Os10g0135600

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Revision as of 08:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0135600| Description = Alpha/beta hydrolase family protein| Version = NM_001070656.1 GI:115481055 GeneID:4348060| Length = 5224 bp| Defini...")
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Gene Name

Os10g0135600

Description

Alpha/beta hydrolase family protein

Version

NM_001070656.1 GI:115481055 GeneID:4348060

Length

5224 bp

Definition

Oryza sativa Japonica Group Os10g0135600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:2180521..2185744

Sequence Coding Region

2180774..2180980,2181838..2181867,2182598..2182724,2182806..2182952,2183846..2183976
,2184052..2184189,2184604..2184702,2185218..2185448

Expression

GEO Profiles:Os10g0135600

Genome Context

<gbrowseImage1> name=NC_008403:2180521..2185744 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:2180521..2185744 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccacacgtgcagtcagctcctgcggcggcgaccgcggcggggatgtccgcggcgtcggcgcccgcgccgaggaggtgggaaggggtggaccaggcgctggagcggatggtgctcagggcgtgcctcgaccaggcgcccgagcgccgccgcgtccgcgacgcgttcaaggacgtgcagctcagcatcgaccactgcctcttcaagggacagtatagcgatattggaacaaaggagtcatacgagaaaaactccaggggcgtggagattttctcaaaatgttggtatccagagaatcatcgcataaaagcaattgtttgtctctgccatggttatggagatacctgtaccttttttctcgatggtattgctaggaagattgcttcagctggatatggagtgtttgcattagattaccctggttttggtctctcggaaggacttcatggatttataccaagttttgacactcttgttgatgatgtagcagaacattttactaaggtcaaagaaaatcctgaacatagaggtcttccaagctttctgtttggtcaatctatgggtggagcagttgcattgaagattcattttaagcaaccaaatgaatgggatggtgcaatactagttgcgcccatgtgcaagattgcagatgatgtgattccgccttggcctgttcagcaagttctaatttttatggctagacttcttccaaaagagaagcttgttccacaaaaagatttagcagagttggctttcaaagagaagaaaaaacaggagcagtgttcttataatgtgattgcgtacaaggataaaccacgtctccgaacagctttggagatgctgagaaccacaaaggaaatcgagagtcgtttggaggaggtttcgctgcccattatcattttgcatggtgagggtgatttggtcacagacccagctgtgagtaaagctctctatgataaagcgaagagctcagataagacgcttcgcctttataaagatgcatatcacgctatcttggaaggtgaaccagatgaggcaatttttcaagtcctcgatgatataatttcttggctggatcagcattctacaaagaaagttccatcgtcataa</cdnaseq>

Protein Sequence

<aaseq>MPHVQSAPAAATAAGMSAASAPAPRRWEGVDQALERMVLRACLD QAPERRRVRDAFKDVQLSIDHCLFKGQYSDIGTKESYEKNSRGVEIFSKCWYPENHRI KAIVCLCHGYGDTCTFFLDGIARKIASAGYGVFALDYPGFGLSEGLHGFIPSFDTLVD DVAEHFTKVKENPEHRGLPSFLFGQSMGGAVALKIHFKQPNEWDGAILVAPMCKIADD VIPPWPVQQVLIFMARLLPKEKLVPQKDLAELAFKEKKKQEQCSYNVIAYKDKPRLRT ALEMLRTTKEIESRLEEVSLPIIILHGEGDLVTDPAVSKALYDKAKSSDKTLRLYKDA YHAILEGEPDEAIFQVLDDIISWLDQHSTKKVPSS</aaseq>

Gene Sequence

<dnaseqindica>254..460#1318..1347#2078..2204#2286..2432#3326..3456#3532..3669#4084..4182#4698..4928#acggtttcttcctcctcctcctctctctctctctcctctgcttctctcccaaattcgccacctctcctcctcctctgatccctccccacgccgccggcgagggcacggccacaacggccgcggcggcctccgtgcgccggagacaactagactactacaactactactactactactactactctttctctctcttgttgagaggagcggagatccatccgtgcaggctccggggggtggtttcgtgtgggatatgccacacgtgcagtcagctcctgcggcggcgaccgcggcggggatgtccgcggcgtcggcgcccgcgccgaggaggtgggaaggggtggaccaggcgctggagcggatggtgctcagggcgtgcctcgaccaggcgcccgagcgccgccgcgtccgcgacgcgttcaaggacgtgcagctcagcatcgaccactgcctcttcaaggtcccccctccgctttccctcccattttctttccttttctttttttcacttctttacacacccccttttggaaattagagtcgatataagatgcagtttttcggttccttatgctgcggcaacaacaattgaatggatgattgacagtgtgatgctaagagtttatcgtttctgtgtcgaaacatgcgcatcgccatgcctgaagatcttgatggatgagggttatggaggtttcagtgtttgctgtagtcaggatggatggtgatgatgctcgtgcgctagattttgacctggaaaacaattactagacattttctaggcacaacctgttcgaagaggacctagagctttaattagaatggtccaaacttggggtctgttgtgcccacacaaagccttgtgattggtccaggtgtggagatggatatttgccaacagacattttgagtattaattgcaatggcttttgtagttgattaggacgtcgatcagtaccgagatttgtgtgttgtacaaggcgtaaatacatttccgactgattaaggtttgcactgttcaaaagttggaaagtggatctattgtcaacccaagcaggttagggcctataatagtgacagatcattattaaggtgtttgattttaacagcagcatttatgaggtaccaaactattgcatacatggaatgatatttagagaggaaaaaacatatgcacagatagttccaccatttaagtaccaccaaaatttcaagtcttagtttgctatgccatgatgcttttatttgatctaaaaaactttagttgttctgatatgcgatggatcatttttcttacttgcatttgtttctatgatgcagggacagtatagcgatattggaacaaaggaggtgctatttcttgctctagctattattttacagtttcttcatgcagtatgtttctgcagttaagtggcttaactgctgcaatacataaatttctgttgcacatattgcatgtaagactatttggcatatagactctgtccatcttcttcgcattactgtatgccccacagctaagactatgtagagagagaggttccactataaaatctcagcaggcattggtgattcattttatttggttgatctgcaaactagtgttaggcagaaatactgaaatattgatgcaatgtaggataagtccttttcttttttagaataaaataccaaaagtagtgctttactgcaatgcagaaatactgaaatattgatgcaaggtaggacaagtccctttttttagaatagaacaccataagttagtgctgtactgtagttgctgaagtgcactgaacatatctggccttattagttcatcttttgattccgttgaatatgttttgctatttatctatgcttaacagaagcttgctattttaatgatcattggttgtggttcgcaaggtagtggcactgtgagatggtatgctgaatatgttaattctcaatagtgctcttaactcctaaaatctgccgacatatcaatcgatgctttgctcttcagaatttttgctaacttgatgataagttattaatttttccatcattgcaatgtgacacttcctttcttcgacagtcatacgagaaaaactccaggggcgtggagattttctcaaaatgttggtatccagagaatcatcgcataaaagcaattgtttgtctctgccatggttatggagatacctgtaccttttttctcgatggtacacgtttccctttcatgcaagttatttgtctgataccttggttttttgtcacatttttatagtccgtttttcttgcaggtattgctaggaagattgcttcagctggatatggagtgtttgcattagattaccctggttttggtctctcggaaggacttcatggatttataccaagttttgacactcttgttgatgatgtagcagaacattttactaaggtcaaaggtatgcttccattaaatcatttctggtttctcactctgccttttttttttctatttattttttttggaacagttgataagtgtcaatatattttcagctagttcaaatgtacatgtcttcttttatgaaatttccttgaatgaaattcaaatgccaaatttagatacaacttaccaactaatatgacaccataatacagttgcaacatatggtatagttaccacaagtttcatttctcttttatcctcaggtttttaaaatcaacaaaatatacatattgtttgatcttttaaacttctggtgttggaaatagttgctttatatagttttgtgaaatgtgactgaagagctacttcatatcattttgttctcttcccggttaggaaagaaaacacacaccaccttcaatccaaaatatatgttgtttcagctccatgcatgcatgcagaacataatgctttaatttggcatagtttagagtttactcaatgcttgtatgcccatatgtctacacaaaaaagaaaaaaaaatcgtacgggcatttggtggaaaacattgcagtgataaaactaaactgactaccttaggagttaattaactataaactgttttaactcgatgcattcaatgtcattgctattgataatggtgaaaagggggaaattgatgggtaagtttggtaacaaatggtttcagtgtgaatttaaattgtgcattctgtatacagcctccacatttccaaatatgtaataagccccacattgctgaacctgtaaatgccctctaattatttttatattaatgtatagctggctataaattagcttactccttgttttttaaaaggataccgtatgtaaactgaatattactaattatttgtatgtcagcagaaaatcctgaacatagaggtcttccaagctttctgtttggtcaatctatgggtggagcagttgcattgaagattcattttaagcaaccaaatgaatgggatggtgcaatactagttgcgcccatgtgcaaggtagatatatcaatgtaggaccctaactgtataagttccgtctggcagcttttttgcaaactcattttgttatagattgcagatgatgtgattccgccttggcctgttcagcaagttctaatttttatggctagacttcttccaaaagagaagcttgttccacaaaaagatttagcagagttggctttcaaagagaagaaaaaacaggagcaggtgatctgtctgccacactggcatctcaaactaatattttctatttagatttatttcatctgacatgtacattctttcatgatttttgtttcttctttgggaagaaagaactgtgaaataactgaatatgtctatttaatatatctacatgcctccacccccacaatatagggagttctaatctgttatctgtgaagtacaagtgtacagcaatgtatgaatcacatatttatcatcctacttattttatttccagttttgggtatacttatccaaaattatgaaaaatgtcattccaaagtagggactattaggaaaaagaactttttctagtgcttttaaaaatggattcaaatatatcaagtcttcttatgcctcgtgaaaagattgttaataatttgctgttgaatgcagtgttcttataatgtgattgcgtacaaggataaaccacgtctccgaacagctttggagatgctgagaaccacaaaggaaatcgagagtcgtttggaggaggtgtgtgctttaattatctgttatacttatacatatgcttttagggtcttatacaattgcttataacattgcccatcctgatattgataattgttaatattttgatatggacaaaaggcatgaaaagctgcgtttgttctgtaaacatgttggtagcatggctagtttgtgcactgtgcacagtatccatggtggaccttatacctattttgatagttcatattttttagatcattttttgacactttgttgtatctggtgcatgcatgtatagtctactatgcttttagcataaaattcagaaggttgagaggcttaataagataggcgtatggcaatggtcaacaataacttttatcctcgatagatactcatatttggtatcataatgggtttttctgttttgtggaatagttttttacaagttgcagaattgccaatggtctacttttccgatctattaccatctcagttcctttggtaactaaaagttgccccgtgtttcctatatctaggtttcgctgcccattatcattttgcatggtgagggtgatttggtcacagacccagctgtgagtaaagctctctatgataaagcgaagagctcagataagacgcttcgcctttataaagatgcatatcacgctatcttggaaggtgaaccagatgaggcaatttttcaagtcctcgatgatataatttcttggctggatcagcattctacaaagaaagttccatcgtcataaactgcaaaggcagcattgggaaaatttctttgctactgatgtatccttcgttgccgttgatccaagattccaacagttgcgattccattttggcaccagccctgtcatgtttcttttctgattgcaaatgtgcctgttgctcatcaagctgtgtacataatgtatattatccatcacaatttgtttcacaaaatttaggtaaggttttgcatgccatatataaatttgtaatatattcaaatgtttttctcgttatgtaatattttttagatttgattggcatatgtttgggttag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0135600, RefSeq:Os10g0135600