagataatgggaatttatataacccggcttctacaccaacaccaacggcttctgaaaacccggctttcatggttggatattgcaagtgtcaagtaggctaatgtagatgcgcattgagttcagcatgtcttggagttagtagcattggtgcacaatcatgtcaaatggagtctgattttaggatttttacagaataccggtagggaaaaacattcttggtacaaatgaccaagaagcactttgatgctgtggtagatgtatgacattgtgtatttgtctgcacttacgttatcgtttcctcccagactgtagataaaccagaagaagatccagaggtgccgccagaagttattgctaacgctggaggagtgcccatagttggaatggttttcgagaatgaagagaaagcatatgagtattatgctagttatgctggaaatgtaggattcagtgttcgaaaaggattgtgggataaaacggtgaaaaatgttgctaggtcaagggtctttgtatgctctagggagggatttcgctcaaagaatgaggccaaaagacctcgcccagagactaggacaggttgtcctgcacggatagctataaaattggtatccaatggcaagtaccgggtagcagaatttgtggaagatcacaatcaccagcttgctgcaccatttgatatagatatgctgaagtcagagagagtgttgaccaaggttcaaccaggaaaccgaaatgctagtaacattcctccaggatgcaagaattacattcgggccaagtcttcaacacacatgaattcagaggaccttggagctctaatggattattttcgaagaatgaagagtgataatccctctttttactatgccattcaggtggatgaaaatgataaagcaacaaatgtcttctgggctgatgcaagatcaatagtagactatcattatttctgtgatgtgatctgctttgacacaacacacagatcaaatgactgcagaaaacccttagctttgtttttgggtatgaaccatcataggcaaacaatcatatttggctctgcttttctgtatgatgaaactgttgaatctttcaagtggcttctcgagacctttaagagtgccatgtgtgggaaacagccaaagacgatattgacagatcgatctgctgctttgaaggaagccctgagtctcacctggcctggtacaattcaccgttcttgtgtgtggcaaatataccagaatgcttttaagtccttagaacatgtttttaatactcttgaggaattcacacatgattttcaccactgcatgtttgatatcgaggatgaccaggagtttgatgagatatggaatgtgataatcaagaagtacagcctcaaaggagaggaatggttaactaagttgtatgaagatcgggaaaattgggccttgccatataaccggcaaatattctttggggacattaaagggatgttacaagtagaaacttcttgcgttgggctgagagagttcttggattgtgagaaagatctctctaaattttttatgttctttgaaagctcaatggagaagaggaggcaagaagagatacaagctgattaccaagccagcgaaggggcaccaagaatatctctgccactgctatggcaagctgcaaaagtgtatacaccaatcatctttgagttatttagaaaggaatatgaactgtgtatggactgtatggcttatagttgtggggagtttggctctctttctgagtacatgatcactgttaagaataaaactaaagaccagcttgtgcggtttgactcatcagatggcacagttgcatgtacttgtaaaaaatttgaaaatgctggaatattatgttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0615900, RefSeq:Os04g0615900