Os04g0630800

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Revision as of 11:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0630800| Description = Similar to Anthocyanidin reductase| Version = NM_001060512.1 GI:115460753 GeneID:4337100| Length = 2661 bp| Definit...")
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Gene Name

Os04g0630800

Description

Similar to Anthocyanidin reductase

Version

NM_001060512.1 GI:115460753 GeneID:4337100

Length

2661 bp

Definition

Oryza sativa Japonica Group Os04g0630800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32484150..32486810

Sequence Coding Region

32484184..32484304,32484671..32484837,32484951..32485151,32485698..32485857,32486159..32486396
,32486493..32486640

Expression

GEO Profiles:Os04g0630800

Genome Context

<gbrowseImage1> name=NC_008397:32484150..32486810 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32484150..32486810 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggcggtcgagaggaagacggcgtgcgtcaccggcggcaacgggtacatcgcttctgcgctcatcaagatgctgttggagaagggatatgctgtcaacacgacggtcagaaaccccgatgacatggcgaagaactcccacctcaaggacttgcaggcacttggccccttgaaggtcttccgcgccgacatggacgaagaaggaagcttcgacgatgccatcgccggctgcgactacgccttcctcgtcgccgctccgatgaacttcaattcagagaatcctgagaaagatctggttgaagccgccgtcaatggaacgctcaacgcgatgagatcgtgcgcgaaagtagggacggtgaagcgcgtgatcataacatcgtcggacgcagcgatctccagaaggccgctgcaaggcgacgggtatgtgctggacgaggagtcctggtctgacgtcgactacctgagaacagagaagccgccagcctgggcgtacagtgtgtccaaggtgcttttggagaaggccgcatgcaagttcgcggaggagaacaacatgagcctcgtcaccgtgttcccggtgttcaccttgggcgcagcgccggcgccggtggcgaggacgagcgtccccggcatcctctccttgctatccggtgatgagacgcatctcgaagtcctgaagcccctgcagtgggtcaccggctccgtgtcgatcgttcacgtcgacgacctctgccgcgccgagatattcctcgccgagaaggagtcatcgtcattgtcgtcggcagagtcgtcggcgaggtacatctgctgcagcttcaacaccaccgtcttggcgcttgcccgtttcatggccggaaggtacccgcagtacaacgtcaaaaccgaccgcttcgacgggatgcctgagaaaccgagagtctgctgttcgtcggagaagctgatcagggaagggttcgagttcaagtacacgaatatgggcgacatactcgatgaccttgtagagtacggcagggccctgggaattctaccacattga</cdnaseq>

Protein Sequence

<aaseq>MSAVERKTACVTGGNGYIASALIKMLLEKGYAVNTTVRNPDDMA KNSHLKDLQALGPLKVFRADMDEEGSFDDAIAGCDYAFLVAAPMNFNSENPEKDLVEA AVNGTLNAMRSCAKVGTVKRVIITSSDAAISRRPLQGDGYVLDEESWSDVDYLRTEKP PAWAYSVSKVLLEKAACKFAEENNMSLVTVFPVFTLGAAPAPVARTSVPGILSLLSGD ETHLEVLKPLQWVTGSVSIVHVDDLCRAEIFLAEKESSSLSSAESSARYICCSFNTTV LALARFMAGRYPQYNVKTDRFDGMPEKPRVCCSSEKLIREGFEFKYTNMGDILDDLVE YGRALGILPH</aaseq>

Gene Sequence

<dnaseqindica>35..155#522..688#802..1002#1549..1708#2010..2247#2344..2491#ggtgggttgttgtagcgaccgatcgacgacgacgatgtcggcggtcgagaggaagacggcgtgcgtcaccggcggcaacgggtacatcgcttctgcgctcatcaagatgctgttggagaagggatatgctgtcaacacgacggtcagaaaccccggtaagattctcctccttttttcactctctagttcgtgttttttactttttttgcagtgtttcttccattcatatgatcatatcctcggcctgctagtaccatatgagctaattagcgagtgttttcgcttaaccactcattagcaaatggcaggcttagccgcacatgtggacaatatcatatctttcgaaagggagaagttgtcaaatcttatccttttccaacttccaaccgatagttacatatatatatcgtgacatatgatggatcaaaatatgatgcgactttatcaatacgatggtgtgaattttcagagtttcagtttcatctctgaagattccactaattgctgcggtttgtattcagatgacatggcgaagaactcccacctcaaggacttgcaggcacttggccccttgaaggtcttccgcgccgacatggacgaagaaggaagcttcgacgatgccatcgccggctgcgactacgccttcctcgtcgccgctccgatgaacttcaattcagagaatcctgaggtgaacagctaattaacatcactattgactctgatactctgtaactgatgtgctctactaatcttgatttcctttttttttttttttttttgcgatgttgatggtggtggcagaaagatctggttgaagccgccgtcaatggaacgctcaacgcgatgagatcgtgcgcgaaagtagggacggtgaagcgcgtgatcataacatcgtcggacgcagcgatctccagaaggccgctgcaaggcgacgggtatgtgctggacgaggagtcctggtctgacgtcgactacctgagaacagagaagccgccagcctgggtgacgttcctctctcttgacattttcacatctccatcttatccataaattcaagaaaacttttaccgtacaatatatactaatatatgctactactagtatgtgctgccagtacaaacaattcaaagatttttatgaatatttccttgtgctttaatatattatagtataaaattaaagggggtaaaattgtctttccatactattggatgagggtaattatgtaaactcacaacttatagcgaaatactccctccgttaaaaaaaaatctcgtaacatcctagagtgtctagattcgttttactagaatagtaggatgtgtcataagaggttgagttatttaaggacagagggagtagagataggcattattttcaccaccatgagacactgcgctgttgcaaactagaatgaaaattactaaaataccatttttaatttgataaaaattcttaaaatactcagtatattggaccgaaaagttctttaaatttaccaacgaaaataagcttgcacccaattggcaatggcatttgcgtttgcaggcgtacagtgtgtccaaggtgcttttggagaaggccgcatgcaagttcgcggaggagaacaacatgagcctcgtcaccgtgttcccggtgttcaccttgggcgcagcgccggcgccggtggcgaggacgagcgtccccggcatcctctccttgctatccggtgagctagaagcaccagcaacagcaatcaaatcaacaagctagctcccacaaagggcctgtttggggggagcttctagctgctgcagtatattctagaattagaagttgctctaaacagttcagcttttgatttagattataagaagatataattgtaaaatccaaaaaatgaagctgggaaacacaatttttccagattgtaatcttaaaactccaaacagaccccaagtctcaacactctttgcaacgcgtgttacacagtttaagttggctgctgtttttttactactacttctcaggtgatgagacgcatctcgaagtcctgaagcccctgcagtgggtcaccggctccgtgtcgatcgttcacgtcgacgacctctgccgcgccgagatattcctcgccgagaaggagtcatcgtcattgtcgtcggcagagtcgtcggcgaggtacatctgctgcagcttcaacaccaccgtcttggcgcttgcccgtttcatggccggaaggtacccgcagtacaacgtcaaaaccgaccggtacgatcgaattgttgaccaacttggaaatccaaaatagataaatattgttgtgttcgatctgacgagcgagtgatcgtctctgtatctttgcagcttcgacgggatgcctgagaaaccgagagtctgctgttcgtcggagaagctgatcagggaagggttcgagttcaagtacacgaatatgggcgacatactcgatgaccttgtagagtacggcagggccctgggaattctaccacattgaacgaatagctgatgctgctctaccttcaacctagctgtcacgaggaccgaactggagtatgcgcttgcgaaataagtgatcagtgtttttaaagaaaaaaaaatagtacagtgttttaagatgagcctaatacacagtggataatggcaatgaagtttaatacccttaga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0630800, RefSeq:Os04g0630800