Os04g0623100

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Revision as of 11:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0623100| Description = Bromodomain containing protein| Version = NM_001060456.1 GI:115460641 GeneID:4337044| Length = 2056 bp| Definition ...")
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Gene Name

Os04g0623100

Description

Bromodomain containing protein

Version

NM_001060456.1 GI:115460641 GeneID:4337044

Length

2056 bp

Definition

Oryza sativa Japonica Group Os04g0623100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32061894..32063949

Sequence Coding Region

32062326..32062384,32062482..32062632,32062719..32063879

Expression

GEO Profiles:Os04g0623100

Genome Context

<gbrowseImage1> name=NC_008397:32061894..32063949 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32061894..32063949 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctccgccctgctcgccggccggggcggggttaaccaccaccaccaccaccaccagtggggggagacccgtgccccgctcgcgcccgtggcccccaattccgatcccaaccaccctctccagcagcgcgccaacggctcggccacgaggccgccgccgtcaagctacgtggcgctgcggccgggggcaatggctcaccgcgaggcccgcgcgctgcgggaccgcctcgccggcgagcttggccaggtccgcgccctcatcgcccggatcgacacgtggcagcagggtcaggtgaagcgccatggctcgcctcgccgggacctccccacgccgccggcgaagctcagggcggcgatgcggaagcgttgcgagcagatcctggcgaagctgcggaaggacaagcggagcatctggttcaacgcccccgtcgaggtcgaccgcctcgggctccacgactaccacgcagtcatcaagtgccccatggatctcggcacggtgagggcgaacctcgccgccggaaggtacccctcacacgacgacttcgccgccgacgtccggctcacgttcagcaacgcgctgagatacaaccctgcggggcacgaggtccacaccttcgccggcgacctcctggcgtcctttgagaagatgtacaaggcatctatgtcttggttcgagcaggaactcaagctccttgagccgccgatgccagtgccgccaccggaattgccaccggcgacagctccggtgcaggtgaaaccaagggcagcgaatgtgaaaatgcggaagccgaaggcaagggagccgaacaagagggatatgacgctggaggagaagaacttgttgagggttgggttggagagcttgccagaggagaagatgcataatgtgctgcagattgtgcggaagaggaatggcaatcctgagctggttgggggtgagatcgagctggatattgatgagatggatgtcgagacacagtgggagcttgatcgattcgtcaacaacttcaagaaggcgctcaacaagagtcgacgggctgccattgttaatggtgaaaatgccgatgtcattgatgcttccgtggctaatgatagtgatatgctggtgaatggcagtaccgctacgatggtggacaacggtgatgtgacaatggcaatagagagcaaggatcctgacaagatcactacacaggccgagcagttggatgagtatgtagatatcggggatgaaatgccaacagcaacttaccaatcagtggagattgagaaggatactgaggccgcgagcagtgggtcctcatcatccagtgattcagggagctcaaaggacagtgtctcagaatctggcaatgcccattctctggtgtaa</cdnaseq>

Protein Sequence

<aaseq>MASALLAGRGGVNHHHHHHQWGETRAPLAPVAPNSDPNHPLQQR ANGSATRPPPSSYVALRPGAMAHREARALRDRLAGELGQVRALIARIDTWQQGQVKRH GSPRRDLPTPPAKLRAAMRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKC PMDLGTVRANLAAGRYPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMY KASMSWFEQELKLLEPPMPVPPPELPPATAPVQVKPRAANVKMRKPKAREPNKRDMTL EEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFV NNFKKALNKSRRAAIVNGENADVIDASVANDSDMLVNGSTATMVDNGDVTMAIESKDP DKITTQAEQLDEYVDIGDEMPTATYQSVEIEKDTEAASSGSSSSSDSGSSKDSVSESG NAHSLV</aaseq>

Gene Sequence

<dnaseqindica>1566..1624#1318..1468#71..1231#gcggatccacccactctcgccagcgcagcagcagcagcacgcgaaaccctcgccggcgacggcgacggtgatggcctccgccctgctcgccggccggggcggggttaaccaccaccaccaccaccaccagtggggggagacccgtgccccgctcgcgcccgtggcccccaattccgatcccaaccaccctctccagcagcgcgccaacggctcggccacgaggccgccgccgtcaagctacgtggcgctgcggccgggggcaatggctcaccgcgaggcccgcgcgctgcgggaccgcctcgccggcgagcttggccaggtccgcgccctcatcgcccggatcgacacgtggcagcagggtcaggtgaagcgccatggctcgcctcgccgggacctccccacgccgccggcgaagctcagggcggcgatgcggaagcgttgcgagcagatcctggcgaagctgcggaaggacaagcggagcatctggttcaacgcccccgtcgaggtcgaccgcctcgggctccacgactaccacgcagtcatcaagtgccccatggatctcggcacggtgagggcgaacctcgccgccggaaggtacccctcacacgacgacttcgccgccgacgtccggctcacgttcagcaacgcgctgagatacaaccctgcggggcacgaggtccacaccttcgccggcgacctcctggcgtcctttgagaagatgtacaaggcatctatgtcttggttcgagcaggaactcaagctccttgagccgccgatgccagtgccgccaccggaattgccaccggcgacagctccggtgcaggtgaaaccaagggcagcgaatgtgaaaatgcggaagccgaaggcaagggagccgaacaagagggatatgacgctggaggagaagaacttgttgagggttgggttggagagcttgccagaggagaagatgcataatgtgctgcagattgtgcggaagaggaatggcaatcctgagctggttgggggtgagatcgagctggatattgatgagatggatgtcgagacacagtgggagcttgatcgattcgtcaacaacttcaagaaggcgctcaacaagagtcgacgggctgccattgttaatggtgaaaatgccgatgtcattgatgcttccgtggctaatgatagtgatatgctggtgaatggcagtaccgctacgatggtggacaacggtgatgtgacaatggcaatagtgagcagcatgctttgttcttggttgctattagcttatgtgtgagatgagctcttataatggttaatgtgttttgttgtttacaggagagcaaggatcctgacaagatcactacacaggccgagcagttggatgagtatgtagatatcggggatgaaatgccaacagcaacttaccaatcagtggagattgagaaggatactgaggccgcgagcagtgggtcctcatcatccagtggtacgatcgaactgtcactttataatttgaacatccaacttcttgatgaacggaaggttttgggttgtgtcttatttgatttttgttactggttcagattcagggagctcaaaggacagtgtctcagaatctggcaatgcccattctctggtgtaaggcctccattctaacagtaggatacgagtaggtggatgattaatttccttttgtgtgattggtggtgtagagacaccaaaagtgtaggtgttttgtaagttgattaagaggagttggtatctgtttggatttagtcaagattaatttgtagcgagtgaactggctttgtggctattctgatagcgcaggtgtcctatgtacatataagtgaaaaatggagactacggtagcaattggtagactggtagttcaccaggctttctgatctgaagaagtgaatatggttcatgtggctgtctgttcttctagttctcaatgcagttgttttgttacaactgtcatatactcttaatactcttacgtaatttgatgtgtcattatgggtgattgtaactgtggcaattgaagtagcaacatataatcttttctggg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0623100, RefSeq:Os04g0623100