Os04g0623300

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Revision as of 11:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0623300| Description = Similar to Flavin-containing monamine oxidase family protein| Version = NM_001060458.1 GI:115460645 GeneID:4337046| ...")
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Gene Name

Os04g0623300

Description

Similar to Flavin-containing monamine oxidase family protein

Version

NM_001060458.1 GI:115460645 GeneID:4337046

Length

5343 bp

Definition

Oryza sativa Japonica Group Os04g0623300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32067792..32073134

Sequence Coding Region

32068131..32068451,32068541..32068970,32069073..32069170,32069280..32069382,32069468..32069553
,32069641..32069728,32069813..32069926,32070031..32070119,32070241..32070353
,32072265..32072277

Expression

GEO Profiles:Os04g0623300

Genome Context

<gbrowseImage1> name=NC_008397:32067792..32073134 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32067792..32073134 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaacaacagttcatatggtgaaaatgttaggagaaagtcccacacaccttctgctattgttatcggcagtgggtttgcaggcattgctgcagccaacgctctcaggaatgcatcatttgaggttgttcttctagaatctcgtgacaggataggtggtagaattcacactgattactcttttggctttcctgttgatctgggagcatcctggcttcatggtgtttgtgaggaaaatcccctggcaccaattattggaaggcttggacttccactgtatcgcacaagtggagatgactctgtgctgtttgatcatgaccttgagagttatgctctctatgacactaagggccatcaagttccccaagagctggtagaaaagatagggaaggtttttgagactatattggaagagactggcaaactgagggaagaaactaaggaagacatttctattgcgaaggccattgcaattgttatggagagaaatccacacttgaggcaagaagggattgctcatgatgttcttcagtggtatttgtgccgcatggaaggttggtttgctactgatgcggacgcaatctctcttcagggttgggaccaggaggtactgcttcctggtggccatggtctcatggttcgtggatatcgtccagtaataaatactctggcaaaaggcctagatatacgccttggccacagggttgttgagattgttcgccacaggaatagggtggaggttactgtaagcagtggtaaaacatttgttgcggatgctgcagtcattgctgtccccttaggtgttcttaaagcaaacaccattaaatttgaacctaggctgccagagtggaaggaggaagcaataagagaactctcagttggagtcgagaacaaaataattctccacttcagcgaggttttctggcctaatgtggagttccttggagtagtttcatccaccacatatggctgcagctatttcctcaacctccacaaggctactggccatcctgttctagtttacatgcctgcgggtcggcttgcatgtgacattgaaaagctgtcagatgaggctgctgcccaatttgccttctctcagctgaagaagatcctgcccaacgctgccgagccgatacattacctagtgtcacattggggctcagacgagaatacacttggatcctacaccttcgatggggtgggcaaacctcgtgacctgtatgagaagctgcggatcccagtcgataacctattctttgctggagaagccaccagtgtccagtacactggcacggtgcatggcgccttctccactggtctgatggcagctgaggagtgccgaatgagggttcttgagcggttcagggagctggacatgctggagatgtgccaccctgcaatgggggagcagaccgccactgtctcagtcccactgctcatctcccggctgtga</cdnaseq>

Protein Sequence

<aaseq>MANNSSYGENVRRKSHTPSAIVIGSGFAGIAAANALRNASFEVV LLESRDRIGGRIHTDYSFGFPVDLGASWLHGVCEENPLAPIIGRLGLPLYRTSGDDSV LFDHDLESYALYDTKGHQVPQELVEKIGKVFETILEETGKLREETKEDISIAKAIAIV MERNPHLRQEGIAHDVLQWYLCRMEGWFATDADAISLQGWDQEVLLPGGHGLMVRGYR PVINTLAKGLDIRLGHRVVEIVRHRNRVEVTVSSGKTFVADAAVIAVPLGVLKANTIK FEPRLPEWKEEAIRELSVGVENKIILHFSEVFWPNVEFLGVVSSTTYGCSYFLNLHKA TGHPVLVYMPAGRLACDIEKLSDEAAAQFAFSQLKKILPNAAEPIHYLVSHWGSDENT LGSYTFDGVGKPRDLYEKLRIPVDNLFFAGEATSVQYTGTVHGAFSTGLMAAEECRMR VLERFRELDMLEMCHPAMGEQTATVSVPLLISRL</aaseq>

Gene Sequence

<dnaseqindica>4684..5004#4165..4594#3965..4062#3753..3855#3582..3667#3407..3494#3209..3322#3016..3104#2782..2894#858..870#aggatcccgtcacctccaaaagcccaaaaagctcccgaaacgccaggaaagcggaaggtctcgttctcctcctctccccaaaaccaaatccccctctccgaaaatctccaaaaatccagcgaaaaccatccgatccatcgatcgatcgatcgccgcaagactgcttcgggtttttttttgctcttgctccgatcgactgcgtgcgcctcgaatcgaaatctcgaggtgggtgtgtggcgcgatttcgtatagcttgcgtgcgatttttggactgggtttgcgaggggaaagatagggagccctaggtttgttgattgccttggctcgattcgatcgcttctggtgtgggattcggagattggcttcctgatgacttagggggttgatttttggtctagttttaatcatcggctttcttgaatcgcttaaatctctcgattttgcggcggatttcgtgtgctgggaagcggtttttgtgtgactaaaactgaaggtttataaatttgggtgaataataaacggttggtttcctttgattttttcgcagtgatatcacgcgggagttgatccagacttaaaccggattgcctgagaagttgatgggatcgcgcgaattctcggcgctgacgtgagatcgtgaaagggttggacatcaaattgctaggaggttgcggcgatttggctgcacgactgcatgaactgtttcgtgaacctgggactcaactcgaactcgaaccactacgtggcctgcctcatcatcttcctgctgcatttctccccgcagtttctgttaaatccatccaattgtaattcgaattcgagtagtaatcgtgaaggagagaaacagaaccccaacaatggcgaacaacagtaagttcctggcttcgtttggcagattttctcatccattgtttttgtggtgattctgttgctgatttttatgttattttgtttattccattataaagtccccctctcagttcaagactttttttttttgcatctgttaatgtaaagttaggtggaaaatcgaatttagaagaaactgttttataaagtttgctgatgtatgctaatacctctgctagtagtagaatatcgaacatgtattgttttagggatttgtgcacttaatgcaaccttagtgcaaaaaccgaaattttccactctctaggtggttgtagtgataaaattgctttgataatctaaacacactgagttgcttatggttgttgggaggtgcctagtgggccagatgaaagagacatcagccatcgtggatgagttcccatattcctctgtcggtggtaggaagagaaaacaaaacattagctgtttacacctgttgtaccagcgcctcaaccaattggaaccttctagggtttttctcatggcgagagaaagtcctccatgtggagttgtaggctcctgctgcgccttttagttcctgaagagcttgcaatttgtaagactctagtgtaaaccgttcatgcaagcactcacatactggttgcagttgaggtctaacaacatgcagatgcagtagtgcttgaactttaaatatcatatacttactattctaaaattagatcagcaaaagtgcatgtcatgttaagtttagtgccatgcggacattctatgcatgcatgattcatatagtattgtaatgcatgtagggtgcagattattatatgagaatattcgctggtggatctagttatctaagtttctttatcttccaatgccaccattttcttattttactgttcagctcttataaaatgttttttctgttggctttcgttgctgtctcatttatggatatctttacttttggattgtgccttttagtgcgcctatagtcattgtgtgagatgttcggtggccattattttttgcttgttaagtgctctgaagcatatccggcagagggttgtctcgctaaaagattgtctaatttatagtatgccaccaaataattccaagataaacagtatatagccacaaattcatgtcatgtctatcgcccattagtctgaatttgcaccatgtccacataactagaaagaacagtacaataataatattgtgtccttgccttttgcacatcctttgaggtcattgtgttttaacggagagtctttggtgtgcctgcccagcgaaaaatttgatcagtcctacatctcagcttccaatgtgtagctacagaccaagcggttaggtttctgtggggaatcaacagaatgttaaaattgtcctgtcttacctcaccatcattgttctgagacaggggaacatgcctcactactaaccctccatgatggagggggtagaggagggttgatgtgagaagaacaggcgatatcggcaatttcatcacttggtaggcttctttatgttaattctgtataaactgatttttatcatttggaggtataaaaccccctttcacaatgaagcaaaccgttagccttaaggtgcaaaacctttagattcatgaaacacaagcatccatccaactacatcaaacatgtgaaactttcaggttgcttcctgtgttgacagtcatataaagaacatatgatggtacatgtgccagccagtatttgcactttagatttaagctgaatgagctcctttttcaatgcaatattttggcaagataataaccaaaaattgacacatcattattattttataatgttttaactttttattactacactttgtcactctcattgaggttccttttttttttccttttttttttgtaaaatccaggttcatatggtgaaaatgttaggagaaagtcccacacaccttctgctattgttatcggcagtgggtttgcaggcattgctgcagccaacgctctcaggaatgcatcatttgaggtaatatgtgatgcagtttatggcctaattgtaatgatataggttcaatgatcccttgaagtgcatttcaaatgttgtgaaattcttccccactggttattctaatgtggtttctttccaggttgttcttctagaatctcgtgacaggataggtggtagaattcacactgattactcttttggctttcctgttgatctgggagcatcctggtgaggttcctctctgacaatattttctgaattatttgaaatggtggcaaaagtttatctggaaccattatttttaatccacttccattttgtgtgagcatcaggcttcatggtgtttgtgaggaaaatcccctggcaccaattattggaaggcttggacttccactgtatcgcacaagtggagatgactctgtgctgtttgatcatgaccttgagaggttactagagctagtttattttgtatgtaacttgagagatgatggaccataataatcaaccatttaacatgttttttccctcagttatgctctctatgacactaagggccatcaagttccccaagagctggtagaaaagatagggaaggtttttgagactatattggaagaggtattaccttgtttcagtttccatgcttattgttgttgcatgataatatttttggtacttgtttttccctaacatttatatgtgcagactggcaaactgagggaagaaactaaggaagacatttctattgcgaaggccattgcaattgttatggagagaaatccacacttgaggtttgtaccatccaatttctgcccatgtgcataggttatcctgatcttttggtcattttgcctgacctgtccttgttcacaacaggcaagaagggattgctcatgatgttcttcagtggtatttgtgccgcatggaaggttggtttgctactgatgcggacgcaatctctcttcagggttgggaccaggtaggactttggttcctgatatcagctacaattgccaatattttgctcatgatgtactcatgctagtttgattgctatgtctcatgttcgtactgtgctgtgggtgcaggaggtactgcttcctggtggccatggtctcatggttcgtggatatcgtccagtaataaatactctggcaaaaggcctagatatacgccttggccacaggtatgcatatccatttagtttttccttctcactttaaaagcaaaattcatggttccatccaccattccttattgctaatccacattattttcttttctttagggttgttgagattgttcgccacaggaatagggtggaggttactgtaagcagtggtaaaacatttgttgcggatgctgcagtcattgctgtccccttaggtgttcttaaagcaaacaccattaaatttgaacctaggctgccagagtggaaggaggaagcaataagagaactctcagttggagtcgagaacaaaataattctccacttcagcgaggttttctggcctaatgtggagttccttggagtagtttcatccaccacatatggctgcagctatttcctcaacctccacaaggctactggccatcctgttctagtttacatgcctgcgggtcggcttgcatgtgacattgaaaagctgtcagatgaggctgctgcccaatttgccttctctcagctgaagaagatcctgcccaacgctgccgagccggttagtatcttgacaaaaatatcaaatttggcaatcaagaatctctttatgctagttcttacaaccatgctgcccaaatcttattgcagatacattacctagtgtcacattggggctcagacgagaatacacttggatcctacaccttcgatggggtgggcaaacctcgtgacctgtatgagaagctgcggatcccagtcgataacctattctttgctggagaagccaccagtgtccagtacactggcacggtgcatggcgccttctccactggtctgatggcagctgaggagtgccgaatgagggttcttgagcggttcagggagctggacatgctggagatgtgccaccctgcaatgggggagcagaccgccactgtctcagtcccactgctcatctcccggctgtgaacagaccaggagctgcacaaaaattatagtcttctaaggccatttggcacttggcacccggcgagcgcactaagccattcccctgattgctcgaggaaggcagcattggagcaattatcttatttgcttctccttggcatgaggagtgtgctggtgcagcttgcggtgcgctaaataaagtcactgtgaaaatggagtgtgggagtctggtgtgtattgttgagtataaaatgagggagtcaatatgtagttaagcagggattacggacaatgtgagccatcattactgaacaagatggtgtatgtgtgacgaacaattaatttaaacgatcgatattg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0623300, RefSeq:Os04g0623300