Os04g0633200

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Revision as of 11:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0633200| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001060529.1 GI:115460787 GeneID:433711...")
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Gene Name

Os04g0633200

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001060529.1 GI:115460787 GeneID:4337118

Length

3837 bp

Definition

Oryza sativa Japonica Group Os04g0633200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32621654..32625490

Sequence Coding Region

32621654..32621956,32622042..32622189,32622275..32622512,32622613..32622970,32623410..32623588
,32623690..32623794,32624158..32625490

Expression

GEO Profiles:Os04g0633200

Genome Context

<gbrowseImage1> name=NC_008397:32621654..32625490 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32621654..32625490 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaaggaaaaaaagaatcaacagttatggaagcagcaaccaccaacattttctaccgtcccgtcatcttcttctccgtgctcctttgtttccaataccgtgccgccggcgttgcatcggacacgctcagcaatggccgcaacctcactgatggcgacacgctcgtgtcagccaatggctccttcactctggggttcttctcacccggcttgccaagcaggagatacctcgcgatatggttctccgagtcggcggacgccgtctgggtggccaaccgcgacagcccactgaacgacaccgccggcgtagtggttatcgatggcacgggcgggctcgtcctgctcgacggcgccgccggccaggccgcctggtcgtcgaacacgactggctcgtctccatcggtggcggtgcagctgctcgagtctgggaacctcgtcgtgcgcgaccagggcagcggcgacgtgctgtggcagtcgttcgacaacccgtcgaacaccctgatcgccggcatgaggctcggcaggaacccacggaccggcgccgagtggtccctcacgtcgtggcgcgcgcccgacgacccggcgacggggggctgccgccgcgtgatggacacgagagggctagcggactgcgtctcgtggtgcggcgccggcaagaagtaccgcacggggccatggaacgggctgtggttcagcggtgtcccggagatggcatcgtactcgtccatgttcgcgaaccaggtggtggtcaagcccgacgagatcgcctacgtcttcaccgccgccaccgccgcggcccccttctcccgcctcgtgctgagtgaggccggcgtgatccagcgcctcgtgtgggatcccagcagcaaggggtggaacacgttcgcgcaggcgccgcgcgacgtatgcgacgactacgccaagtgcggcgcgttcgggctgtgcaacgtgaacaccgcgtcgacgctcttctgcagctgcatggcggggttcagcccgatgttcccctcccagtggtccatgagggagacctccggtggttgccggaggaacgcgccgctggagtgcggcaacgggagcaccacggacgggttcgtgccggtgcgcggcgtgaagctccccgacacggacaacgccacggtggacacgggcgccacgcttgacgagtgcagggcgaggtgcttcgccaactgttcctgcgtcgcctacgccgccgcggacatccgaggcgccggcggcggcagcggatgcgtgatgtggacgggtgacgtcattgacgttcggtatgtcgacaaagggcaggatctctatttgaggctggcaaagcctgaactagttaacaataagaagaggactgtgataaaagttctgctcccagttacagcagcatgtttgcttctgctgatgagcatgttccttgtgtggttacgcaagtgcagaggcaaacgtcagaataaggttgtccagaaaaggatgctaggatacttgagtgcattaaatgaacttggtgatgaaaatttagaactcccgtttgtcagttttggagacattgctgctgcaacaaataatttttctgacgacaacatgctcggacaaggtggcttcggaaaggtttataagggcatgctgggtgataacaaagaagtggcaattaaaaggcttagcaagggttctggacaaggagtagaagagttcagaaatgaagttgttctaattgccaaattgcagcacaggaacctcgttaaacttcttggctgttgcatacatggagatgagaagctgctaatttatgaatacttgccaaacaaaagcttggaagctttcattttcggtactgttcaaaaacataccatgcgatccaataaacttcactccatgcttactgatagagaaattttattgttcttgaaaaagtatctcaagatacctaaattttacactaaaatttttggtaccttgagatatttagtatctgaagatcctgcaagtaagtatgctcttgattggccaacaaggtttaagataatcaaaggagtagctagaggacttctttatctccaccaagactcaaggttgacaataattcatagagatctcaaatcaagcaacatcttgttggatgtggatatgagccctaagatatctgattttggtatggcaagaatcttcggtggcaaccagcaagaagccaatactaaccgagttgttggaacatatggttacatgtctcctgaatatgcaatggatggcgccttttcagtcaagtccgacacatatagctatggtgttatactcttggagattgtaagtggtctgaagattagcttacctcggctgatggactttcccaacctattagcttatgcatggagcttatggaaggatgacaaggccatggatttggtggattcatccattgctgagagttgctcaaaaatggaagttttactatgtatccacatagggctgttgtgcgtgcaagataatccaaataataggccacccatgtcttctgttgttttcatgttagagaatgaagctgcagcgcttccagctccaatacaacctgtgtattttgcacatagggcctctggagccaaacaatcaggaggaaataccagcagctctaataataacatgagcctcacggtattagaaggacggtag</cdnaseq>

Protein Sequence

<aaseq>MQGKKESTVMEAATTNIFYRPVIFFSVLLCFQYRAAGVASDTLS NGRNLTDGDTLVSANGSFTLGFFSPGLPSRRYLAIWFSESADAVWVANRDSPLNDTAG VVVIDGTGGLVLLDGAAGQAAWSSNTTGSSPSVAVQLLESGNLVVRDQGSGDVLWQSF DNPSNTLIAGMRLGRNPRTGAEWSLTSWRAPDDPATGGCRRVMDTRGLADCVSWCGAG KKYRTGPWNGLWFSGVPEMASYSSMFANQVVVKPDEIAYVFTAATAAAPFSRLVLSEA GVIQRLVWDPSSKGWNTFAQAPRDVCDDYAKCGAFGLCNVNTASTLFCSCMAGFSPMF PSQWSMRETSGGCRRNAPLECGNGSTTDGFVPVRGVKLPDTDNATVDTGATLDECRAR CFANCSCVAYAAADIRGAGGGSGCVMWTGDVIDVRYVDKGQDLYLRLAKPELVNNKKR TVIKVLLPVTAACLLLLMSMFLVWLRKCRGKRQNKVVQKRMLGYLSALNELGDENLEL PFVSFGDIAAATNNFSDDNMLGQGGFGKVYKGMLGDNKEVAIKRLSKGSGQGVEEFRN EVVLIAKLQHRNLVKLLGCCIHGDEKLLIYEYLPNKSLEAFIFGTVQKHTMRSNKLHS MLTDREILLFLKKYLKIPKFYTKIFGTLRYLVSEDPASKYALDWPTRFKIIKGVARGL LYLHQDSRLTIIHRDLKSSNILLDVDMSPKISDFGMARIFGGNQQEANTNRVVGTYGY MSPEYAMDGAFSVKSDTYSYGVILLEIVSGLKISLPRLMDFPNLLAYAWSLWKDDKAM DLVDSSIAESCSKMEVLLCIHIGLLCVQDNPNNRPPMSSVVFMLENEAAALPAPIQPV YFAHRASGAKQSGGNTSSSNNNMSLTVLEGR</aaseq>

Gene Sequence

<dnaseqindica>3535..3837#3302..3449#2979..3216#2521..2878#1903..2081#1697..1801#1..1333#atgcaaggaaaaaaagaatcaacagttatggaagcagcaaccaccaacattttctaccgtcccgtcatcttcttctccgtgctcctttgtttccaataccgtgccgccggcgttgcatcggacacgctcagcaatggccgcaacctcactgatggcgacacgctcgtgtcagccaatggctccttcactctggggttcttctcacccggcttgccaagcaggagatacctcgcgatatggttctccgagtcggcggacgccgtctgggtggccaaccgcgacagcccactgaacgacaccgccggcgtagtggttatcgatggcacgggcgggctcgtcctgctcgacggcgccgccggccaggccgcctggtcgtcgaacacgactggctcgtctccatcggtggcggtgcagctgctcgagtctgggaacctcgtcgtgcgcgaccagggcagcggcgacgtgctgtggcagtcgttcgacaacccgtcgaacaccctgatcgccggcatgaggctcggcaggaacccacggaccggcgccgagtggtccctcacgtcgtggcgcgcgcccgacgacccggcgacggggggctgccgccgcgtgatggacacgagagggctagcggactgcgtctcgtggtgcggcgccggcaagaagtaccgcacggggccatggaacgggctgtggttcagcggtgtcccggagatggcatcgtactcgtccatgttcgcgaaccaggtggtggtcaagcccgacgagatcgcctacgtcttcaccgccgccaccgccgcggcccccttctcccgcctcgtgctgagtgaggccggcgtgatccagcgcctcgtgtgggatcccagcagcaaggggtggaacacgttcgcgcaggcgccgcgcgacgtatgcgacgactacgccaagtgcggcgcgttcgggctgtgcaacgtgaacaccgcgtcgacgctcttctgcagctgcatggcggggttcagcccgatgttcccctcccagtggtccatgagggagacctccggtggttgccggaggaacgcgccgctggagtgcggcaacgggagcaccacggacgggttcgtgccggtgcgcggcgtgaagctccccgacacggacaacgccacggtggacacgggcgccacgcttgacgagtgcagggcgaggtgcttcgccaactgttcctgcgtcgcctacgccgccgcggacatccgaggcgccggcggcggcagcggatgcgtgatgtggacgggtgacgtcattgacgttcggtatgtcgacaaagggcaggatctctatttgaggctggcaaagcctgaactaggtacaacactgaaactaatgtgttcgagctaatgtgttcttgaggaggtaccataaggtaccactttttctattgtaaatttggtaccttttggtaactaggtactataaggtaccaaattttacactaaatttttgatacctcatgataccttcttaaggaccgtagaattgctcaatgtgtttggcaatggttaattacatatatatttccttcgctgtaaaatatcctagtactcggttaaacatcgcctagtactcgattagagtctataatatttgtgatgtctgattgagtactacgttactatattttagcgtggaggaagtactaattattttggtgaaatatttcttttcgcagttaacaataagaagaggactgtgataaaagttctgctcccagttacagcagcatgtttgcttctgctgatgagcatgttccttgtgtggttacgcaagtgcagaggtagataccgagccacctcacttctcagttctcacagcttatctaattaagaataatactactattaatattaaaatacacgatattgatattcctgtcaggcaaacgtcagaataaggttgtccagaaaaggatgctaggatacttgagtgcattaaatgaacttggtgatgaaaatttagaactcccgtttgtcagttttggagacattgctgctgcaacaaataatttttctgacgacaacatgctcggacaaggtggcttcggaaaggtttataaggtagcccacaaaaactgtattgaaaactacagtaggacaaaactatcgcacaatattcttcaattttagagcatattttttaggagtattacagaagaagtgccacaattagtactccctccgtccaaaaatataagagattttgggtgtcacatctacccaaaatcccttataccataggacggagggagtagtttactactgaaaagtgaaaacagtgataccatatgaaaatcccaattatggatgatgaactttatttttaaaaaagggagaaccgacaagaaacatggtgttaaataattaagaagaatgtgtgagcgtgttaagaatcgaataaggaaccttggggtcgaaaccacgtcccttatattgcggtaaaaagtgcatctcgagatgaactttcttaataaaaaaattaattgattaaattgtgtagggcatgctgggtgataacaaagaagtggcaattaaaaggcttagcaagggttctggacaaggagtagaagagttcagaaatgaagttgttctaattgccaaattgcagcacaggaacctcgttaaacttcttggctgttgcatacatggagatgagaagctgctaatttatgaatacttgccaaacaaaagcttggaagctttcattttcggtactgttcaaaaacataccatgcgatccaataaacttcactccatgcttactgatagagaaattttattgttcttgaaaaagtatctcaagatacctaaattttacactaaaatttttggtaccttgagatatttagtatctgaaggtaccaaaatttacaataaacaatgtgatacttaccagtactttctcaaagatgataaaattatccttactataagaacattgtataccattcttgatagatcctgcaagtaagtatgctcttgattggccaacaaggtttaagataatcaaaggagtagctagaggacttctttatctccaccaagactcaaggttgacaataattcatagagatctcaaatcaagcaacatcttgttggatgtggatatgagccctaagatatctgattttggtatggcaagaatcttcggtggcaaccagcaagaagccaatactaaccgagttgttggaacatagtgagtgatccaggaatttgttttttactattacattgatttcctgaaaaatcctttgttacttattactaaaactgttaagcagtggttacatgtctcctgaatatgcaatggatggcgccttttcagtcaagtccgacacatatagctatggtgttatactcttggagattgtaagtggtctgaagattagcttacctcggctgatggactttcccaacctattagcttatgtaagtaccatggaatgctctatgtccataaaaattcaaaataactataccgcttttatatggactgatctatttcactgtttaggcatggagcttatggaaggatgacaaggccatggatttggtggattcatccattgctgagagttgctcaaaaatggaagttttactatgtatccacatagggctgttgtgcgtgcaagataatccaaataataggccacccatgtcttctgttgttttcatgttagagaatgaagctgcagcgcttccagctccaatacaacctgtgtattttgcacatagggcctctggagccaaacaatcaggaggaaataccagcagctctaataataacatgagcctcacggtattagaaggacggtag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0633200, RefSeq:Os04g0633200