Os04g0627200

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Revision as of 11:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0627200| Description = Heme exporter protein CcmA family protein| Version = NM_001060487.1 GI:115460703 GeneID:4337075| Length = 6233 bp| ...")
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Gene Name

Os04g0627200

Description

Heme exporter protein CcmA family protein

Version

NM_001060487.1 GI:115460703 GeneID:4337075

Length

6233 bp

Definition

Oryza sativa Japonica Group Os04g0627200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32320905..32327137

Sequence Coding Region

32320905..32321082,32322441..32322499,32323962..32324004,32324218..32324298,32324398..32324509
,32325383..32325443,32326472..32327137

Expression

GEO Profiles:Os04g0627200

Genome Context

<gbrowseImage1> name=NC_008397:32320905..32327137 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32320905..32327137 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgctgaagcccccgccgccgcggctcctcctcaacggcgtctcctgcatgcggaacgcgcaggcggtgctccgcgacatcaacgtcagcgtccacgaacggacggcgctggtgctcaccggcgccaacggctccggcaagagcaccttcctgcggatgctcgccggcttctcgcgcccctcggcgggggaggtcctctggaacggccacgacatcacctccccgggcgtgttccagcagtacaagcttcagctcaactggatgtcgctcaaggacgccgtcaaggagaagctcaccgtgctcgataacgtgcagtggttcgagctcctcgaggggaagcacggcaagtcggccccggccatcgagctcatggggctcggcaggctcatgaacgagaaggcgaggatgctctccatgggccagaggaagaggctccagctcgccaggctgctcgccatcgatcgcccgatctggctcctggacgagccgtccgtcgcgctggatgccgagggtgtcaagctgctggagtacatcatagcggagcaccgcaagaagggtgggatcgtgttcgtcgccacgcatttgcccatcgagattgaggatgccatgtcgctccggctcccgcaacggttccctcggaggaaaactttggttgatcttgcctcagatgttcttggggaagtagcttgctttgttgattttatgaacacttctgacctctgtgcaggctgtaacaagggagcactgaatgctccactaataagtccccagggaccattggaggtgctatctgaccccatgctggaagtagctggcccactattcaagacaaggcccaatctagaggatgctagcgtggaatatgtgcgcaatggatcacggtcgaaaattatctttatattgcaaacgatcagagagaagcctccggtttgcattctacaagaaccaagaagggtgtttcattttggcacaagcaagctagaggattctgtctatatacaaagtaagagaaacttgctccagcagctcacccatcagtttgcacttccgattttctctgcagaatgcaattttctgatgcatagatgcatagtcaatgatgttgctcatgtccgttatattggcttgtgtttttcgacagggatgttggaaagagttctgcataaatcgaaggaaaggagtggcccttactga</cdnaseq>

Protein Sequence

<aaseq>MAPLKPPPPRLLLNGVSCMRNAQAVLRDINVSVHERTALVLTGA NGSGKSTFLRMLAGFSRPSAGEVLWNGHDITSPGVFQQYKLQLNWMSLKDAVKEKLTV LDNVQWFELLEGKHGKSAPAIELMGLGRLMNEKARMLSMGQRKRLQLARLLAIDRPIW LLDEPSVALDAEGVKLLEYIIAEHRKKGGIVFVATHLPIEIEDAMSLRLPQRFPRRKT LVDLASDVLGEVACFVDFMNTSDLCAGCNKGALNAPLISPQGPLEVLSDPMLEVAGPL FKTRPNLEDASVEYVRNGSRSKIIFILQTIREKPPVCILQEPRRVFHFGTSKLEDSVY IQSKRNLLQQLTHQFALPIFSAECNFLMHRCIVNDVAHVRYIGLCFSTGMLERVLHKS KERSGPY</aaseq>

Gene Sequence

<dnaseqindica>6056..6233#4639..4697#3134..3176#2840..2920#2629..2740#1695..1755#1..666#atggcgccgctgaagcccccgccgccgcggctcctcctcaacggcgtctcctgcatgcggaacgcgcaggcggtgctccgcgacatcaacgtcagcgtccacgaacggacggcgctggtgctcaccggcgccaacggctccggcaagagcaccttcctgcggatgctcgccggcttctcgcgcccctcggcgggggaggtcctctggaacggccacgacatcacctccccgggcgtgttccagcagtacaagcttcagctcaactggatgtcgctcaaggacgccgtcaaggagaagctcaccgtgctcgataacgtgcagtggttcgagctcctcgaggggaagcacggcaagtcggccccggccatcgagctcatggggctcggcaggctcatgaacgagaaggcgaggatgctctccatgggccagaggaagaggctccagctcgccaggctgctcgccatcgatcgcccgatctggctcctggacgagccgtccgtcgcgctggatgccgagggtgtcaagctgctggagtacatcatagcggagcaccgcaagaagggtgggatcgtgttcgtcgccacgcatttgcccatcgagattgaggatgccatgtcgctccggctcccgcaacggttccctcggaggaaaactttggttgatcttgtgcgttgatgtggggtcaagaattcagctgtatgattctaattcatctccattcatatgaaatccgttggaacaacttcttgatggttcagttttgtgacactttctttcggaaattaacaatgcactcaccatttgaatatgtatgccggttcctttttgctaacataacatacattgaatttggtgcattcacatgtatatgctggtggtgggttattctgttccctaatcaatgtagaaattgaagagtatttgatcatgagttgtgtattcactcgagaagtttcaagtggggggagatcaggtggaggaaatgctgaccaattttgtctgaaggaaatattgactgaatcaggtaacctattgctggtttaagagtaatttcgctgtacacattcaaattgaaacattcctgaatctcatgtattgactaatgtagattatgtacatatagttatgtttgtctgaaatttgtgtacaatggtacatcttacatatatttttgtttacaagcacaatagtttcaaatggcttactgttagttcatttttagggtctgtgctggctagtgcaatatacaactcaaccatgtctgatctacattaactaattattctgcctggtatacattttccggctggtgtttctccttcctatttgaatttttggacaaaaggcatgatggccctgcttttactgaaaacataacagctgtctttcctatttgaatttacttatttgtgtgcaattctcatgaatttaagttaggatgcccctgtagaattgagcaagtatgttggtttatctagaaatttgccatctaatggaagtctcaaatgtttggtatgaatatgaaaagatcctatcgtggtcttctgaatctctaacttatggcttgttacgaatatggcatcacattttgcacgcatgggtgtaatgatgtgcaatagtgttgtgttgttttatactctcattcactcattcctgctgtaaaagattctaacctgttgtgttcataaatataggcctcagatgttcttggggaagtagcttgctttgttgattttatgaacacttctgacctctgtatgccatatgctgaaattaaattttctgtgctctgtactgttttaaaactatttcaggtggcaatcttttgcgttatgtgtagcacattccattcttctacatttttctggcaacagtatcgaagttttccttttgtccttgtataattcattaattctattatgcttgtatacttctaacttataaacctaaactgatgttcacattgatttcagatgcaaagtatgatcaagcactattttgaacttgaagagtagactggatctttcacactgattttctcttcgctgtaatgtgaaatagaagatcattgcactaaccagtcacattcgccttaagttgaatatggaaagtaatgtgcagtagcaatctcgtatgtccatctatgactactcaaattctagttcctactctgaactttcatgtattagtatttacctgctagcttcaaatttctgcaagctactagctttattatcatcagtaatctatcattctgggcaaaccatcatatttttttcttagatgtacaaataatttctgcattattttgtatacggaaatatgtaagatcagtataaccattgtaagtgtttccattctccaaccatgttgttccctctagactaataaaaggtagattttcaagagagatatgcatatctccctctcttgcaatgttatctctttgtacagggaaaaacatatattatttgggagcaatagctaaaatgaagttaaaattttatttccacctgatactctttgagtaacatcatcttgctgatagcaagtcgaatggtctgggatagtttacattcagtatactaggctggtctgtgactctgtgttaactctggtactacacaggtgcaggctgtaacaagggagcactgaatgctccactaataagtccccagggaccattggaggtgctatctgaccccatgctggaagtagctggcccactattcaagacaaggtataaagccacttcccagtccagcaccaagccaccaatactacataaatgcgcactgttcttttgctgtattttgtttggttgttaccttctcttcaggcccaatctagaggatgctagcgtggaatatgtgcgcaatggatcacggtcgaaaattatctttatattgcaaacgatcaggtctagcccagatctgagataacttgttatttttttctaaatgaaaattactgatccgtggtggaattcaattaggatcttggccatctggttcaatacagttgtgttgaaatgctcatgttgtcatctgacataagattgtgattgccctctatcgcgttggtgaactttgttttctcttcactttataaatcccatgtttttcaattgcagagagaagcctccggtttgcattctacaagaaccaagaagggtggtaacttgttgaggtcaaacagaatatttaggatggtttgacacattacgtagcattaattgtcaaaatgctattctattaactaaagggctattggatgtgggaagactgagagtatagataaattgcctgaaataggtagaataactttatgaaaaaagtattggatgtggagacttgagagactggtatatccgtccactcattttcaaagatgatcttttggtttatcagtcctcttattttcaaagataattgttccattagttatctcttcatatcttaggagatatatttggtttgttcctgcaattactactgttttccagcacataaaccttagttatgtttaaatgtttaataattgtgatggaaggagaaagacaactaattgcattgagaaggaggcctgaagatccaaatatagacaagctctaacaggtttgcagcttactcccaagttcagcttactacttgtagcttcacatgtgtgtataaactacttgcattaaattgtcatcatggaagactaccactattaaactggaaaggtatgatatgccattcagataaagctcccaattaattggcagcttagctctttcttttccgagagctgaaacagtatttggagttatggatgggctggtttttattaaacactggagtagaaggaatatgacaatgatacctagagtatatttatgacattaaaactaatgtttgctagaattcaagcatcatgctgatttagctttaaaggatggcctaaaaggggaacttcttctctgtttgcctggttgtgcttaagagaatatgcatgggccaagtgcccaacccttataaatattgccaggtgaaattgttcaccatgcctgcctcttgtttgcactctttccttaaagactgttgtagttggccacatcaaacatttaatcacagattcaaatcctatatcattccttaaaggaacaaatataacgcacacacacacacaaggccttattaatacccatactaatgtgaaaaggtgcagtgaagtgcttgatttccccaaaagtctaggactgagacatggggcataagccataatgtagcgctgccagtacgtcctctctctagggcatactataataactgcttgcactcagatgtcaataccactctgctttaaggcctgatgtttacataattagtacatcataaaactttggaatcggcacttatacttcaacaagcacaataatacaaggccgagtcccacatgtcaatgtcaatgggcattattagtataatttgtatgacttggaaacagtgcttgcattcattcatcaggttgcttaaatgacaagcacttttaatcaaagttcattttaaaaacatatggtgctaagcttacatgatgttagtttttttttttgggtccttttttccatgtttgctacaatccttttgtgtacagtttcattttggcacaagcaagctagaggattctgtctatatacaaagtaagagaaacttgtaagtaaatattaagattaatacggttcctatttgtggggtccacagcgtccatgttaggcagggaaggtagccacatctgctgtagtccatcataacgaaagaaagatgttcaccaatgatatggagatacttgtcatgtgttatatccacggattctccgatggaaaggaagatgctatgaagaaaacatacgctagtttcactttctcgattaataattgtgctacatcatagactacttcaattcttgaaagaaagaaacttatccagtggagcaagttggttgctcctgaagattggatatcaccatcattatggtgtaattctgcggttggttagagatttctctttctaaaagtttgtcatgcatagtgtatcacagacttaagcaaatgctcatctggaattttcccttgatgcttggaaaaataatgggaccaactactttaagtttgcctgtaataaaccggaaaaatagagaaaacaaagtaacattagtacatgccagccaatttaaggagatgaaattgtttaatttaggttgttttaaattaacatttctaagttttagacaattgaaggaggcaagattgtgtataaataggttgctttatatagtagacagttctggaccctaggagtacatagattgtgttctttggtattcataggtaggtttgagagaattgaattcatagaacacgttttcagccctcaatgtggatatccatcgaaaccctgagagtggtctgtctaaattattcaaattatttgaagtacactaccgctaattatttctcttttttctcttcgaaaatgtccttatcaatcatacatgtaccagagcaaaattttaactcgggaaaaggaaattgcttaacagagataattatgatattgaagtgtggttgacaaatatatgaaaaattgaaaagaagaaagcgatgcatataggtattttaaccattaaaactttccttaaaagggggcactcactttctttatcataaacagttgcttattttccttgcactgtaccatgtacgtgaatacgttctttctcatgtgcatgagttactctgattgttttttttatatatatcaaagagtacgctgattgttacatttgtcaaaagaaacactctgcctttttttcctttgtgtaccttttttatatattacatgtatgcatgctgagtctgctgtatgggctacaggtagctcagctggtcatgcaaactactagctgagtcgattgtatatctagccaatcctctggattattactgaatactgattgatgggtactgacgtcaattagctagtatttacattccttgctcgggttcttccaggctccagcagctcacccatcagtttgcacttccgattttctctgcagaatgcaattttctgatgcatagatgcatagtcaatgatgttgctcatgtccgttatattggcttgtgtttttcgacagggatgttggaaagagttctgcataaatcgaaggaaaggagtggcccttactga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0627200, RefSeq:Os04g0627200