Os04g0618500

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Revision as of 11:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0618500| Description = Similar to Gamma-SNAP (Fragment)| Version = NM_001060427.1 GI:115460583 GeneID:4337014| Length = 3985 bp| Definitio...")
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Gene Name

Os04g0618500

Description

Similar to Gamma-SNAP (Fragment)

Version

NM_001060427.1 GI:115460583 GeneID:4337014

Length

3985 bp

Definition

Oryza sativa Japonica Group Os04g0618500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31810719..31814703

Sequence Coding Region

31810910..31811014,31811408..31811537,31811666..31811745,31812015..31812093,31812797..31812934
,31813005..31813163,31813248..31813332,31813424..31813491,31814546..31814598

Expression

GEO Profiles:Os04g0618500

Genome Context

<gbrowseImage1> name=NC_008397:31810719..31814703 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31810719..31814703 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagctcgtcgtccgaccccgacaagctcatgtccaaggccgacaagctaacaaaattgagcttcacgagatggaatgccgattggaagagtgctacctccttgtatgagcaagctgctattgcttataggttcaaaaaggagaatgagaaagcaaaggatgcctttgagaaggcttcaaaaggacaggaaatgatttcttcaccctgggatgctgctaaacacatggaatctgctggtgctttagcgaaagagcttggacgctggaatgaagtttcagatttttatcgcagagcatcagaattctatcgtgaatgtggaagagcacaacctgcctctgatgctcttgcaaagggtgccagtttcttggaggataacactccagacgaagcaataaaaatgtatgatgaggcctgttcaattctagaagaggatggaaaggaacagatggctttcgatttgtatcgtgctgctgcaagtttatatgtcaagctcgagaagtattcagatgctgcagcaacttttctaagacttggttcagctgctgataagtgtaatgccatcaacagccagtgcaagggctatttgagtgcaatcatcatctacctttatgcccatgattttcaacaagctcagaaatgttacaatgactgctcagaggttcaagccttccttaacagtgaccagaatcgatgtgcaatgaaactgctgtctgcttatgaggaaggtgatgctgaaggaatcaaacaggctgcacaatcaagtgccatcaaacaccttgaccatgtggtaattcgacttgcaaagaaactacctacgggtgatctgcagaccatcaagaaattggcagacgatgacggcgaggattctttggacgagaatgacctaacttaa</cdnaseq>

Protein Sequence

<aaseq>MASSSSDPDKLMSKADKLTKLSFTRWNADWKSATSLYEQAAIAY RFKKENEKAKDAFEKASKGQEMISSPWDAAKHMESAGALAKELGRWNEVSDFYRRASE FYRECGRAQPASDALAKGASFLEDNTPDEAIKMYDEACSILEEDGKEQMAFDLYRAAA SLYVKLEKYSDAAATFLRLGSAADKCNAINSQCKGYLSAIIIYLYAHDFQQAQKCYND CSEVQAFLNSDQNRCAMKLLSAYEEGDAEGIKQAAQSSAIKHLDHVVIRLAKKLPTGD LQTIKKLADDDGEDSLDENDLT</aaseq>

Gene Sequence

<dnaseqindica>3690..3794#3167..3296#2959..3038#2611..2689#1770..1907#1541..1699#1372..1456#1213..1280#106..158#gctcgactcaacgcagcacacgcaagaggagtcgtgggagtccaggagaggaggcggaggcgcggaggagagaggaggaggaggaggaggtggttggtctccgccatggcgagctcgtcgtccgaccccgacaagctcatgtccaaggccgacaagctgcaagtcccttcatccccccatctctctcgcttttctaactccagatgatccgcgagcgccccatccgatttctgtcccttgtttttttagattacggatttttggcgtattttctgtgaatgaggccccttactcgagcgtattaagctgcgccctcgtcaaattcatcacgtcgtagttggcgaatgttagattttgcgttttggatcaaggactgggaactcgtgtggatctgtacctgatctgtagatgggggcagggctaccgttcctatttccaatttcgtggtaccgatttaggattttctcaggagaggaattgcctgtcagtttagttttagcttagtttgtttggtgcaaatttggtgagattttattcaaggtcatgccatgttttggggggaaaggtcatagaagcgagcgcggacgctttgttttgcggcaattttgtttacatatgtgtgctgtgtgggagttaccagcagactttatctcctactatgtagtattcgattttctgttcaaatatcttcagaatacagaatgcaagtacgatacttgtgctacctgtatcaattcagcagtggatgtgcttgtctgtgtaacttcagaagtggaaaatcagccactcgtcatcatttacagtattgttcagaatggatatatgtggtgcaccattgtttagacatgcaaactagagttcacttccagcactcgcacagaaagattacttctcaatgtgtctgattgggatatcttgtttgctctcgttttcatgccagtgcttttgagttgattttgatttaaatactgtcattgttttcatgtacttcctctgtttcgcgttataagacgttttgggttttaaatagattcgtgtatgatccatgtatgtgcttcatatgtatgtcaaaattcatatgaatgttagtgaatctagacgagtgatggaggacccaaaatgttctaagtactctctgtcttaaattgctcccagttcatccacttcagagttagctatatgctaaatatgaacattccttttgcttcgcagaacaaaattgagcttcacgagatggaatgccgattggaagagtgctacctccttgtatgagcaagctggtccgttactttttttgccatgttctattttctttctgtcaatttgcttccctgtggtgtatatgacagaactttcatatctactttaaagctattgcttataggttcaaaaaggagaatgagaaagcaaaggatgcctttgagaaggcttcaaaaggacaggaaatgatttcttcgtatccttcagaaaaaaaatttatagctgttgtattttcacatgattgaactatcacttaatgcacccttaactagtttaatataccctgggatgctgctaaacacatggaatctgctggtgctttagcgaaagagcttggacgctggaatgaagtttcagatttttatcgcagagcatcagaattctatcgtgaatgtggaagagcacaacctgcctctgatgctcttgcaaagggtgccaggtaattcaaaagaaatctgaaacttacgtgaacattgtgaaggattattgttctaacttgatgatatcagtttcttggaggataacactccagacgaagcaataaaaatgtatgatgaggcctgttcaattctagaagaggatggaaaggaacagatggctttcgatttgtatcgtgctgctgcaagtttatatgtcaagctcgagaagtaaggatattccaacatattccaacctgcttaatatttgtttattatattattcttctttccattttttcttttacggatagtttttaatctttttctttcttgctgggtaagttgtcattgtagaaggaattgtcaagtaaaccaataatatttgatcctttgtggcacttgctttaatatcgattatatgtggactgtctctgttttgatataatcacttcccatctcacacttctcattaattacaggaagttcttttcatagacctactagcatatctgtgccggtccatttttcctgaacagtttaaccttactactgtgacggttcttgatagatttttacattcaccctttgaatgattagagcctatcaaattgtttaattgttgatgatttccattcttactacaacctttcaagcttgaagttatcgggaatcaataaattgtcattactatgcatggttttatttaattctgcaacaatactaggaggtttcgctgtacgtctgtttattataactattgaggtcaaatgtacctggctttgatgtgctgtttaggcgtacccttttgctctttgcttgcacatgttttcacactttcttctatggttttgctctttgtttgcatgcattactgctaatctcatttctttgctcatttgcatttattcctatctttggcgatctctcacaggtattcagatgctgcagcaacttttctaagacttggttcagctgctgataagtgtaatgccatcaacagccagtgcaaggtaatatttaaattgtttatactgagaatgtgcctgcttaatttcataggggtttgtacttgatgaccaaagctagctactagctagaaatactatgcaatgcaatctgagaatttccttttacagataataagaaacttccttgaaattgtaaatttgtttatgaattccaaatgggaatggaataaatattgattatccatgtaagcattatcgaaatttgagcaataaacttatctgattctgtaattgttacttttaatatgcagggctatttgagtgcaatcatcatctacctttatgcccatgattttcaacaagctcagaaatgttacaatgactgctcagagtaagttgtacattcatggtagttactatcactgtaaaagttggtacatgtgcattgccattgatatattttcttgcaccaaagcccaaacatcactttcattgttattaccttctgctacattacagggttcaagccttccttaacagtgaccagaatcgatgtgcaatgaaactgctgtctgcttatgaggaaggtgatgctgaaggaatcaaacaggctgcacaatcaagtgccatcaaacaccttgaccatgtggtaatattttgagtttcttagttacaaggccatccgatatctgaactatatataccaggctgttatttcaatctccttatacgattagacagattggatagttagtatgcgtaaaacagtgtgctaggagctgaggcgttacaggttgaagatgttactcatgatctcttttttagtcaacattaccgctctatactatattgattcctggatcatttgattaagcagtgatacctcatcaattatcaggccatcacttatcatcataccataggacaaataatagtattatcagctaaaacatagtctgttccatctaaaatgatatctgctcgattgttcgtgtgcttgttcatccttcttcacttcgatttatggtgaatattactgcaggtaattcgacttgcaaagaaactacctacgggtgatctgcagaccatcaagaaattggcagacgatgacggcgaggattctttggacgagaatgacctaacttaataccaaactacccgtaccgggagacgctgagaaagcaaatatttgaggttgactcatgttaccgttgatgaacatgagcgatttgtaaaaagaagatatcgatgtacacggtacaaagtacaaacttgtgtgaggcagtctgtatcttgatatttatcatgctcagctcaactgtcatatctgatttctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0618500, RefSeq:Os04g0618500