Os04g0621500

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Revision as of 11:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0621500| Description = Disease resistance protein family protein| Version = NM_001187167.1 GI:297723464 GeneID:9269204| Length = 5991 bp| ...")
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Gene Name

Os04g0621500

Description

Disease resistance protein family protein

Version

NM_001187167.1 GI:297723464 GeneID:9269204

Length

5991 bp

Definition

Oryza sativa Japonica Group Os04g0621500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31976423..31982413

Sequence Coding Region

31976423..31976732,31976854..31978677,31978717..31979461,31979666..31981454,31981755..31981782
,31981962..31982413

Expression

GEO Profiles:Os04g0621500

Genome Context

<gbrowseImage1> name=NC_008397:31976423..31982413 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31976423..31982413 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggtggagtggagcgtggtggacgcggcgatagggtggctggtgcagagcgtcctggggaccctcctcgccggcaagctggaggcctggacgcgcgaggtcgggctcgccggcgacgtgcggaggctcgaggtcgggatgaggagcgtcgagatggtgctcgccgcggcggccgcccgggggagggagctcgtcgggaacgagccgctgtcccgctccctcgacgacctgaggcagctgctgttcgacgccgaggacgtcgtcgacgagctcgactactaccgcctccagctagagatcgagcagcgcgaggacgctgctgctgctgtggattcttgtgttgagggaggcaatgcatcttccttcagctccacctcgtcttctacttgccgtcttgtatggaatgctgccactaagcttacttcttgggcatcaatggcagtagatttcgtcatggcccatgccggaagcaaaaggaaaaggggacaatatgagctagcacaagatgatgccactgttgtggttgtgccgttcgaaaacaaggatgatatctctcgcaggataaacgagatagcaacctcgctgtgcacaattagtgattctgtgcacaaggctatccatttagaggcctcttactgcattgcggtaccaaaagaaggcgtggtcagcaacagacgactgacaacttcggtgccagttgaacagaaggtgtatgggagggatagtgacagagacatgatagtggagcttctggtaaatgggaaatccagggacctgaatgttctgccaatagttggaaatggaggggtcggaaagaccactcttgctaaatttgtataccgtgatcgaagaatcaaagatcattttgatttgcaaatgtgggtttgcgtatcttccatcttcgatgaggtgagactaacacgcgagatgctagagcatgcctgtagagacaggcaggattgtgagaaaataagcagctttaatgtgcttcaggagatgctcatgggcagcgttagaaacagaagatttctgctcatcttagatgatgtgtgggaagacaaggataaaaacggttggaatagactactaggtccattgcgccagaatcaaacagtcggatgcatgattctagcaacaactcggagcccctctgttgccaaaaagatcagaacactgacctcagttgaattgaaaggtttggatgacgacaacttttggttgttcttcaagcaatgcgcatttggtgatgagaaccacggggatcatcctagtttgcaagtcattggacaacaaattgtgaaaacactgaagggttacccactagctgcccaaagtgttggtgcacttttgggacagaatcttaactatgagcactggtggaaaatccgggaccaatgggcatctctacagaaaggtgatgatgatattttacctatcttaaagcttagttatgattatctaccatcttgcttgcaacgctgtttctcttactgctcattgtttccacaagagcataaatttgatggggaaaagttgatttttgcatggatttcacaaagctttgtgtcttgcaaagatacaaaaaatagagtggagcaaacagggagggagtacctggacaaattggtggatttgggcttcttccagaaagatggcccgcactatgtcatgcatggtttaatgcatgaactagcacaggcagtttcatctaatgactgtgccactattgatggtttgaagtccaattcgattccttcaactattcgtcatctttcaatcattacctctgcttatgatgaagttgagcatgacagttttcccacagataagtttgagagacaattggagaaaattacatgtttaaaaaaactgaggaccttgatgttctttggtcatggaccctacgggagcagaaatttgttgaaatgtttactaacattatgcaaacatgcaaaaggtctgcgttacctaagagtacactttgcatttatgttaattgatgctctctggaactccataaagcctttccatctccgatatattgaattttttaatggaagtatcactttcgaaaaatcttgttggtgggaaacagaagatggacctcgtatctacaacgtcgatcctcaaggttcttccagcaatcttgtacctaggcgcataaataatctggtcaacctacggcatcttattgctgataaggaaaggcactcggaaattgctaatgttgggaggttaacgtctcttcaggaactaagaaaatttagagttgaaaatgttgatggttttgaaatcggacaacttcagcaaatgaatgagctcgtaagtcttggaatttttcaacttgggaatgtcaagactaaagaagaggccaggagagcaagactgatagacaaggactacctagaaaatttgtgcttggtatgggatgatagtaccacaaatttgaaacctgctatggcaacagcagaggaggtcttagaaggtcttcatccaaatagaaatgtaaagcgtatcaaaatccggggctacaatggtgctatctgccccatgtggcttgggagtaatgtttctgtccctttacttcgatcccttcacttaaagaattgtagtgaatggagagcaattcaacttgaagagatttcttcacttggcaagctgaatttgatccggatgtggagtttagtggatgtctcaattccttctttggatgaattagtgctaattgatttgccaaacttggaaaaatgtattggtacatataatagggaattgacttctaacatgagaattctgaggatggagagatgtgacaagctgaaggactttactcttttcctgaactatgatcatttcagagttgagcggaagacatggcaatggactatccttccatttgaagagatgcattctcttaaggacttaaagttgattgcgatgcctggtgttagagaagtttcagttccttacctgaagaagttggtcataagaaacatgccaaacctagaatgttgcacatgtgcgaacctcgacctattatcttcctgtctagaagtactgaaaattacaaaatgcagaaaattgaccagttttcaagtcttgcaagttttaccaccccactgtgaggagaagacatggcttccaaacatgaataaactcaaagtgcacagttgtcctcattttatagtatcatgcccttttccaccttctgcagaattgtccaaggtatctgtatccatccgaggagttttggctcctcctgcaatagaaatgcgtaagcattggccactctttacaatcaagtcttatgagtggagtgtcttgaatgatgataccgtggcattcaacaacttgacaagtatactaaacttccgcatcataaattgccccaatctggtctctgtttcgtttgaagcgttaagtcagctcatgtctttacagagcttggaaatcgttgactgccccaggttgctttggccacagatgatgctggaagaagcatgtgaaggaaagacaaagtttccatctatcacacatctatcaattgtgtcatctagtatgctgggtgatccattattgcttccatgtacacagtctgaacagctgactgtaaatgacaaaccttcaacattcagttgtcctgtagaagagcaaagcaaccatctgtctttactatatatctcctcaactactactacagcaacaacagagtcgataagaaacggacccatactatttcatatgccacatcttctctacacatatgtcaaaaagttgcacatatctgactgcccaaatttggttttttgcagcagaaaggttggttttgcgggattcacctcccttgaggagttgacagttaccagatgccccaaattactcatgcccatggtgcatgaaggtgttagtgatgatcatataggtgggaggtttctccttccaccattactcaaccaatttgagaccgatcatctctcagaaaagctccagctctattttccagagaaccatacctctctcagaagattgtcagtgtgggacagccctagcctgatatgcctacagctgcattcttgtacaaagttggaggagttggaaatctttaactgtaagaacttgtgtacacttgggggattgacatttctcagctccctaaagatcatgaagcttgcaaggaatcccaagctgtccacttcatgggaatttgactcacaggatcaacaatgcacgggagatcaggctggagatctaagcattttatctggactggaatggcttgagactgatgacttctctgtccttaccatgtccttcttcaaacacctcaactccctccaacacttgacgctttcaagctcgcgaagttattggagagtggtgagactgtcagaggggcaagggagagtgcttcagcagctcacccacctccaggagctcagattcctctgctgcgatgatctcctcgtgctgcctgaacagttgcattgcctgtcctccctcaagaagttggagattggctactgtccgggtatcttacgtttgccggaagagggactccctcttttatcacttgaagaattggaaaccagaggctgcactgaggaactaaataggcagtgcagactagcagcgacagaaaagctaaaggtcctaattgatgggaaaccgcggctgtctgtcattgcttgtgcaatcgcactcaaccgctgctggacggcggacaggttaagcatcaggggcttgcttcaccccagcatgtgtgtcttatgcgatcagcacgaagaaagcatcgatcacattttggtcgcatgcccagaatcaaggcagctctggtggctactgctctcggccatcagtcgcccggaatgcttgcccgtcaatgaaatctcattccattcctggttgtgtgacaagagggaaaccttcccaagctctcaacggcgaggtttcgataccattgctacactcgcagcatggacaatttggaaggaatggaataacagggtgttcaatcagaagcagagaagctggacagaagtggcaagggcaatggcagaagaggcagcgctgtggcggctcaccaatactgccatgccggccatgcctttaggccgcttaggtcgcaacattgtgtcgcgagaatag</cdnaseq>

Protein Sequence

<aaseq>MGVEWSVVDAAIGWLVQSVLGTLLAGKLEAWTREVGLAGDVRRL EVGMRSVEMVLAAAAARGRELVGNEPLSRSLDDLRQLLFDAEDVVDELDYYRLQLEIE QREDAAAAVDSCVEGGNASSFSSTSSSTCRLVWNAATKLTSWASMAVDFVMAHAGSKR KRGQYELAQDDATVVVVPFENKDDISRRINEIATSLCTISDSVHKAIHLEASYCIAVP KEGVVSNRRLTTSVPVEQKVYGRDSDRDMIVELLVNGKSRDLNVLPIVGNGGVGKTTL AKFVYRDRRIKDHFDLQMWVCVSSIFDEVRLTREMLEHACRDRQDCEKISSFNVLQEM LMGSVRNRRFLLILDDVWEDKDKNGWNRLLGPLRQNQTVGCMILATTRSPSVAKKIRT LTSVELKGLDDDNFWLFFKQCAFGDENHGDHPSLQVIGQQIVKTLKGYPLAAQSVGAL LGQNLNYEHWWKIRDQWASLQKGDDDILPILKLSYDYLPSCLQRCFSYCSLFPQEHKF DGEKLIFAWISQSFVSCKDTKNRVEQTGREYLDKLVDLGFFQKDGPHYVMHGLMHELA QAVSSNDCATIDGLKSNSIPSTIRHLSIITSAYDEVEHDSFPTDKFERQLEKITCLKK LRTLMFFGHGPYGSRNLLKCLLTLCKHAKGLRYLRVHFAFMLIDALWNSIKPFHLRYI EFFNGSITFEKSCWWETEDGPRIYNVDPQGSSSNLVPRRINNLVNLRHLIADKERHSE IANVGRLTSLQELRKFRVENVDGFEIGQLQQMNELVSLGIFQLGNVKTKEEARRARLI DKDYLENLCLVWDDSTTNLKPAMATAEEVLEGLHPNRNVKRIKIRGYNGAICPMWLGS NVSVPLLRSLHLKNCSEWRAIQLEEISSLGKLNLIRMWSLVDVSIPSLDELVLIDLPN LEKCIGTYNRELTSNMRILRMERCDKLKDFTLFLNYDHFRVERKTWQWTILPFEEMHS LKDLKLIAMPGVREVSVPYLKKLVIRNMPNLECCTCANLDLLSSCLEVLKITKCRKLT SFQVLQVLPPHCEEKTWLPNMNKLKVHSCPHFIVSCPFPPSAELSKVSVSIRGVLAPP AIEMRKHWPLFTIKSYEWSVLNDDTVAFNNLTSILNFRIINCPNLVSVSFEALSQLMS LQSLEIVDCPRLLWPQMMLEEACEGKTKFPSITHLSIVSSSMLGDPLLLPCTQSEQLT VNDKPSTFSCPVEEQSNHLSLLYISSTTTTATTESIRNGPILFHMPHLLYTYVKKLHI SDCPNLVFCSRKVGFAGFTSLEELTVTRCPKLLMPMVHEGVSDDHIGGRFLLPPLLNQ FETDHLSEKLQLYFPENHTSLRRLSVWDSPSLICLQLHSCTKLEELEIFNCKNLCTLG GLTFLSSLKIMKLARNPKLSTSWEFDSQDQQCTGDQAGDLSILSGLEWLETDDFSVLT MSFFKHLNSLQHLTLSSSRSYWRVVRLSEGQGRVLQQLTHLQELRFLCCDDLLVLPEQ LHCLSSLKKLEIGYCPGILRLPEEGLPLLSLEELETRGCTEELNRQCRLAATEKLKVL IDGKPRLSVIACAIALNRCWTADRLSIRGLLHPSMCVLCDQHEESIDHILVACPESRQ LWWLLLSAISRPECLPVNEISFHSWLCDKRETFPSSQRRGFDTIATLAAWTIWKEWNN RVFNQKQRSWTEVARAMAEEAALWRLTNTAMPAMPLGRLGRNIVSRE</aaseq>

Gene Sequence

<dnaseqindica>1..310#432..2255#2295..3039#3244..5032#5333..5360#5540..5991#atgggggtggagtggagcgtggtggacgcggcgatagggtggctggtgcagagcgtcctggggaccctcctcgccggcaagctggaggcctggacgcgcgaggtcgggctcgccggcgacgtgcggaggctcgaggtcgggatgaggagcgtcgagatggtgctcgccgcggcggccgcccgggggagggagctcgtcgggaacgagccgctgtcccgctccctcgacgacctgaggcagctgctgttcgacgccgaggacgtcgtcgacgagctcgactactaccgcctccagctagagatcgagcagcgtacgttctttcccccccaaatttccatcccaaaatcccaatttctgttccttcctgtttccttgcactgtttcactcacaaatttcactccccgtctgttggttttaatggtttctacaggcgaggacgctgctgctgctgtggattcttgtgttgagggaggcaatgcatcttccttcagctccacctcgtcttctacttgccgtcttgtatggaatgctgccactaagcttacttcttgggcatcaatggcagtagatttcgtcatggcccatgccggaagcaaaaggaaaaggggacaatatgagctagcacaagatgatgccactgttgtggttgtgccgttcgaaaacaaggatgatatctctcgcaggataaacgagatagcaacctcgctgtgcacaattagtgattctgtgcacaaggctatccatttagaggcctcttactgcattgcggtaccaaaagaaggcgtggtcagcaacagacgactgacaacttcggtgccagttgaacagaaggtgtatgggagggatagtgacagagacatgatagtggagcttctggtaaatgggaaatccagggacctgaatgttctgccaatagttggaaatggaggggtcggaaagaccactcttgctaaatttgtataccgtgatcgaagaatcaaagatcattttgatttgcaaatgtgggtttgcgtatcttccatcttcgatgaggtgagactaacacgcgagatgctagagcatgcctgtagagacaggcaggattgtgagaaaataagcagctttaatgtgcttcaggagatgctcatgggcagcgttagaaacagaagatttctgctcatcttagatgatgtgtgggaagacaaggataaaaacggttggaatagactactaggtccattgcgccagaatcaaacagtcggatgcatgattctagcaacaactcggagcccctctgttgccaaaaagatcagaacactgacctcagttgaattgaaaggtttggatgacgacaacttttggttgttcttcaagcaatgcgcatttggtgatgagaaccacggggatcatcctagtttgcaagtcattggacaacaaattgtgaaaacactgaagggttacccactagctgcccaaagtgttggtgcacttttgggacagaatcttaactatgagcactggtggaaaatccgggaccaatgggcatctctacagaaaggtgatgatgatattttacctatcttaaagcttagttatgattatctaccatcttgcttgcaacgctgtttctcttactgctcattgtttccacaagagcataaatttgatggggaaaagttgatttttgcatggatttcacaaagctttgtgtcttgcaaagatacaaaaaatagagtggagcaaacagggagggagtacctggacaaattggtggatttgggcttcttccagaaagatggcccgcactatgtcatgcatggtttaatgcatgaactagcacaggcagtttcatctaatgactgtgccactattgatggtttgaagtccaattcgattccttcaactattcgtcatctttcaatcattacctctgcttatgatgaagttgagcatgacagttttcccacagataagtttgagagacaattggagaaaattacatgtttaaaaaaactgaggaccttgatgttctttggtcatggaccctacgggagcagaaatttgttgaaatgtttactaacattatgcaaacatgcaaaaggtctgcgttacctaagagtacactttgcatttatgttaattgatgctctctggaactccataaagcctttccatctccgatatattgaattttttaatggaagtatcactttcgaaaaatcttgttggtgggaaacagaagatggacctcgtatctacaacgtcgatcctcaaggtttgccgacatgttatcaccttcaagcattggatgcaggttcttccagcaatcttgtacctaggcgcataaataatctggtcaacctacggcatcttattgctgataaggaaaggcactcggaaattgctaatgttgggaggttaacgtctcttcaggaactaagaaaatttagagttgaaaatgttgatggttttgaaatcggacaacttcagcaaatgaatgagctcgtaagtcttggaatttttcaacttgggaatgtcaagactaaagaagaggccaggagagcaagactgatagacaaggactacctagaaaatttgtgcttggtatgggatgatagtaccacaaatttgaaacctgctatggcaacagcagaggaggtcttagaaggtcttcatccaaatagaaatgtaaagcgtatcaaaatccggggctacaatggtgctatctgccccatgtggcttgggagtaatgtttctgtccctttacttcgatcccttcacttaaagaattgtagtgaatggagagcaattcaacttgaagagatttcttcacttggcaagctgaatttgatccggatgtggagtttagtggatgtctcaattccttctttggatgaattagtgctaattgatttgccaaacttggaaaaatgtattggtacatataatagggaattgacttctaacatgagaattctgaggatggagagatgtgacaagctgaaggactttactcttttcctgaactatgatcatttcagagttgagcggaagacatggttcccattactgacaaaactcaccatcaagcaatgccctcagataatgttgttatttcttccttttgacacatgaattatccgatctcttttcggtttgcaaatgatagtgattttttacttaatcatttaatgaagaggtcatttttttagccatatctttctgaactgaaaaccttactgaattagattgttgaattgcaggcaatggactatccttccatttgaagagatgcattctcttaaggacttaaagttgattgcgatgcctggtgttagagaagtttcagttccttacctgaagaagttggtcataagaaacatgccaaacctagaatgttgcacatgtgcgaacctcgacctattatcttcctgtctagaagtactgaaaattacaaaatgcagaaaattgaccagttttcaagtcttgcaagttttaccaccccactgtgaggagaagacatggcttccaaacatgaataaactcaaagtgcacagttgtcctcattttatagtatcatgcccttttccaccttctgcagaattgtccaaggtatctgtatccatccgaggagttttggctcctcctgcaatagaaatgcgtaagcattggccactctttacaatcaagtcttatgagtggagtgtcttgaatgatgataccgtggcattcaacaacttgacaagtatactaaacttccgcatcataaattgccccaatctggtctctgtttcgtttgaagcgttaagtcagctcatgtctttacagagcttggaaatcgttgactgccccaggttgctttggccacagatgatgctggaagaagcatgtgaaggaaagacaaagtttccatctatcacacatctatcaattgtgtcatctagtatgctgggtgatccattattgcttccatgtacacagtctgaacagctgactgtaaatgacaaaccttcaacattcagttgtcctgtagaagagcaaagcaaccatctgtctttactatatatctcctcaactactactacagcaacaacagagtcgataagaaacggacccatactatttcatatgccacatcttctctacacatatgtcaaaaagttgcacatatctgactgcccaaatttggttttttgcagcagaaaggttggttttgcgggattcacctcccttgaggagttgacagttaccagatgccccaaattactcatgcccatggtgcatgaaggtgttagtgatgatcatataggtgggaggtttctccttccaccattactcaaccaatttgagaccgatcatctctcagaaaagctccagctctattttccagagaaccatacctctctcagaagattgtcagtgtgggacagccctagcctgatatgcctacagctgcattcttgtacaaagttggaggagttggaaatctttaactgtaagaacttgtgtacacttgggggattgacatttctcagctccctaaagatcatgaagcttgcaaggaatcccaagctgtccacttcatgggaatttgactcacaggatcaacaatgcacgggagatcaggctggagatctaagcattttatctggactggaatggcttgagactgatgacttctctgtccttaccatgtccttcttcaaacacctcaactccctccaacacttgacgctttcaagctcgcgaagttattggagagtggtgagactgtcagaggggcaagggagagtgcttcagcagctcacccacctccaggagctcagattcctctgctgcgatgatctcctcgtgctgcctgaacagttgcattgcctgtcctccctcaagaagttggagattggctactgtccgggtatcttacgtttgccggaagagggactccctcttttatcacttgaagaattggaaaccagaggctgcactgaggaactaaataggcagtgcagactagcagcgacagaaaagctaaaggtcctaattgatgggaaagtgtgtagggtctgatagaagcttgaagacctcgcctctctatttgttgtatgctccgcaaatgggctagtactgagctgcttatgaggtactagtataatctaaaatttacaatattccatagttaactgaaatattcagttttctcttgctaaagtaaaacttataagagtttttgtactgcactgcaggccaagatgttatttatgcagttgaggaccatcattcgcctaaaattccagcaaacattcttgtgatgagttgatgatagtagcttattgaatctaatatgattcctagccgcggctgtctgtcattgcttgtgcaagtaagttttgtggccgcagtttactgccttttgttctgaagtttctgcagcgcttcatactgggtacttttgaagactaatacacgcagtgtaatttggtgtgagtttgtgtctgcactctgcagtgtggatttgttgctgtttactattggtagtattctctggtttcatttggctagtcgcactcaaccgctgctggacggcggacaggttaagcatcaggggcttgcttcaccccagcatgtgtgtcttatgcgatcagcacgaagaaagcatcgatcacattttggtcgcatgcccagaatcaaggcagctctggtggctactgctctcggccatcagtcgcccggaatgcttgcccgtcaatgaaatctcattccattcctggttgtgtgacaagagggaaaccttcccaagctctcaacggcgaggtttcgataccattgctacactcgcagcatggacaatttggaaggaatggaataacagggtgttcaatcagaagcagagaagctggacagaagtggcaagggcaatggcagaagaggcagcgctgtggcggctcaccaatactgccatgccggccatgcctttaggccgcttaggtcgcaacattgtgtcgcgagaatag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0621500, RefSeq:Os04g0621500