Os04g0632700

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Revision as of 11:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0632700| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001187176.1 GI:297723482 GeneID:927109...")
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Gene Name

Os04g0632700

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001187176.1 GI:297723482 GeneID:9271091

Length

5130 bp

Definition

Oryza sativa Japonica Group Os04g0632700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32596130..32601259

Sequence Coding Region

32596130..32596432,32596525..32596643,32597130..32597340,32597489..32597561,32597948..32598222
,32598957..32599076,32599471..32599664,32599733..32599837,32599951..32601259

Expression

GEO Profiles:Os04g0632700

Genome Context

<gbrowseImage1> name=NC_008397:32596130..32601259 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32596130..32601259 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagcagcaaccgccaacattttccaccttagcctcaccttcttcttcatggtcctccttactctcggaacatctgccgccggcgttgcatcggacactctgagcaatggccgcaacctcactgacggcaacacgctcgtgtcggccggtggctccttcactctgggcttcttctcactcggcttgccaaacaggagatacctcgcgatatggttctccgagtccgcggacgccgtctgggtggccaaccgtgacagcccactgaacgacaccgccggcgtactggttaacaatggcgcgggcgggctcgtcctactcgacggctccggcagggccgcctggtcgtcgaacacgactggcaagtcttcatcagcgacggcggcgcagctgctggagtccggaaacctcgtcgtgcgcgagcgcgaccagctgaacaccggtgtcttcatctggcagtcgttcgatcacccgtcgaacacactgatcgccggcatgaggctcggcaacaaccggcagaccggcgacgcgtggttcctctcgtcgtggcgcgcgcacgacgacccggcgacgggagactgccgccgcgtgctggacacgagggggctcccggactgcgtcacgtggtgcggcggcgccaagaagtaccggacggggccatggaacgggcagtggttcagcggcgtcccggagatggcgtcgtacgaatccatcttctcgagccaggtggtggtcacgcccgacgagatcgcctacgtcttcaccgccgccgccgccgccggctcccccttctcccgcctcgtgctggacgaggccggcgtgaccgagcgcctcgtgtgggatcccagcagcaaggtgtggatcccgtacatgaaggcaccgcgcggcgtgtgcgacgactacgccaagtgcggcgcgttcgggctgtgcaacgaggacaccgcgtcgacgctcttctgcagctgcatggcggggttcagcccggtgtccccctcgcggtggtccatgagggatacctccggtgggtgccggaggaacgcgccgctggagtgcggcaacgggagcaccacggacgggttcgtgccggtgcgcggcgtgaagctccccgacacggacaacgccacggtggacacgggcgccacgcttgacgagtgcagggcgaggtgcttggccaactgttcctgcgtcgcctacgccgccgcggacatcagcggccgcggctgcgtcatgtggatcggcgacatggttgatgttcgttatgtggacaaagggcaggacttgcatgtgagattggcaaagtctgaactagttaacaataagaagaggactgtggtaaaaattatgctcccacttacagcagcatgtttgcttctgctgatgagcatattccttgtatggttatacaagtgcagagtcctgtcaggcaaacgtcatcagaataaggttgtccagaagagagggattctaggatacttgagtgcatcaaatgaacttggagatgaaaatttagagctcccgtttgttagttttggagaaattgctgctgccacaaacaatttttctgatgacaacatgctcggacaagggggcttcgggaaggtttacaagggaatgctagatgacggcaaagaagtcgcaattaaaaggcttagcaagggttctggccaaggagcagaagagttcagaaatgaagttgttctaattgccaaactgcagcatagaaacctcgcatggaacttgtggaagaacgacagggcgatggatttgatggactcatccatttctaagagttgctcaccaactgaagttttactatgtatccaaataggtctattgtgcgtgcaagataatccaaataatagaccactcatgtcttcggttgtgtccatgttggagaacgagaccacaacgctttcagctcctatacagcctgtgtattttgcacatagggcctttgaaggcagacaaacaggtgaaaatagcatcagcttattagagggacggaccaagcttggcctccctcccattgaagggaagcccttgccatgcttattggattttgttccaacaaacttgggcatgctaggcggtaacaaagaagtggccattaaaaggcttagcaagcattctggacaaggagtagaagagttcagaaatgaagtggtccttattgccaaattgcagcacaaaaatctagtcaggcttcttggttgctgcattcacggagaggaaaagcttctcatatatgaatacttgcccaacaaaagcttggattacttcctttttggcatcttctctgtcaagtctgacacctacagctttggtgttttagttttggaacttataagcggctctaagataagctctcctcatcttataatgggttttccaaatcttatagcctgtgcatggagcttgtggaagaatggaaaggcagaggatctcgtggactcaattattctgcagatatattcacttaatgagtttttgctctgtatccatgtaggactgttatgcgttcaggaagacccaaatgctagaccactcatgtcatcagttgtggccatgctcgagaatgaagccacaacacttcctactcctaagcaacctgcatattttgtgccaaggaattgcatggcaggaggggcaagagaggatgccaacaagtctgtgaacagtataagtcttaccacactacaaggacgttag</cdnaseq>

Protein Sequence

<aaseq>MEAATANIFHLSLTFFFMVLLTLGTSAAGVASDTLSNGRNLTDG NTLVSAGGSFTLGFFSLGLPNRRYLAIWFSESADAVWVANRDSPLNDTAGVLVNNGAG GLVLLDGSGRAAWSSNTTGKSSSATAAQLLESGNLVVRERDQLNTGVFIWQSFDHPSN TLIAGMRLGNNRQTGDAWFLSSWRAHDDPATGDCRRVLDTRGLPDCVTWCGGAKKYRT GPWNGQWFSGVPEMASYESIFSSQVVVTPDEIAYVFTAAAAAGSPFSRLVLDEAGVTE RLVWDPSSKVWIPYMKAPRGVCDDYAKCGAFGLCNEDTASTLFCSCMAGFSPVSPSRW SMRDTSGGCRRNAPLECGNGSTTDGFVPVRGVKLPDTDNATVDTGATLDECRARCLAN CSCVAYAAADISGRGCVMWIGDMVDVRYVDKGQDLHVRLAKSELVNNKKRTVVKIMLP LTAACLLLLMSIFLVWLYKCRVLSGKRHQNKVVQKRGILGYLSASNELGDENLELPFV SFGEIAAATNNFSDDNMLGQGGFGKVYKGMLDDGKEVAIKRLSKGSGQGAEEFRNEVV LIAKLQHRNLAWNLWKNDRAMDLMDSSISKSCSPTEVLLCIQIGLLCVQDNPNNRPLM SSVVSMLENETTTLSAPIQPVYFAHRAFEGRQTGENSISLLEGRTKLGLPPIEGKPLP CLLDFVPTNLGMLGGNKEVAIKRLSKHSGQGVEEFRNEVVLIAKLQHKNLVRLLGCCI HGEEKLLIYEYLPNKSLDYFLFGIFSVKSDTYSFGVLVLELISGSKISSPHLIMGFPN LIACAWSLWKNGKAEDLVDSIILQIYSLNEFLLCIHVGLLCVQEDPNARPLMSSVVAM LENEATTLPTPKQPAYFVPRNCMAGGAREDANKSVNSISLTTLQGR</aaseq>

Gene Sequence

<dnaseqindica>4828..5130#4617..4735#3920..4130#3699..3771#3038..3312#2184..2303#1596..1789#1423..1527#1..1309#atggaagcagcaaccgccaacattttccaccttagcctcaccttcttcttcatggtcctccttactctcggaacatctgccgccggcgttgcatcggacactctgagcaatggccgcaacctcactgacggcaacacgctcgtgtcggccggtggctccttcactctgggcttcttctcactcggcttgccaaacaggagatacctcgcgatatggttctccgagtccgcggacgccgtctgggtggccaaccgtgacagcccactgaacgacaccgccggcgtactggttaacaatggcgcgggcgggctcgtcctactcgacggctccggcagggccgcctggtcgtcgaacacgactggcaagtcttcatcagcgacggcggcgcagctgctggagtccggaaacctcgtcgtgcgcgagcgcgaccagctgaacaccggtgtcttcatctggcagtcgttcgatcacccgtcgaacacactgatcgccggcatgaggctcggcaacaaccggcagaccggcgacgcgtggttcctctcgtcgtggcgcgcgcacgacgacccggcgacgggagactgccgccgcgtgctggacacgagggggctcccggactgcgtcacgtggtgcggcggcgccaagaagtaccggacggggccatggaacgggcagtggttcagcggcgtcccggagatggcgtcgtacgaatccatcttctcgagccaggtggtggtcacgcccgacgagatcgcctacgtcttcaccgccgccgccgccgccggctcccccttctcccgcctcgtgctggacgaggccggcgtgaccgagcgcctcgtgtgggatcccagcagcaaggtgtggatcccgtacatgaaggcaccgcgcggcgtgtgcgacgactacgccaagtgcggcgcgttcgggctgtgcaacgaggacaccgcgtcgacgctcttctgcagctgcatggcggggttcagcccggtgtccccctcgcggtggtccatgagggatacctccggtgggtgccggaggaacgcgccgctggagtgcggcaacgggagcaccacggacgggttcgtgccggtgcgcggcgtgaagctccccgacacggacaacgccacggtggacacgggcgccacgcttgacgagtgcagggcgaggtgcttggccaactgttcctgcgtcgcctacgccgccgcggacatcagcggccgcggctgcgtcatgtggatcggcgacatggttgatgttcgttatgtggacaaagggcaggacttgcatgtgagattggcaaagtctgaactaggtacacatgactatcacaaaattgcacgcatgtgcattcatttgcctgaaactaatgggttcagcaattaattactttatggttttctcggtgaaaattttcttcccattcagttaacaataagaagaggactgtggtaaaaattatgctcccacttacagcagcatgtttgcttctgctgatgagcatattccttgtatggttatacaagtgcagaggtaatactcgcagcttatatcctctactcctactagagctaatattaacacactatatatatttgtagtcctgtcaggcaaacgtcatcagaataaggttgtccagaagagagggattctaggatacttgagtgcatcaaatgaacttggagatgaaaatttagagctcccgtttgttagttttggagaaattgctgctgccacaaacaatttttctgatgacaacatgctcggacaagggggcttcgggaaggtttacaaggtacaaaataagttctatcttgagaattacaatagggacaaaaactaacatatataatactataatttttaactaataatatagttaatataggctaaaacaactagagattgaaattttacctagggtctcgtgaccccgtatagtatgctgtaggaactaggaactaggaagtagcatgtcaaaaaaaaaaggaactaggaagtaggaatgcccctgcagtgtactgataaattagcagagagatttttaccatcccaaatatggaggtacctcaaattaacattaagactgtagtaccttttcagacttcagtctttaggaactgtaaaaccactcatttacaaatgaacagccttcttaataaaaaaaataaagtgattaaattatgcagggaatgctagatgacggcaaagaagtcgcaattaaaaggcttagcaagggttctggccaaggagcagaagagttcagaaatgaagttgttctaattgccaaactgcagcatagaaacctcgttagacttcttggttattgtatatacggagatgagaagctgctaatttacgaatacttgccaaacaaaagcttggatgctttcatttttggtactgttcagatttatatactacagtattgcataaacttatcatatgatccaaagaaacttggctgcatacttaataataacatagtttaccattcttatagatcatgcaaataaatatgttcttgattggccaacaaggttcaagataatcaaaggagtagctagaggacttctttatctccaccaagattcaaggttaactgtaattcatagagatctcaaaccaagcaatatcttattggatgttgatatgagtcctaagatatcagattttggtatggcaagaatctttggaggcaaccagcatgaagcaaatactaacagagttgttggaacatagtgagtcattcatgcattaatgttcacaatgtttatttgctcgaatctttacttactgctaaatcattaagcagcggttacatgtctcctgaatatgcaatggatggcgccttttcagtcaaatccgacacatatagctttggtgttatactcttagagattgtaagttgcctgaagattagcttgcctcggctgacggacttccccaatttgttagcttatgtaagtatggtggaatgctttatctctacaattcagattaattgtactaattttatatggacttgattccactgtttcaggcatggaacttgtggaagaacgacagggcgatggatttgatggactcatccatttctaagagttgctcaccaactgaagttttactatgtatccaaataggtctattgtgcgtgcaagataatccaaataatagaccactcatgtcttcggttgtgtccatgttggagaacgagaccacaacgctttcagctcctatacagcctgtgtattttgcacatagggcctttgaaggcagacaaacaggtgaaaatagcatcagcttattagagggacggtaggtgtttatgttatttttctgcacgctaagtgcttcctttaggagcacatggtgaaacatgtataattgatatttggagaggagtaggaccgtaacatatgtggcatacaattgcattttttgtgatgataaaattgattatttaccatcgattttgttcctcggtacccaaactttgagccatcgcaccggaaacgagttaagaagacacacccgtaacccattgatctcgacttgaaatcgggttcttgtcaacatgggcttggcgtccttgtgggcattagcgggccgtatttgttctggcagaattgaactagatgacacaggaaccattcgaggaaagggctctcatccttcatcctcttcctctcatctcctcacaggaccaagcttggcctccctcccattgaagggaagcccttgccatgcttattggattttgttccaacaaacttggtgttaaataattgagaagaatgtatgattgtgttaagaatcaaatatagaacctcaggggtgaaaccatacatccatgatactgtgtgaacaagtgtatatcccgatgaactttcttaataaaaattaaagtgattaaattgtgcagggcatgctaggcggtaacaaagaagtggccattaaaaggcttagcaagcattctggacaaggagtagaagagttcagaaatgaagtggtccttattgccaaattgcagcacaaaaatctagtcaggcttcttggttgctgcattcacggagaggaaaagcttctcatatatgaatacttgcccaacaaaagcttggattacttcctttttggtatgtcctaatcatatattccttttttaccttttctttttccacgtttggtggaagactgttaccaaaaggccatgtgtgaacaactataagtatcgttttatattgttcacggtagatgattcaaaaaagtctatgcttgactggcaaacacggttcaacataatcaaaggagtagctagaggacttgtttatctccaccaagattcgaggatgacaataattcacagagatctcaaagcgagcaacattttattggatgaggggatgagccccaaaatatcagattttggcatgacaaggatctttggtggcaaccagcatcaagcaaacactagacatgtagtcgggacatagtgagtaactattgcactacttatgattacaatactaacttttatatacttggaaaacacttaaataacttacactcgttggtgacatgattcatatagtggttacatgtctcctgatatgcaatggaaggcatcttctctgtcaagtctgacacctacagctttggtgttttagttttggaacttataagcggctctaagataagctctcctcatcttataatgggttttccaaatcttatagcctgtgtaagtgtgtaagttctaagaaatatcaaaatgcataaagtttcaatagctaggattttgcactaattaggaactttgttcccttggttcaggcatggagcttgtggaagaatggaaaggcagaggatctcgtggactcaattattctgcagatatattcacttaatgagtttttgctctgtatccatgtaggactgttatgcgttcaggaagacccaaatgctagaccactcatgtcatcagttgtggccatgctcgagaatgaagccacaacacttcctactcctaagcaacctgcatattttgtgccaaggaattgcatggcaggaggggcaagagaggatgccaacaagtctgtgaacagtataagtcttaccacactacaaggacgttag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0632700, RefSeq:Os04g0632700