Os04g0618200

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Revision as of 11:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0618200| Description = The start codon is not identified.| Version = NM_001060425.1 GI:115460579 GeneID:4337011| Length = 3713 bp| Definit...")
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Gene Name

Os04g0618200

Description

The start codon is not identified.

Version

NM_001060425.1 GI:115460579 GeneID:4337011

Length

3713 bp

Definition

Oryza sativa Japonica Group Os04g0618200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31801932..31805644

Sequence Coding Region

31802100..31802208,31802767..31802891,31803270..31803383,31803471..31803578,31803682..31803773
,31804184..31804325,31804418..31804512,31804585..31804714,31804798..31804942
,31805049..31805275

Expression

GEO Profiles:Os04g0618200

Genome Context

<gbrowseImage1> name=NC_008397:31801932..31805644 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31801932..31805644 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cctctccacgctgcgcggggccgcctccggcgagcaggctgggcctcgggcctcggggcctcattccaccgccctgcgcctctcggttcggatcggcttgaaggtgaaggtatggacttcggtgattctagacgcaagcctaatgtcgtcgggaagttcaccgtagctgttgcactcacggtcatgtgcatcattgtgttgaaacagtcgcctggttttaccagtacaagtgtgttctctcgccatgaaattggtgtgactcatgtgttggtgactggaggagctggatacattgggtcacatgctactcttcgtctacttagggacaactaccgagttaccattgtggataacctttctagagggaacatgggagctgtcagagtccttcaacgtttgtttccagagcctgggaggcttcagtttatttatgctgatttaggcgatgcgaaagctgttaacaaaatattttcagaaaatgcattcgatgctgttatgcactttgctgccgttgcttacgttggtgagagcacgttggagccactgaggtactaccacaacataacatcaaatacattgacagtgcttgaggcaatggcagcatataatgtaaaaactctgatatactcaagtacttgtgcaacatatggtgaacctgacacaatgcctatcacagaagcaacccctcagaatcctatcaatccatatgggaaggcaaaaaagatggcagaggacatcattttagatttctctaagagatcagaaatggcagtcatgatcttaagatacttcaacgtcattggatcagacccaggggggcggttaggggaagctccacgaccagagctgcgtgagcatggacggatttctggtgcttgctttgatgcagcactgggaatcattccaggtttgaaggttcggggaactgattaccctacagctgatggaacttgcataagggactatattgatgtcacggatctcgttgatgctcatgtgaaagctcttgataaagctcagcctggcaaagttggaatctacaatgttggcacaggacatggtagatcagtgaaggagtttgtagaagcatgtaagagcgcaacaggagctagcatcaaggtttcattccttacccggagaccaggagactatgctgaagtttacagtgacccatccaaaatccatgacgagctgaactggacagcccgttacattgatcttcgcgaaagcctttcaactgcatggaaatggcagaaagcacacccgaatgggtatggatcggcctga</cdnaseq>

Protein Sequence

<aaseq>PLHAARGRLRRAGWASGLGASFHRPAPLGSDRLEGEGMDFGDSR RKPNVVGKFTVAVALTVMCIIVLKQSPGFTSTSVFSRHEIGVTHVLVTGGAGYIGSHA TLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPEPGRLQFIYADLGDAKAVNKIFSEN AFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVKTLIYSSTCATYGE PDTMPITEATPQNPINPYGKAKKMAEDIILDFSKRSEMAVMILRYFNVIGSDPGGRLG EAPRPELREHGRISGACFDAALGIIPGLKVRGTDYPTADGTCIRDYIDVTDLVDAHVK ALDKAQPGKVGIYNVGTGHGRSVKEFVEACKSATGASIKVSFLTRRPGDYAEVYSDPS KIHDELNWTARYIDLRESLSTAWKWQKAHPNGYGSA</aaseq>

Gene Sequence

<dnaseqindica>169..277#836..960#1339..1452#1540..1647#1751..1842#2253..2394#2487..2581#2654..2783#2867..3011#3118..3344#attactctccttccctctcctctcctctcctctctcgccatctctctctcctccgatctgcgcagccagccggagccaccgccgcctctctgtcgccgcctcgcccgcgggggctccggcgaacgggccgcccgcctcgacctcccctccttcccgtcgccgagctagcctctccacgctgcgcggggccgcctccggcgagcaggctgggcctcgggcctcggggcctcattccaccgccctgcgcctctcggttcggatcggcttgaaggtgaaggtatttgcatgcatctctctctcggtctctctcccgcttgcgtttagtctggagatccgtccggactggtggtgactttctttttgcaacgcgggaatttttgtctggttcttattgcttacgggattcccgtgaaggtgctgcgttccaaaggaatccttcgattgattgatttatttcagtcgaattaaccgtccgttttgctcctgatgatttccttcgtttgtttttgatgcgcagtcttattccagtttgttttcacccatttttttttcaaatataaatatgccccaattttgggttgttcatgaattaggttttaattaatgaggtgtgttatcttgtaattttagcttcgactgtgtgtatgcccgatcaaattttctagcaattttttttctaacctgtacttacgtgtaaatgcaatactgatttcctcaaatgggtgaatgttgtacaccttgtggtggctttcagtacagagttggaggcaggaaattctgaatttacacccgaatttgccggtacaacttttaatttgccaagtcacatttgcaggtatggacttcggtgattctagacgcaagcctaatgtcgtcgggaagttcaccgtagctgttgcactcacggtcatgtgcatcattgtgttgaaacagtcgcctggttttaccagtacaagtgtggtaagtgccgaatctctccacaactagcccacttcactgtcgaattgttgattgctgttgagtcctcacttctcgttgttgtattgttcaaacttgatttaattgtgacacgtaagtttcatttggaacaatcgcatattgtctgacagaaagaggttcctttaacatgattgaaagaaacacattgatcgtccattccatttgatgaattcactgttcatttatctgtgttctgtgctagtagtggttattttctatgcaccatcgtagtttccaataaagcacattcataattccattggaagcaaagctgtttttgtgaagcatttcagattgtcatctgatctagttttcatgatacattcacatgctctatagttctctcgccatgaaattggtgtgactcatgtgttggtgactggaggagctggatacattgggtcacatgctactcttcgtctacttagggacaactaccgagttaccattgtggtaaatttcttattccagcttcatgtttttattcctaactcaaagagcttttatgttacagcaatttcttccatgtgatctttacaggataacctttctagagggaacatgggagctgtcagagtccttcaacgtttgtttccagagcctgggaggcttcagtttatttatgctgatttaggcgatgcgaaagctgtatcctttttctctacaatgtgaactttaataccttattatagccatttttccatacattcatgtgttggtgtgatctgttttgcacttaaccaatagccaggttaacaaaatattttcagaaaatgcattcgatgctgttatgcactttgctgccgttgcttacgttggtgagagcacgttggagccactgaggtaaggcattgatgtgctaatgttcttgtattcatgttacatagatggtggttatttatatattgcatgttcatgtgcaatcctttgatgtgttcagagcaatgcaaactgctcttggttatctctattattaaacaaaactgctaaacatgacaatctatattgaaaacatactatatagtgaaaatggaaaatataggcattccatctttttcaatgttggcattttttgccgataacatacttttggcacgagcaatttgaactgtgaagattagtgtgaaagactgcctaatgtaaatgtatgtgattttagttgataatttgttttccttttttgtatccttcagaaataatctgttgttaatgctgttactattacatgatctgtgctaatactgcaataacaggtactaccacaacataacatcaaatacattgacagtgcttgaggcaatggcagcatataatgtaaaaactctgatatactcaagtacttgtgcaacatatggtgaacctgacacaatgcctatcacagaagcaacccctcaggttggcttatcaatgcatggacttcttatctcaaagtttaaagaatatcatgcacaattcactgattctagacaatcttttaaccaatgcagaatcctatcaatccatatgggaaggcaaaaaagatggcagaggacatcattttagatttctctaagagatcagaaatggcagtcatgatcttaaggtccgcctctcctatagcctatactaaaatttaattcgtagagaaaactcacttcgttttcttttgaattagatacttcaacgtcattggatcagacccaggggggcggttaggggaagctccacgaccagagctgcgtgagcatggacggatttctggtgcttgctttgatgcagcactgggaatcattccaggtttgaaggtactgaacatgctcacttcagcatgtgtcctgacttttcacatggtaacatactatggtatatgactttcaccctgctttaggttcggggaactgattaccctacagctgatggaacttgcataagggactatattgatgtcacggatctcgttgatgctcatgtgaaagctcttgataaagctcagcctggcaaagttggaatctacaatgttggcacaggacatggttgttaaaaatatcactaatcatctcaacacatgcacaattatgtactcatttctctgcatgtatttccttgtttctgattgtgctttgctcatgattttatcaggtagatcagtgaaggagtttgtagaagcatgtaagagcgcaacaggagctagcatcaaggtttcattccttacccggagaccaggagactatgctgaagtttacagtgacccatccaaaatccatgacgagctgaactggacagcccgttacattgatcttcgcgaaagcctttcaactgcatggaaatggcagaaagcacacccgaatgggtatggatcggcctgattcagggtttaatagattcagacttaaggtacacagattctcaggtccatgtgcagaaatcatatatccttcagaaaattggttcttcagcacaaacatagtgccaggcacagaagtgttctgaatttttttggcagcatttggaagaagatacagaaagaatggcccctctattcctggcttaggatcatacatatagttttttttttccttgacattttttttaatcttttctactcgttaaagcataatataataaccaatagaaaatgtgttgtagacaaggtagataactatcatgtatgaacgttcatggtgttgaatgaaaggatatatgaataagtagatgtttgcttattagtggaagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0618200, RefSeq:Os04g0618200