Os04g0619700

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Revision as of 11:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0619700| Description = Cyclin-like F-box domain containing protein| Version = NM_001060436.1 GI:115460601 GeneID:4337024| Length = 3116 bp|...")
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Gene Name

Os04g0619700

Description

Cyclin-like F-box domain containing protein

Version

NM_001060436.1 GI:115460601 GeneID:4337024

Length

3116 bp

Definition

Oryza sativa Japonica Group Os04g0619700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31883911..31887026

Sequence Coding Region

31884332..31886020

Expression

GEO Profiles:Os04g0619700

Genome Context

<gbrowseImage1> name=NC_008397:31883911..31887026 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31883911..31887026 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggactttgattgcaaaacagcaagaggagactcttcatctgtgaatcgttcatgcattgtcactgaaggcactgtcgtccaggcaaagcccgtttctcacaacgggaaagctaaacactggaatagcctcagtacattgaataaccagaagtgcagttatgaattactttccgacccaaagaaaaatgttgaaacaagtgatggtgagaccgcctcaaagtgtgactcatggtgcttcactgatttgccatccgcattggtctgtgaagtgcttgaacacctcgatccaaaggaacttggcattgtatcttgcgtctccaccctactgcataccctagccacagatcatcaggggtggaagaagttctactgtgaaaggtgggggattcctactcctccagtcaccctcaatgggcccttggttccaggaggaacttcagattggaagtcttggaaaacattatttgtggagcgggagtttcgaagtaaatcattcatgggaagattcagtgtggatgttctccgtgaccacagtgaggatgtacgcactgtgttccttctagcatcagtaaatctgatatttactggtggtaatgactctgtgatccgaatgtgggacttggaggaagggcttttgattgataagtcccgcccactttgttgcaccatccgggccattgcagctgacactaggcttttggtcactgcaggaaccaatgcctttattcattgttggagggctgttgaaggtaattcttaccctttccacatctctgggaatggcactgaccagagtcctgagtttcgcctttgggggcatgaaggacctgtgacttgtcttgccttggattcattgaggattttcagtggtagctgggatatgactgtccgtgtttgggacagatccgaaatgaaatgtgttcagaagttcatgcatgcagattgggtttggagcgtggcacctcatggaaatactgttgccagtacagctggtagggatgcctatgtatgggatatcaggagtggtgagttggaaaatgttatttccaatgcccattatggtaatgcattttctttagctcgaacacacctagctgatgtgctgtttaccggaggagaggatggggcaattcgcctgttcaatgtttctgaggtctctgatgatgaagatattaagccagctgctacttgggttccacataccggccctgttcattccctcgcttttgagtatccatggcttgtctcagcctctagtgatggcagggttgcactgattgatttgaggaagcttctgaccccaagaaagtcatcaaaacaaccattcagggttaagaactttgatccaagttccattgaacctccacagagaatgcttcatggctttgggtgcgatcttttttctgtcgccattggtgcagacaggattgtctgtggaggcgaggatggcgctgtcaaagtctggaacttctcagaagcactggagattgagaagagggcacaagctctaagaagtatgaggcaggagaaccgcatgaggcgaaaaaaggcacaagtagagatgaatgcaaatggtagaaggtctgaccaatgtggctcaatagccatgaaaagaaaccaactgaagggtgataagagtgtcacttggcacagcaagcgtgccatcaatgataaggtcaagtcttag</cdnaseq>

Protein Sequence

<aaseq>MDFDCKTARGDSSSVNRSCIVTEGTVVQAKPVSHNGKAKHWNSL STLNNQKCSYELLSDPKKNVETSDGETASKCDSWCFTDLPSALVCEVLEHLDPKELGI VSCVSTLLHTLATDHQGWKKFYCERWGIPTPPVTLNGPLVPGGTSDWKSWKTLFVERE FRSKSFMGRFSVDVLRDHSEDVRTVFLLASVNLIFTGGNDSVIRMWDLEEGLLIDKSR PLCCTIRAIAADTRLLVTAGTNAFIHCWRAVEGNSYPFHISGNGTDQSPEFRLWGHEG PVTCLALDSLRIFSGSWDMTVRVWDRSEMKCVQKFMHADWVWSVAPHGNTVASTAGRD AYVWDIRSGELENVISNAHYGNAFSLARTHLADVLFTGGEDGAIRLFNVSEVSDDEDI KPAATWVPHTGPVHSLAFEYPWLVSASSDGRVALIDLRKLLTPRKSSKQPFRVKNFDP SSIEPPQRMLHGFGCDLFSVAIGADRIVCGGEDGAVKVWNFSEALEIEKRAQALRSMR QENRMRRKKAQVEMNANGRRSDQCGSIAMKRNQLKGDKSVTWHSKRAINDKVKS</aaseq>

Gene Sequence

<dnaseqindica>1007..2695#gcgtgggttcccaaatcgcgaaattttcttttcccccaaaaaaccgaataaagagaaatctctccgagcgaattcgacgagatcggaggctcggatcgaggtaaattttctcctcgtatttttctttccctgatcgattgtgttgattactggatctggtaatgctctctgttcaagcatgcttgggtaggggacgtagatttgcgcgacgaatcaagtatgttatgcgcgttttttcgcgggatttttcggggttttccatgcgcgttgcgggcgacgcccagcgctgcgttggatttgacttcgaattaagggcggcacggtggtagattcctcgctcgtttagtttttgaagagttagatctcgttccctacgtttcgaatttggtcgcaggttgctaagatttcccggtttgatctgcttattaggtttactttttgtatgtatatgatcatgcaatctcagatttggtgatttgattattgtgcggtgcgaaggttctaggttgacgtgttgtggaggtttctttgatcttattggagccacccttagcttattcggcttgttttgatccgaatttactattaattttggtgcgaattcagagttcaataatccctcttccgtagcatcgactttctcatctctatgaaaaaagtttgtgggagttaatttagaatcactggtttgtttattataaatcgtccccttttctgataggcaagtttgctactgatttatatgaccatgttagtaacaagtaccaacccacctctttgtttgagttggctgtcagattctagatggaattagatctgtgattgggagttagtcttataagccttgtgccatttggctgttccaattatgtttaacatgaaaatttggacttgttcagtttcagctgaagattttgattttttttttcaggtattctccttctgatttgattggattcgggatctgctggcggggatccatctttaggtaggatttcataattttatggactttgattgcaaaacagcaagaggagactcttcatctgtgaatcgttcatgcattgtcactgaaggcactgtcgtccaggcaaagcccgtttctcacaacgggaaagctaaacactggaatagcctcagtacattgaataaccagaagtgcagttatgaattactttccgacccaaagaaaaatgttgaaacaagtgatggtgagaccgcctcaaagtgtgactcatggtgcttcactgatttgccatccgcattggtctgtgaagtgcttgaacacctcgatccaaaggaacttggcattgtatcttgcgtctccaccctactgcataccctagccacagatcatcaggggtggaagaagttctactgtgaaaggtgggggattcctactcctccagtcaccctcaatgggcccttggttccaggaggaacttcagattggaagtcttggaaaacattatttgtggagcgggagtttcgaagtaaatcattcatgggaagattcagtgtggatgttctccgtgaccacagtgaggatgtacgcactgtgttccttctagcatcagtaaatctgatatttactggtggtaatgactctgtgatccgaatgtgggacttggaggaagggcttttgattgataagtcccgcccactttgttgcaccatccgggccattgcagctgacactaggcttttggtcactgcaggaaccaatgcctttattcattgttggagggctgttgaaggtaattcttaccctttccacatctctgggaatggcactgaccagagtcctgagtttcgcctttgggggcatgaaggacctgtgacttgtcttgccttggattcattgaggattttcagtggtagctgggatatgactgtccgtgtttgggacagatccgaaatgaaatgtgttcagaagttcatgcatgcagattgggtttggagcgtggcacctcatggaaatactgttgccagtacagctggtagggatgcctatgtatgggatatcaggagtggtgagttggaaaatgttatttccaatgcccattatggtaatgcattttctttagctcgaacacacctagctgatgtgctgtttaccggaggagaggatggggcaattcgcctgttcaatgtttctgaggtctctgatgatgaagatattaagccagctgctacttgggttccacataccggccctgttcattccctcgcttttgagtatccatggcttgtctcagcctctagtgatggcagggttgcactgattgatttgaggaagcttctgaccccaagaaagtcatcaaaacaaccattcagggttaagaactttgatccaagttccattgaacctccacagagaatgcttcatggctttgggtgcgatcttttttctgtcgccattggtgcagacaggattgtctgtggaggcgaggatggcgctgtcaaagtctggaacttctcagaagcactggagattgagaagagggcacaagctctaagaagtatgaggcaggagaaccgcatgaggcgaaaaaaggcacaagtagagatgaatgcaaatggtagaaggtctgaccaatgtggctcaatagccatgaaaagaaaccaactgaagggtgataagagtgtcacttggcacagcaagcgtgccatcaatgataaggtcaagtcttagattaggatttgtacccttcacaactttacactctacagtagccatgagttgatagttcttttcttggaagtacctttgctgatcccaattaggcttgctgtgtaggttaacattggcattttcactattgaattttataaggttaccaatgcagtgtagccatgcatgaaatccgcatatgcaattcttattcgatatggcatatattgatctaacagaagctctcattgtcttactgttttgagctctagttgcatttgggttttgttcgtatctttctgctggtagctgttatgaatgggaatctacattgaactattccaggaataataagcttctgtaattatgtcactgctggattcttagaacattacttttgctgttacgtggtctgcaataagaaaatcctgcattccgactc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0619700, RefSeq:Os04g0619700