Os04g0616900

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Revision as of 11:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0616900| Description = Conserved hypothetical protein| Version = NM_001060418.1 GI:115460565 GeneID:4337003| Length = 4438 bp| Definition ...")
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Gene Name

Os04g0616900

Description

Conserved hypothetical protein

Version

NM_001060418.1 GI:115460565 GeneID:4337003

Length

4438 bp

Definition

Oryza sativa Japonica Group Os04g0616900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31738826..31743263

Sequence Coding Region

31738859..31739022,31739114..31739431,31739966..31740112,31740293..31740373,31740465..31740505
,31740618..31740659,31740733..31740795,31741414..31741485,31741958..31742091
,31742470..31742546,31742859..31742910

Expression

GEO Profiles:Os04g0616900

Genome Context

<gbrowseImage1> name=NC_008397:31738826..31743263 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31738826..31743263 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctctccggcgatgccgccgtcgtctccggctccggcaaccgcaagcgcaagcgccatgtgcagcagcactccctcgagtacccctgcgtgtcgcggctccgccaccgtcgcctcctcgccttcctcagccgccacgactacgactccaccttcgacgcgctggtgcaggagacgtccgtgctcttccgcgtggggcacatccaggcgctggtgaggcagggccggtgggcggacgccgccagctacgtcaaccgcttcgtgccgccgtctcgcgtgctcaccgatgccggcctggtcttccacgagttcctctacatccaccacgtcctcgactgcatcgtcgccggcgaccacttgcggggcgctcaggtggccgccagctaccagcgccacgtcagggacaaccccaacccctcccatggcgccatcaagctcatacgcatcctcctcaccattctccactgccatccaatcagggcgttcctcaactggcatctggtgaggtacaaggcggccgagatcatcaaggacttgatccctcagatccccgagttcaacgacctgctaaagctaccgaaaggtggccccatcaagccacacaacatcctccccattgggtccagttctcatcggaggcgccacgtgaagaatgaagaccggattccacctgatattgcccgcttctatcttcagaagaagagagggctgccctcttctactatctgtcaggagagatattacacaggattatcacgtaatgcagcaaactggcttgcagatatcatcgacaaatctttgcaagctggtgtgctgcgtgatggatatccatttaaacactcctgtaacgaaggtgttactggtgctccaattggtttggatagtcctgctaacagttatgggatctcaacacaaactattgcagacatgatgcgtccgttgatcattagtgatatcggtcaaggttcagttgcaagaaacaatccaacaaggccagaaacaactgctcaccaagcgattagtccaacaacgcaacagataactacggagtttgttcaacattcagaatcacaatttcaagaatacaactcccagatggatggaagagtcagaattgttgaaagtggcatgaaaaggtcgcgttccttcggtggtggttgcagctcatccgttgaaatttcgagttga</cdnaseq>

Protein Sequence

<aaseq>MELSGDAAVVSGSGNRKRKRHVQQHSLEYPCVSRLRHRRLLAFL SRHDYDSTFDALVQETSVLFRVGHIQALVRQGRWADAASYVNRFVPPSRVLTDAGLVF HEFLYIHHVLDCIVAGDHLRGAQVAASYQRHVRDNPNPSHGAIKLIRILLTILHCHPI RAFLNWHLVRYKAAEIIKDLIPQIPEFNDLLKLPKGGPIKPHNILPIGSSSHRRRHVK NEDRIPPDIARFYLQKKRGLPSSTICQERYYTGLSRNAANWLADIIDKSLQAGVLRDG YPFKHSCNEGVTGAPIGLDSPANSYGISTQTIADMMRPLIISDIGQGSVARNNPTRPE TTAHQAISPTTQQITTEFVQHSESQFQEYNSQMDGRVRIVESGMKRSRSFGGGCSSSV EISS</aaseq>

Gene Sequence

<dnaseqindica>34..197#289..606#1141..1287#1468..1548#1640..1680#1793..1834#1908..1970#2589..2660#3133..3266#3645..3721#4034..4085#caagctcaagcgcttaatacgaatctggctgccatggagctctccggcgatgccgccgtcgtctccggctccggcaaccgcaagcgcaagcgccatgtgcagcagcactccctcgagtacccctgcgtgtcgcggctccgccaccgtcgcctcctcgccttcctcagccgccacgactacgactccaccttcgacgcgtaagcccgagcaccaccaatcttcctcctcctccttcatcctctcgatctctcgcctcgcctcaatggcaccgacttgtttgcaacgcaggctggtgcaggagacgtccgtgctcttccgcgtggggcacatccaggcgctggtgaggcagggccggtgggcggacgccgccagctacgtcaaccgcttcgtgccgccgtctcgcgtgctcaccgatgccggcctggtcttccacgagttcctctacatccaccacgtcctcgactgcatcgtcgccggcgaccacttgcggggcgctcaggtggccgccagctaccagcgccacgtcagggacaaccccaacccctcccatggcgccatcaagctcatacgcatcctcctcaccattctccactgccatccaatcaggtacgactacaacaacactttttgtagagtagatcaggattaatcctatcggttcagcggatttgatcgggcctcaccaaaataccgaaatttcggtctgaaattttaaacaaaatttagttgaatttaaataaatattaccaaaattcatgaaaaaattaaaaattttcggccgaagtaatatcgtatcggaggggaaatttccaaccctggagtagattaacttaacagcccaatgggttgattatgggagggatttagggagatcggtgtaacagataacaacagagacatatataagtcttaacagttctttttttttttagagaaagacaatttttacctagcctcaacatccaaccggatatatacagccctttaagttgggaacttaccccatcaaacaaggaacttagccctcaacactgcaaccagccctttcacaagtcttaacagttttgcatgcttaatttactgttttccaagcatctttcaccatccatctctttcttggaacggaattattatgcatagggcgttcctcaactggcatctggtgaggtacaaggcggccgagatcatcaaggacttgatccctcagatccccgagttcaacgacctgctaaagctaccgaaaggtggccccatcaagccacacaacatcctccccattgggtccaggtaatgctacttccttcgatttatactgcagtaattcagcagctgatctgaatttggtgaccctttgtgcccgcattgctccatatggatcactatcagtgtacagctgatttccattgtcagtatgtatcaactgctgtgacttcattttatatattaactgaaaatctttgctactagttctcatcggaggcgccacgtgaagaatgaagaccggattccacctgatattgcccgcttctatcttcagaagaagagagggtagaccacaattcaatttctctccattttttccactgtttcaggattttcgacattgacacacatgacacatgtgcattgctttgtgcaggctgccctcttctactatctgtcaggagagatattacacaggtatataagtttataaatcgattatatctctccatattcatatctagatttaataagcagaaccagcaatattattaggcatgatacttataaccatgtttttcaatgtcaggattatcacgtaatgcagcaaactggcttgcagatatcatcggtaatacttgtttgccttgtgtctcctgcctttgttgacttcccattgtcacttgacttccgaaccttttcagacaaatctttgcaagctggtgtgctgcgtgatggatatccatttaaacactcctgtaacgaaggtagctgaaaacagttatggagtatttgctcagataaatatcggtaccattttctttgcgtgaagttcattggagccttttgggccaattatgcataagatttctttagctgctttcgagtttgacctctcctttcctttcaatttaagtgttggctttgtgcgcaggatgtttagagaacatagagaaactcatataaaatggcaatgaactagtcaaccagcccatcataattcgttttttgcacttgactttatcagtgttacaatttacaataatttgttttctcttaatcaaacaaattcactgtgttctatgcttagatcttcctgtattatggcctatatattcacctgacacagcatgtacatgctgttggcgctgcttattttttgttcttgctacatctctgggcctatttgtaggaccatgaatcaatcttttaaaaccctttgtggaaacagatttcgttcagtggtccatcgaagcatttagatgttaattgatttccaattttctaattgttagcaattcagatttcaaaacgcattgagcttagtagtcttgctacacttggtgggtacctgctgtcatttctaattcctgaaaacattgcaggtgttactggtgctccaattggtttggatagtcctgctaacagttatgggatctcaacacaaactattgcaggtaaaatgtattagtaataacatcccatgccaacagccatatttcaatttcattattcaattatatagagcagcatattgtttcttggtcacatgcatatgttttgtattacaattcctgctaaaatgatggaataccatcaaattcttgcatgtgaattaagtgcacactcttacttgatagttatcattgaagcccaggcaccatgaagccccaatttagcgtcctatatatgtactattaggattattatcattgttaaaagtatatcgctgagtcagcatttttttctttttgagggaaatcacatctgtaaaatcaaatgggaacaaccctctcttttcatctataactataatatatgaaatatatattgtcaggagaatattaaccatgtagttgagttggtaataatataccacaatgatgcttactccaggattccagctaacttgagagtacttctgtgcagacatgatgcgtccgttgatcattagtgatatcggtcaaggttcagttgcaagaaacaatccaacaaggccagaaacaactgctcaccaagcgattagtccaacaacgcaacagataactacggagtttgttcaagtaagcatcacttggcactttctataaacaagaaaaaattgactgcaaaaatgaataaataagttcagtactgtacctcaccttagtcatctacaataggccaacgattgcttactgatttccaactgctgctcttttctaagaataattttgtgctacatatgatctcttgttcatgaaccatgatcgtggatcgcatacaaatttgttttctttttgttgtgtgtgttctttacttctttagggtggggcatgtggagttatcactagcttgattcaacatcaaacgcagagtatattttcacaaaatatttctattattgcattggaaccttgccaattgatagggcagtaacaatacttacttcttttactcagcattcagaatcacaatttcaagaatacaactcccagatggatggaagagtcagaattgttgaaagtggcatgaaaaggtatacattgctaatccaatccttcatgcatggaaacaaatctggtttctaaggtttactgtcaatctccaagtagtttcaacaatgcttttactggattttgaatactgggacccttggaggggcttacattagcagaatttgcctattttattattatttccaattcgtgagttttctgtttcttccctatggattctgtgattaatttaatttacaatgtgtggcatcattcaagtttggctttgatttatttccaatcttctgcatatatgagaaatgtagcaagttatactcaatttttccgtccaggtcgcgttccttcggtggtggttgcagctcatccgttgaaatttcgagttgatgacttctttagccggactggccggaagaatgaccagttcagtgacttgggttggtggtttcggtgttctcttgtgcttctcatcgaggggagacttaattgaatgagttaagggagctgttagaatatttagttagtgtagtctatgtcaatttttaccatttttagaacaatcacaatttgtggcttggatatactggtttcgcttttgtcttaagccctatagggcgttttcttgtggcgtggaattatcactccatatcctttaatagaccgtcagtgatgaatactgccactcacaaaattactttttatgctaccatttaaatgagatcattgttattctttgcctc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0616900, RefSeq:Os04g0616900