Os06g0570100
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Contents
Annotated Information
Function
A rice (Oryza sativa L.) semi-dwarf cultivar, Tan-Ginbozu (d35 Tan-Ginbozu ), contributed to the increase in crop productivity in Japan in the 1950s. the semi-dwarf stature of d35 Tan-Ginbozu is caused by a defective early step of gibberellin biosynthesis, which is catalyzed by ent-kaurene oxidase (KO). Homozygote with null alleles of D35showed a severe dwarf phenotype; therefore, d35 Tan-Ginbozu is a weak allele of D35. Os06g0570100 in gene bank its number is AY660665,it is also called tanginbozu dwarf; dwarf-35;ent-kaurene oxidase gene;Gibberellin Biosynthesis Enzyme.In addition, its finding is by discovering that the Tan-Ginbozu is lack of KO enzyme that involves in the begining of sythesizing GA. And its funtion involves in the three step oxidation of ent-kaurene to ent-kaurenoic acid .Moreover,Rice with half dwarf gene d35 is one of the few applications in the production of sd1,and its product can reach 8.26t/hm2.
Expression
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Evolution
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Labs working on this gene
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References
1.Shifeng Zhu;Feng Gao;Xuesong Cao;Mao Chen;Gongyin Ye;Chunhong Wei;Yi Li: The Rice Dwarf Virus P2 Protein Interacts with ent-Kaurene Oxidases in Vivo, Leading to Reduced Biosynthesis of Gibberellins and Rice Dwarf Symptoms. Plant Physiology, 2005, 139(4): 1935-1945
2.Hironori Itoh;Tomoko Tatsumi;Tomoaki Sakamoto;Kazuko Otomo;Tomonobu Toyomasu;Hidemi Kitano;Motoyuki Ashikari;Shigeyuki Ichihara and Makoto Matsuoka: A Rice Semi-Dwarf Gene, Tan-Ginbozu (D35), Encodes the Gibberellin Biosynthesis Enzyme, ent-Kaurene Oxidase. Plant Molecular Biology, 2004, 54(4): 533-547
3.Tory Chhun, Koichiro Aya, Kenji Asano, Eiji Yamamoto, Yoichi Morinaka, Masao Watanabe, Hidemi Kitano, Motoyuki Ashikari, Makoto Matsuoka, Miyako Ueguchi-Tanaka: Gibberellin Regulates Pollen Viability and Pollen Tube Growth in Rice. Plant Cell, 2007, 19(12): 3876–3888
Structured Information
| Gene Name |
Os06g0570100 |
|---|---|
| Description |
Ent-kaurene oxidase (EC 1.14.13.78) (AtKO1) (Cytochrome P450 701A3) |
| Version |
NM_001064444.1 GI:115468619 GeneID:4341347 |
| Length |
8510 bp |
| Definition |
Oryza sativa Japonica Group Os06g0570100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:22950979..22959488 |
| Sequence Coding Region |
22951140..22951457,22952025..22952218,22952318..22952477,22952594..22952848,22952932..22953072 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:22950979..22959488 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:22950979..22959488 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtga</cdnaseq> |
| Protein Sequence |
<aaseq>MEAFVPGGAGAAAAAVGGFVAAAALAERAGVIAPRKRPNAPPAV PGLPIIGNLHQLKEKKPHQTFAKWAEIYGPIYTIRTGASSVVVLNSTEVAKEAMVAKF SSISTRKLSKALTVLTRDKSMVATSDYCDFHKMVKRYVMSSMLGTSAQKQFRDIRDMM IHNMLSTFHKLVKDDPHAPLIFRDVFKDELFRLSMIQSLGEDVSSVYVDEFGRDISKE EIYNATVTDMMMCAIEVDWRDFFPYLSWVPNKSFETRVFTTETRRTAVMRALIKQQKE RIVRGEAKTCYLDFLLAENTLTDEQLMMLVWEALIEAADTTLVTTEWAMYELAKNPDK QERLYQEIREVCGDETVTEEHLPRLPYLNAVFHETLRRHSPVPLIPPRFVHEDTKLAG YDVPAGTEMVINLYGCNMNRKEWESPEEWVPERFAGGRLEVADMYKTMAFGAGRRACA GSLQATHIACAAVARFVQEFGWRLREGDEEKVDTVQLTAYKLHPLHVHLTRRGRM</aaseq> |
| Gene Sequence |
<dnaseqindica>8032..8349#7271..7464#7012..7171#6641..6895#6417..6557#6101..6262#5846..6006#88..214#gcgagttgtcgcttttcctccccaactccacgatcgagtgaagcggacgagggcgacggcggcgagcgcgcgcacagcgtgtgatccatggaggcgttcgtgccgggcggcgcgggggcggcggcggcggcggtcggagggttcgtcgccgcggccgcgctagccgagagggccggcgtgatcgcgccaaggaaacgccccaacgcgcccccaggtcagccgccccccccccccccatctctcaatctctctctcactcactcactgtcactgtttgatggaatgccgccttggtgagtggtggggattggcacttaccatcggtggagaggggtgagattcgcatcgcaccgggaatcaacaggaagtggcctcgccgccatctcatccatcgcggtcgcgccaggccccgccgacgaggtccgggccgcacggcgctcgccggaccacggcttggtgctgcccacgggcgcacccccccagccggcgcagatggagccgctcggcgctcgtcgtcgcacgcgtgctccacctcgccgtctccgccatcgccggcacccactcacacgctccctcgccgggagagatcggggagaagagaagaatagaaagggggattagggtttacctcagccgccggcgatttctccggcacgggggagatcctggccgtccaacagatcggacggtcgacctcgctcccgcgttggcccgctgtgctaatgggcccacccgatttcatgggccttccgcttccgcaccacctgggccgcgccgccgcagctcttagcccgcgcgcacatgcggcacgaacgcctcttgccccatttccaccgccctctcccgcttccggcgatgtccacgccgaacagcctcacgacacgtgctgcttcgctgcttgtaattggcttctcgtcgccggtggccgccgccgtgttgttcttctagcagtcgatgaagagcagctcgtcggcgcagaggcccttctccctcacgaatcggctccatcccttggtcagcacgtagctctggctgctgttcctggacgagtcacaggtggagaaacctttgtattccggttcgtaacaccaatcgggactaaagttaggatctttagtttgtactcccggcggggtcggggcagcagcggtggcggcagttggagggtttgtcgctgcggccgcgctcgccgagagggccggcgtgatcgcgccaaggaaacgctccaacgcgcccccaggtcagccgcccccccaccaatctctgcatctctctcactcacccgctgtcactgtttgatggaatgccgcctcggtgagtggcgcgcgatcggcgaattggtggagagaggtgagattcgcatcgcaccggtgagtttctgaggaattggagatgtgtgttgctgcttgaaatcaaaaactctgatctcttgattccctttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccgttctccgtcactgtctcttctcactctctgtctcttgatctctccattgatatcactcggagacggaggcggagacggagacagcggttgatgccactgctcgcgtaggaacatcttgaattttctcccctcctttttgatctccctttgatggaaacagaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttccttttcttcatgttattctttttttctattcaagtagaacgatatacctcgtggtgatcatggtagagaccgaaaatgtaaagcatttccattatctgcgaacagaatgatgggatgtttagtattttctcaaacaaacataggcattgcactgacaggattgaattctaaataaaggaataaataaaagatgggccaaattgtttcgagaatcactggaccacactttgaattgtttggatgaaatttacccgtatgtttgcaaccgctacatgttaggcccagtaacctctattaagggaattcgtttcatttttttccacaaaaaatgtttcacctagtatattcacaatgtttcactatgtataaatctaatgttttaataaattgaaacatttttttgcaacaaatcacccacatatttagaaaccctctattaagggaattcgtttctttttttgttccaccaaaaatatttcaactagtgtatttataatgtttcactatgtatagatcaaatgttacagtgaactgaaacattctttcgttgttgaaacattgtttttatataaagtgaaacaacgtctagtttaaacgattgaaacattttcgatctacttattgaaacaattctgatatacttggtggaacatcgtgcaacatttaaaaataattcaataataagctaaatttttttttgtcagaatatatccatatatggtcttgttttaaagatttaattgcaacgaatttaatggtgcaatcgaatcatgatttaatttggataaataatttaagagaaaaaatagtttaaagtggttttgcacgcatgcgtcatgctgatgtcagcgcccgatttttcccctccctaatcggacgcccgatgcgtaggctcctccattcttttcttagattaaagaaagaaaacaaaatagtactataacaatattccctaagctcttgtagttagatgctattttagaacatgttaaaacacgtcgttttcatcatcgggataacaaaaaaataaataaattaattaatggccgtatttttttttaaaaaaaacgaatctcgttctttatatggcctagtctcgtatggatggacgtgcaaccgcgcgacgcgagttgtcgcttctcctccccaactccacgatcgagtgaagtgggcgacggcggcgagcgcgcacgcagcgtgtgatccatggaggcgttcgtgccgggtggcgcgggggcggcggcgccggcggtggcggcggtcggagggttcgttgccgcggccgcgctcgccgagagggccggcgtgatcgcgccacggaaacgcaccaacgcgcccccaggtcagccgccccccatctctctcactaactcgctgtaattgtttgatggaatgccgcctcggtgagtggcgcgcgattggcgaatgactcactcacgattggtggagacaggtgagattcgcatcgcaccggtgaattttccgacgaattggagagttgtgtttctactacttgaaatcaaaacctctgatctcttgattcccttgaagatttgagagccaatcaagtttgcattcgccacaattttcgcaccattctccgccgctgtctcttctcactctctctctctcttgatctctccattgatatcactcggagacgaagacggagacagcggttgatgccgctgctcgcgtcggaacatcttgaattttctcccctccttttgatctccctttgttggaaacggaagcttttgtcctgcctttaggcagagacgatcagaagaatctatcctctcctttgctttacattgcctttttttttccttttcttcaagttattctttttttttcttctattcaagtagaacgatatacctcgtggtgatcatgtcagagaccgaaaatgtaaagcatttccgttatctgcgaagagaatgaatgaattttctgcactaacaggattgaattctaaataaaggaataaataaaagataggtcaaattgtttcaagaatcgctggatcacactttgaattgtttggatgaaatttaccaaaaagcaagttgctcttcagagggcatgcattcatgcccttcaatagggcgtagcaaggaattagaggtcctggtgcgaaaggtataatgggacctcaacatatgattacatctagttctaatcgatttagctttagatattaagccctgttgtgccttctacttttagttttgggtcttaggttctctgaccgtctgggctttagcattttagttatgctgctaattaagtactccctctgtccctaaaaaatcaacatagtaccagatgtgtcacatcgtattactataaatctggacatagatctatcatattcgtagtactatgatgtatcataccggtactatgttgattttttatgtgacggaagaagtatatacttagcacttcatgtaattaagatttggggctgaacaatcgcacacctcactatgttactgtacggcctgttctccaaacagacagccctttctctctcgctattaccaaaatttcagacgatttttttatatttggaatttcgaatattttttcatgaatttgatcccccctcctcccgtaaattcaaacaaatttaaaatttttatgccagaggcatttcctgcttactggtaccttcaaattaaccggtgctggattacagatagaggatgagccgaggggtttggcggtagcttgcttgtttgcagataataattttatttaaacatataaatttgtatgaagcataaagcggaacgcctttcttaccagtgacttactgtagccttccgtttatttttggctgggagcgtgatttttcagttgcaactgtagaaattgatttttcaattgcagtagcttttcccaaagctatcctcatcggaccacttggatagcagtttttttggtaattattgttctcttgatttttttctctagcacattagttcttctgattaacgtagtgtggatttgaaaattaggaaactatcatagagtgaaacattctaagtaaagaatttaatgatatcacatagagactagctttttgtatagtatgtcataaccttaacaaactttagaaaactttcattaatccataaaaagcttccaaatttgttcctctgttttataaagatttcgtgctgtgttagcttgcgcttattgccccatgatgatggaaggacatacatctgttttccattaacagccaataaattcacataactcgcgttattactttgcaaacataactgaaatgacattccctaaatttgtcgattgtttttcaatcttccttttgatatatcaaaattttaaaaaagtaaatatagtataagtagacaaaagactcccactttcactggagacacatggtacatcatgtgttcgtggaacaacatcgacaatatgtacttaaccaaacccaatcggcatgtctatgcgaatggcagaatgtgtatggacagcaccaagagtccaaggcagaaaaaaaaggagagtaaatggcataataaataaagaaaaacctgatgacccatagaaacgaacaggagaattttgaaaatattcagatcagcgctattcattttgattttttataagtcaaacttctttaggttcaatcaaattgaaataaagaaactatgaaaatatgttcaatgtagataaactaatttagttctataagtattgctatattttttttataaacttgatcaaactttcaagaagtttgatttaaagaaaaagtcaaaacaatttataatatgaaacagatggagtgtatatattttgttgacccacttgtgagttgagagtgcaaagtattaattattgtggtctatagtcacctaattctattcgaccatcatcatgtcaatatctgacaaaatctgacaacatcaccgaagaaagggacaacactaattcatcactaggctagttacttgcatgaatatatggtgttatcatctatgcaaacaaattatcagaataactcatttcaagtttttagtctagtgtgcaagttctaagtctcctatgattctatgattctatttcattgtcatgcagctgttcctggtttacccattatcggaaatctgcatcaactgaaagaaaagaagcctcatcagacctttgcaaaatgggctgaaatttacgggccaatctacactataagaaccggggcttcttctgtagttgtgctcaattcaactgaagtagccaaggaggtaacttggaagttgtctatcatttttattgacttgcatagctcaagaatgatagtctcaagaaaccatggatttactgtactctcttttgcaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactgacagtgcttactcgtgataaatccatggttgctaccagcgactattgtgatttccacaaaatggtgaagcgttatgtcatgtcaagcatgttgggtacttctgcacaggtatacttctcaacaatttcatttttcatttttagtactgattattctcaataactccagtgtgcattttcagattttattatctgctaccagttacactttcagagtttcagtatctgtggtctgacaacgcaaatgcttccataaatttcagaaacaatttcgtgacataagagatatgatgatccataacatgttaagcacttttcataaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccaggtttggattgtctctctgaacttgaactgtcagatggtcgatttgttatttctggcactaacaattaatgtcgcaaacttcagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgaccgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaaactagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggtgaggaaaggcatactttgacaaatgacatctttcatatttgcttctatgccaaaaaaaaaaaaaaacttgcagagatcatcttttaactccatgaaactgagatatatgtgcaggcaaagacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggcaagaaatattgttactctgttccagctcattgttggcattcttggcattatcaaccaaagctttttatttttggccttcttcttgttgtcatgccaggaacggctttaccaagagatccgggaggtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaacgccgtcttccacgagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtccacgaggacaccaagctcgctggctacgacgtccccgccggcaccgaggtaagcacaaccactcgggccgaaactttcgtgttttcggtacttgttttgcacgaaattatttgagtttttaaccgaatttgtataaaattttgaccaaattcacaaaactttggaaaattctgaaaattttgggcgttatttttaagataattgatagaaatctgacctctatatccacagtggaccataagaaaacaagctttgaataaaaataacacaagattaagctacacttttcttctatatccttgtttcaaacctgccttggcacatcccgttgaaatccaatactccctctgtcctaaaatatagaagcctagaatcggatatgacatttcctctatcctaatactaggaaattttctatcatgtgctaggttcttatatttttggacggagtattttttatcatatcaggcaaacttgtcgttcttgacttctcgtagagttttcgggtgggatataattgcttgcctggggagtccaaaattttaatcactggtcaactcgccgatcagtgatcaaaatcccctaacaatctaacaagtgatggtcatgtggcagatggtgatcaacctgtacgggtgcaacatgaacaggaaggagtgggagtcgccggaggagtgggtgccggagaggttcgccggcgggaggctcgaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggcctgcgcggggagcctgcaggcgactcacatcgcgtgcgccgccgtcgcgcgcttcgtgcaggagttcgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcgcagaggaaggatgtgaaccattatattcattggaagctgttgctcgttgaataatgatatatagttatctttgagatgtatttactattagcaaaatctccatgctttgttatggataggagaaaacatattataatatatcatggactatatttcttttatcaaatatggttgtat</dnaseqindica> 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