Os04g0623400

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Revision as of 11:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0623400| Description = Exonuclease domain containing protein| Version = NM_001060459.1 GI:115460647 GeneID:4337047| Length = 4979 bp| Defi...")
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Gene Name

Os04g0623400

Description

Exonuclease domain containing protein

Version

NM_001060459.1 GI:115460647 GeneID:4337047

Length

4979 bp

Definition

Oryza sativa Japonica Group Os04g0623400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32077451..32082429

Sequence Coding Region

32078893..32078985,32079916..32080085,32080740..32080945,32081284..32081663

Expression

GEO Profiles:Os04g0623400

Genome Context

<gbrowseImage1> name=NC_008397:32077451..32082429 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32077451..32082429 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcatcgattcttcgatccattcagctgaggaacagtatatggagtagcttccctgtcagatttcttaagcaacaagccggattatcaactgtagaattgcttgatcctagaagctgtgggaaacgacatttcacaacacaagtacaggaacatgggaaggaagttgcggcggcagcaactattctagtttttgatcttgagactactggctatttccataaggatcatagaatagttgagtttgcactctgtgatctttctggaggaaagaatagcacttttgaaactcttgttaatcctgaaaggactgttcctgactacgttgaacatctcattaaaattggcactgatctcgtgtgcaggcctggtatcccaaggtttagtgatgtaatcccactactattggcattcgttcgaagtcgccaagctcctggcaagccagttctgtgggttgctcataacgcaaaacaatttgatgctcgtttccttgctcaggagtttgatcgttgttcagcaccacttcctgcagattggctgttttttgacacccttctcttggcaaaaaagatggtgaaagcagaggggaaaaaacgtcgtacaagcttggaggcactgagagaacactatggcatcgtctcgcatgacgatgcgcatagagcaatgcgagatgttatgatattgtctcaggttttccagaaaatgacttttgatctaaaactgacaaatgaagaactaataaacgaggccatgaagctcccgttccatgtgttctgtgattctgtctgcttgctttttctatggaccagtttcgaacagcagtctgaaccagagagagaagaaatttag</cdnaseq>

Protein Sequence

<aaseq>MSSILRSIQLRNSIWSSFPVRFLKQQAGLSTVELLDPRSCGKRH FTTQVQEHGKEVAAAATILVFDLETTGYFHKDHRIVEFALCDLSGGKNSTFETLVNPE RTVPDYVEHLIKIGTDLVCRPGIPRFSDVIPLLLAFVRSRQAPGKPVLWVAHNAKQFD ARFLAQEFDRCSAPLPADWLFFDTLLLAKKMVKAEGKKRRTSLEALREHYGIVSHDDA HRAMRDVMILSQVFQKMTFDLKLTNEELINEAMKLPFHVFCDSVCLLFLWTSFEQQSE PEREEI</aaseq>

Gene Sequence

<dnaseqindica>3445..3537#2345..2514#1485..1690#767..1146#acgcgccgcgcgacacaatcagttcaccaccgcagccacccctagctaaatccctcggcggcgggggaggtggcggcgtgcgtgggcatctcggcgggggtcgtacgctcatgtcggcgctggtaaactccattccttcctctctctctctctctctctctctctctctctctctctctctctctcgtggtgatgttatgcctggatgatctgggtagggtgcggggggaggagatttggggggagttgggactgttgggagtagggttctgggagggatactggctgtactgaacctgcagatttcttatttgtttctcgctgggggaggttgcgggagttcatagctgcgagcctatcttcctggttggtccgtgaaactgaaaaattagtccattttattttaagaggtgaaatgctcaagcctgtctcaactatagggggtgctggattggatgatgtgtgtcgacaggagtcgcacgcaggcctcatgccttccggaagttcagctgcgcgtgaaaacatcgttttttaaatttaccctttttttaatgcaatttatcctgtcttgtgagttcctttcgtttgctacgtttagaacgtattgactttggaagataagtcttcttttgggggggaggttaaatttcatatcgaaacactgtgaggttgattacttgccatctactctgacatggtagttgtgtgggacaatgtatacaggtttggctctgcgtattggttttaagtggatttcctgtgcacaatgtcatcgattcttcgatccattcagctgaggaacagtatatggagtagcttccctgtcagatttcttaagcaacaagccggattatcaactgtagaattgcttgatcctagaagctgtgggaaacgacatttcacaacacaagtacaggaacatgggaaggaagttgcggcggcagcaactattctagtttttgatcttgagactactggctatttccataaggatcatagaatagttgagtttgcactctgtgatctttctggaggaaagaatagcacttttgaaactcttgttaatcctgaaaggactgttcctgactacgttgaacatctcattaaaattggcactgatctcgtgtgcaggcctggtatcccaaggtgtgttttgcatccaacgaatccatattattcctaatctcttcatcacatgtcttgataacagtcgtcgtcaacatgccctgatgtatttgtcactcaacatgatgctgtgaacagaccatagtattgaattagttatggaaaatgtatgcaatagctctgtattccctctttttcacaagcatgcatgccattaaggcaggttttattgtaaattatttgcttgtaggaataagttagtttttgcaatggaaaactggttatgcatatctcacttcaccaacagttaatttactatttcacttattctgaatgttatcttaatatgactaccacaggtttagtgatgtaatcccactactattggcattcgttcgaagtcgccaagctcctggcaagccagttctgtgggttgctcataacgcaaaacaatttgatgctcgtttccttgctcaggagtttgatcgttgttcagcaccacttcctgcagattggctgttttttgacacccttctcttggcaaaaaagatggtgaaagcagagggtaagtactctcactctaagtcttttgcatgtgaagatactgtatattttggggtcaatttgatttgagcatgcgaaaaaaaggacacacttctcgcagcattttggagtgtgtcattctcactatcttcatccttttaagctagattcttcatttaattacgactcactatctgcttgccaggagcatattgagtaagatgaaacccacacttcatcttttaaccatgcaaaaagagtgcttctgttaggatgttgtgtatggtttagtagtacaactcagtttccatgtttctgctattagcaaatccgtagttcttggaatttgctgaccgttcttgaggtttttatatgacattgtattgtttgtcgaaaagcgaacatattattcttttctggaagttcccgtatgtactgctttgagtgtatgtcataatgaggattaacagaaaagtgaaatgctgatatattgtcctagttaggagcagtagcttggagctgtacatatgttggggcccagttagggacacatctcattttattttgttctgccttactgttttcatttctcaattaggttccctatctgtgctatttggtctattcatttaataataactagccgaagttacatattgttactattctgttgcagggaaaaaacgtcgtacaagcttggaggcactgagagaacactatggcatcgtctcgcatgacgatgcgcatagagcaatgcgagatgttatgatattgtctcaggttttccagaaaatgacttttgatctaaaactgacaaatgaagaactaataaacgaggccatgaaggcaagtgaattcagcaagatttcttaatttttaaaactccagctttttttagtgcttaaacttatttaaccttctgtgcacatgctggatatttttctagctggtgtcatctcggcattaaagaactatgccttttttactattgaaatagtacctgtatttttcaataaaaacctgcaatttggaccgaacaagttgatatcttcattgctaccaggatgataaaaccatggctgaaccatttgcattggatgaccatcacatctatttgatatgcttcggtgctggattcagtgtggaatgatatttctttgatttgtcttgctttatctatgagctgtcagctattgaaaagtattattagtgctttttattcttgggtagcatatgccatttaaattatttgaacttgtgagatcaatacatcctggtggaagttagttgggacctgttattcaatctaacttcagttcaataggatacagcggctgcatttcctgcattagtcattggtttctctaatttagtagtatgattgatttgtagtagaatgaagaagcgctttagtgtttattttgtcactgtcaactctgtttgctaattttggtatcttgtatgactttggatgcaaccaactttctcgtctgagctcttgtttctggtatggtgctgatgccatgttggaattgcatgttctgaatgttacaagcgtcagtgttttacaatcttgttgtagccctgtgcaccatgacttatttttgttccacttgattagagagcgctgcagaaattacttgtttcaatcgcatattattcatcccctttgtgaccatatgtttgtcattttttgcttccctacgatacttgttgaatactgctcagttgaaatatactagggactgtaatgcttggcctttttcttgttgccagctcccgttccatgtgttctgtgattctgtctgcttgctttttctatggaccagtttcgaacagcagtctgaaccagagagagaagaaatttagatgtctcggaggtaattcttttttcagatcttaagctacctattcccaattaccctgctctctccagtttgactggagtattaatagttctttttgtggatttaattgctggtaaaatatatttgaagatattgttcattgaacttttctgagtgtgttcctctgtttcaatttctgttttctatcatgtgcttctctgctccaaacccgataaattgcaaacatgttaatttcttgattatttccatgtatctatcgacgtttttttttaaaaaaaagaaaaacatttacatggctatttgttttgaacccaatctcgctaatcgtcttcattcgttatctggtgagcagcgacctagtactctagtaggtggatattggtgggttccatttgcatgatcaattaagattatctgtttggttttgaggccatggcctcagatgccacttcaacagttgagctatctcacgtttacctagaattgcatgtatattgtagcacctattgcagtttaaattggttatagaatcgcttgcatattgtagcacctactgcactttaaactggttatagaattgcttgcacattgtagcacctactgcactttaaactggtttactttgacgatatcgctttgcgtataatcaactagctttccaaggtcagctggctggttctcttccttgtgttccccttgtgcatgcatctttacactagtcatgctcttttagcgtgttggttagatgatgtgccagtagacagatgcttctagaccccttctttttctcccaaccaaattaaaagcaaccttcgtgctttagccatgtgtccctcgtttctttgaggtagaagcgctttgccctgatctttagagtcaatagcttaaaccggccatattagcatagtggcaccggacaaagttagttgtggcgaggggtcgatcggtcccatgtgcgtgtgacaacaatgctttaccggctcatatgtcaaatatgcttctcacgctaagtgtccgttaggtttgcacacgatcaacggatcaagccatcaaggtacatgggatgatgggagggaaacctggtacccgtacgccctcttgcagcatgagaaatggacctgcaggatcagctatagcacatgcatgttttgctcccagttggttgcagcttcaacacatgggaaacgggcggctccacatccatcttgcgctgaccgcgtcctgcatgtatggcgccagcatcggccacgaggcttcgatttcttcttcctggcccgccatgacccgcactccttccgattgcacgctagcttatttactctttatcgaacttaacaaaggttgatcaaatttatagaaaaaaaattaacatctaaaatatgaaattagttttattaaacttaaaattgaatgtagtttgataacatgtttgttttgtgttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0623400, RefSeq:Os04g0623400