Os04g0633900

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Revision as of 11:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0633900| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001060532.2 GI:297603409 GeneID:433712...")
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Gene Name

Os04g0633900

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001060532.2 GI:297603409 GeneID:4337121

Length

4080 bp

Definition

Oryza sativa Japonica Group Os04g0633900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32647488..32651567

Sequence Coding Region

32647488..32647790,32648374..32648531,32648681..32648897,32649021..32649181,32649932..32650072
,32650244..32651567

Expression

GEO Profiles:Os04g0633900

Genome Context

<gbrowseImage1> name=NC_008397:32647488..32651567 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32647488..32651567 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctcaatgttcctaatcatcctatcatgcatgcttctcctttctaattctggcagaacaactacaggtgcagagctaggtgacactcttggcaagggccggaacatcaccgacggcgagaggctcgtctccgccggcggctcattcacgctgggcttcttctcgccggcgtcgtcttcgtcgtcgagcaccagccggagatacctcgggatatggttctccgtctccgacgacgtcgtctgctgggtcgccaaccgcgaccgccctctcacggacacctccggcgtgctggtgatcaccgacgcggggagcctcctcttgctcgatggctctggccacgtcgtgtggtcgtcgaacacgacgaccgggggcggcgcgtccatggcggcgcagctgctcgagtcgggaaacctcgtcgtcagtgaccgcggcaatggcggcgcgggcgctgtcgtcgtgtggcagtcgttcgaccacccgtgtgacacgctgctccccggcatgaagatcggcaagaacctgtggaccggcgccgagtggtacctctcgtcgtggcgttcgtccggcgacccgtcgccggggaactaccggtacaggacggacacgaagggcgtgccggagaacgtgctctgggacggcgacggcgaggtgtaccggacggggccgtggaacgggctgtggttcagcggcatcccggagatggggacgtactccgacatgttcagctaccagctgacggtgagccccggcgagatcaccttcggctactccgccaacgccggcgcgccgttctcccgcctcgtggtgacgggcgtcggcgaggtccagcggctggtgtgggagccgagcagccgggcatggaagaacttcttccaggggccgagggacctgtgcgacgactacggcaagtgcggggcgttcggcctgtgcgacgccggcgcggcgtcgacgtcgttctgcagctgcgtggagggcttcaccccggcgtcgccgtcgccgtggaagaagatgagggacacctccgccgggtgccggcgagacgcggcgctgggctgcgccacggacggcttcctgacggtgcgcggcgtgaagctccccgacgcgcataacgcgacggtggacaagcgcgtcacggtggaggagtgctgggcgcggtgcctcgccaactgctcgtgcgtcgcctacgcccccgccgacatcggaggcggcggcggctgcggcgccgggagcggatgcatcatctgggccgacgacctcgtcgacctgcgctacgtcgatggaggacaagatctctacgtgaggttggcgaaatctgagttaggcaaagatggtattcggcaacggcggcctccagctgctgtggttattggtgcatccattgcttcagttgttggggttcttctcattattttgttggtcctcctatatgtgattaggaggcgtcagaggcctagagtatcagatgatgatgcgggcgttccagctgctactgctgctgttcatgctcgtcctaatcctgctttggctgccccttcaattaatctgtctagtgtgaaggaggctacagggaatttctctgaaagcaatatcattggcagaggtggtttcggcattgtctatcaggggaagctgcccagtggtagaaaggttgctgtaaagaggctcacacagtctcttgttactgacaaacgcaaggaggatttcataagagaggtggagatgatgtcgaacacaaggcacgcctaccttgttgagctgctctgttactgccaagaaggaggcgagatgatactagtctatgaatacatggagaacatgagcttggatctctacatatttggagaagatcgtagactgcgagcctctctgaattgggtgcaaagattagacataatccgcgggatcgccataggtgtcgagtaccttcacaacgtgaaagttattcacagggatctgaaaccatccaacatactcctagatgacaatcggagacctaagacctgggagtcttggaaacagcatgagatcgaggacattcttgatttaggactgatcaaacctgagcctgatctcctgcttgggctagacaggtgcatccaaattgggcttctctgcgtacagcaatctcccgatgacaggcctaccatgaatcaggttgtctcaatgctaaccaaatacagttcacagatagccatgcccaagaatcccatgatcaacagcagatgcgagccttcagtttcacaagtagtatctgacacagagccggcctcacacgacagacctgggccgagcctgaactga</cdnaseq>

Protein Sequence

<aaseq>MSSMFLIILSCMLLLSNSGRTTTGAELGDTLGKGRNITDGERLV SAGGSFTLGFFSPASSSSSSTSRRYLGIWFSVSDDVVCWVANRDRPLTDTSGVLVITD AGSLLLLDGSGHVVWSSNTTTGGGASMAAQLLESGNLVVSDRGNGGAGAVVVWQSFDH PCDTLLPGMKIGKNLWTGAEWYLSSWRSSGDPSPGNYRYRTDTKGVPENVLWDGDGEV YRTGPWNGLWFSGIPEMGTYSDMFSYQLTVSPGEITFGYSANAGAPFSRLVVTGVGEV QRLVWEPSSRAWKNFFQGPRDLCDDYGKCGAFGLCDAGAASTSFCSCVEGFTPASPSP WKKMRDTSAGCRRDAALGCATDGFLTVRGVKLPDAHNATVDKRVTVEECWARCLANCS CVAYAPADIGGGGGCGAGSGCIIWADDLVDLRYVDGGQDLYVRLAKSELGKDGIRQRR PPAAVVIGASIASVVGVLLIILLVLLYVIRRRQRPRVSDDDAGVPAATAAVHARPNPA LAAPSINLSSVKEATGNFSESNIIGRGGFGIVYQGKLPSGRKVAVKRLTQSLVTDKRK EDFIREVEMMSNTRHAYLVELLCYCQEGGEMILVYEYMENMSLDLYIFGEDRRLRASL NWVQRLDIIRGIAIGVEYLHNVKVIHRDLKPSNILLDDNRRPKTWESWKQHEIEDILD LGLIKPEPDLLLGLDRCIQIGLLCVQQSPDDRPTMNQVVSMLTKYSSQIAMPKNPMIN SRCEPSVSQVVSDTEPASHDRPGPSLN</aaseq>

Gene Sequence

<dnaseqindica>3778..4080#3037..3194#2671..2887#2387..2547#1496..1636#1..1324#atgagctcaatgttcctaatcatcctatcatgcatgcttctcctttctaattctggcagaacaactacaggtgcagagctaggtgacactcttggcaagggccggaacatcaccgacggcgagaggctcgtctccgccggcggctcattcacgctgggcttcttctcgccggcgtcgtcttcgtcgtcgagcaccagccggagatacctcgggatatggttctccgtctccgacgacgtcgtctgctgggtcgccaaccgcgaccgccctctcacggacacctccggcgtgctggtgatcaccgacgcggggagcctcctcttgctcgatggctctggccacgtcgtgtggtcgtcgaacacgacgaccgggggcggcgcgtccatggcggcgcagctgctcgagtcgggaaacctcgtcgtcagtgaccgcggcaatggcggcgcgggcgctgtcgtcgtgtggcagtcgttcgaccacccgtgtgacacgctgctccccggcatgaagatcggcaagaacctgtggaccggcgccgagtggtacctctcgtcgtggcgttcgtccggcgacccgtcgccggggaactaccggtacaggacggacacgaagggcgtgccggagaacgtgctctgggacggcgacggcgaggtgtaccggacggggccgtggaacgggctgtggttcagcggcatcccggagatggggacgtactccgacatgttcagctaccagctgacggtgagccccggcgagatcaccttcggctactccgccaacgccggcgcgccgttctcccgcctcgtggtgacgggcgtcggcgaggtccagcggctggtgtgggagccgagcagccgggcatggaagaacttcttccaggggccgagggacctgtgcgacgactacggcaagtgcggggcgttcggcctgtgcgacgccggcgcggcgtcgacgtcgttctgcagctgcgtggagggcttcaccccggcgtcgccgtcgccgtggaagaagatgagggacacctccgccgggtgccggcgagacgcggcgctgggctgcgccacggacggcttcctgacggtgcgcggcgtgaagctccccgacgcgcataacgcgacggtggacaagcgcgtcacggtggaggagtgctgggcgcggtgcctcgccaactgctcgtgcgtcgcctacgcccccgccgacatcggaggcggcggcggctgcggcgccgggagcggatgcatcatctgggccgacgacctcgtcgacctgcgctacgtcgatggaggacaagatctctacgtgaggttggcgaaatctgagttaggtacgaagcaggtagcaatgtattttttttacgaaattgctaaaaaaaactgtcgcatgttttttggtaaaaactttcaaaatgagcaaatctaataagatttgacaaggctaatgctgatgaaatgagtgagagtgagtgctgatatatttgtggaaaaaactgtgacaggcaaagatggtattcggcaacggcggcctccagctgctgtggttattggtgcatccattgcttcagttgttggggttcttctcattattttgttggtcctcctatatgtgattaggaggcgtcagaggcctagagtatcaggtaacaattcgtaatactctgaaagtctgaattcctgataactattttgttcagtttactgggattttttttgccccttgagatgatgacccatcgtttctcccacgtcaactgaatagtcatgaaaaaaattgataagatagattaacatatgatatattgctccatgagacaaattaaacttctacaaattataaaaaaaaaacttctaatgtatgaatactttaatttgttgttttctacaatttgtagaggttaaaatttaactttacatgtactattttttatattttttcataactatttagtcgacgtgcacaaacgagaatttgactttatatgtaatatattttatagttcttttgtttttttaataactatttgacgatgtgctacaaacgggaggcgtctagagaggagaaaatcatccccatagttttctactccctccgtttcaggttataagtcgttctgactttggttaaagttaaattattttaagtttaactaagtttgtagttaaatatagtaatatttataacaccaaattagtttcatcaaatatataattgaacatattttcataatgtatttgttttgagttaaaaatgttactacttttttttctacaaacttaattaaacttgaaatagtttgacttttaccaaaaacaaaacgatttataatatgaaacgaagggagtgctttgatatacaagaaggtgtaaatcaatgcaattatattcaccagatgatgatgcgggcgttccagctgctactgctgctgttcatgctcgtcctaatcctgctttggctgccccttcaattaatctgtctagtgtgaaggaggctacagggaatttctctgaaagcaatatcattggcagaggtggtttcggcattgtctatcaggtctgcacttttttcaacaatttgacacctttatgtacgcaaactaagttacgatttgacttcactaccacaaatcttgaaatgcaaagtctgcattgaaacatctgattttacaatcaccaggggaagctgcccagtggtagaaaggttgctgtaaagaggctcacacagtctcttgttactgacaaacgcaaggaggatttcataagagaggtggagatgatgtcgaacacaaggcacgcctaccttgttgagctgctctgttactgccaagaaggaggcgagatgatactagtctatgaatacatggagaacatgagcttggatctctacatatttggtacccattcctaaccaaaaaaacaaattcattactcactgtagtctgttaatctttgtagaaatgtgatgcataattatcttctgtatattcctgtaaagctctgatcttctgcatgcttatcacacgggcctatttggaactgacaggagaagatcgtagactgcgagcctctctgaattgggtgcaaagattagacataatccgcgggatcgccataggtgtcgagtaccttcacaacgtgaaagttattcacagggatctgaaaccatccaacatactcctagatgacaatcggagacctaaggtagcagactttggcactgccaagctgtttatcaacgaccagactgatccaacattagttctgtcagcgtatgatttttaacttcattacttcagctaatgttcctattcaagtttttctggcattttctgcatgttttccttagaggtctcaactgaccgacaagcttttttttttttgttaatgaaggggctacatagctccagaatatgcagctcaaggaaatctgacgctcaagtgcgatgtgtatagctttggagttgtgttgctagagataatcagtggtaaaaggaacaggacattaccaacttttcttcgtgaggtaagtgaacatataagtcgcacaattgatttgcctaaagcaaataagcacataaacagaagttgagaagccagtgccaacagactgaactaagcacccgcaaaaaaatgacataaaagttcataattttcagtactactcttttagaaaaaaaataatgaatttccaggcaaagttaataattttttgaaaggaaaaatatagctattagaaaatgcaaatgggcactatcatgtaagtgagtttttttctttttggcagacctgggagtcttggaaacagcatgagatcgaggacattcttgatttaggactgatcaaacctgagcctgatctcctgcttgggctagacaggtgcatccaaattgggcttctctgcgtacagcaatctcccgatgacaggcctaccatgaatcaggttgtctcaatgctaaccaaatacagttcacagatagccatgcccaagaatcccatgatcaacagcagatgcgagccttcagtttcacaagtagtatctgacacagagccggcctcacacgacagacctgggccgagcctgaactga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0633900, RefSeq:Os04g0633900