Os04g0636600

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Revision as of 11:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0636600| Description = Conserved hypothetical protein| Version = NM_001060554.1 GI:115460837 GeneID:4337144| Length = 7786 bp| Definition ...")
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Gene Name

Os04g0636600

Description

Conserved hypothetical protein

Version

NM_001060554.1 GI:115460837 GeneID:4337144

Length

7786 bp

Definition

Oryza sativa Japonica Group Os04g0636600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32769007..32776792

Sequence Coding Region

32769345..32769575,32770006..32770107,32770360..32770539,32770652..32770729,32772130..32772249
,32772342..32772434,32772998..32773072,32773302..32773457,32773586..32773669
,32774402..32775079,32776443..32776506,32776597..32776607

Expression

GEO Profiles:Os04g0636600

Genome Context

<gbrowseImage1> name=NC_008397:32769007..32776792 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32769007..32776792 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgcgccggtgcgtgcgggatctgtacccgctgcggcctcttaggaggatccctaggccgatctccagcgaggtcccaagtccagcatttcttcgacccagaagcaagtcgacaaaagcttcccaacagagttcaacacagaatactgtccctggccctcaaggagaaccttctcagtcaggaagcaatgttccgaaagttctgcttggaactctgatggtcggcgctgctgctatggctgcttatcaagctggctacatagacgatcaatttaaggatataatatttccctctacaatgaaggaaaaaaatatcagaaagatatacgatgatctgaaggctccttctgaacaaaaagttgatgagaagcaagtagtatcagatccaaatgttgacattgttcagaacagtaacaacgaggctcatcctcaaaaggaccttccaactgaagggatgggtccaccagaaattccaaccactgatgagcagactgtttcctctgaagaaaaggaaaaagaaacccttgcccaggggacaccgcaaattccagatgaacatggagctgctgctaaaccactgtcccaagatattcctgttattgacataaatccaagtgttgatgataaggcaacaggagaagttcttcctgaacaaactgacaagacaaccacttcagtttctccggtacaatcgagcctagcaacagcaggtccttcccatcatgtacacacagatacagatggaccaaaggatccatcaagcgctggtgcagttgaacataaatctctggctgagacatatttactacaagaacctgataattctaaagacatgggtgctaaggaaagtaaacacgatggtgttattagtacgggaacttctgatgatgggaaaattgtacttgatatcatagaggctattcatgctgctgaaagaaagcaggcagatgcagatgcttacatgtattcagaagagaaaaggaagttgaaggagaaatatgaaaaggagctgaaggcaccagggctcgggagctcatgtatgctgaaaagcagcaattctggcaaggagctgaagaaagagaaattgaagtcagctgctgtgattaaggaactgcaagaaaatgctgaacaaaagctaagggatgagctgcagcagaaggatgaggaaacaagtcaacaagttgagaaggttcgcgagttagcaaaggctgagcttgctgcagctcttgcaaaagagagagcatcccagatcgaacagattgctgaagcaaatctcaatatagatgctttgtgcatggcgttttatgcacgatctgaagaaactcggcagagtcattcggttcataagcttgctctgggtactcttgctttggaagatgctctatccactggatcaccaatccggacagaggtggatcaattgcgcaaatctcttgaaggtattgataaggactcactgttagaattggctctttcatcaattccagaagatgttctcgagtacggatcagatacccctatggatttgaaacaaaagtttaattccttgaaggaaacagtcaggcatttcagccttataccagcgggtggtgttggtatgctgactcatgctgttgctcatgtggcttcatccattaagatcaaagaggaccaatctggagacggaattgagtctcttctaaacagagtggagaacttgattatacatggagacttgagtgcagcagcggaggccttggaaagagggttacaagggagtgaagcagcagaaatagctagcgagtgggtgaagcaggcaaggaaacgtgcaatagcagagcagacgcttactctcctccattcttatgcttcttccatcacattctcgtga</cdnaseq>

Protein Sequence

<aaseq>MLRRCVRDLYPLRPLRRIPRPISSEVPSPAFLRPRSKSTKASQQ SSTQNTVPGPQGEPSQSGSNVPKVLLGTLMVGAAAMAAYQAGYIDDQFKDIIFPSTMK EKNIRKIYDDLKAPSEQKVDEKQVVSDPNVDIVQNSNNEAHPQKDLPTEGMGPPEIPT TDEQTVSSEEKEKETLAQGTPQIPDEHGAAAKPLSQDIPVIDINPSVDDKATGEVLPE QTDKTTTSVSPVQSSLATAGPSHHVHTDTDGPKDPSSAGAVEHKSLAETYLLQEPDNS KDMGAKESKHDGVISTGTSDDGKIVLDIIEAIHAAERKQADADAYMYSEEKRKLKEKY EKELKAPGLGSSCMLKSSNSGKELKKEKLKSAAVIKELQENAEQKLRDELQQKDEETS QQVEKVRELAKAELAAALAKERASQIEQIAEANLNIDALCMAFYARSEETRQSHSVHK LALGTLALEDALSTGSPIRTEVDQLRKSLEGIDKDSLLELALSSIPEDVLEYGSDTPM DLKQKFNSLKETVRHFSLIPAGGVGMLTHAVAHVASSIKIKEDQSGDGIESLLNRVEN LIIHGDLSAAAEALERGLQGSEAAEIASEWVKQARKRAIAEQTLTLLHSYASSITFS</aaseq>

Gene Sequence

<dnaseqindica>7218..7448#6686..6787#6254..6433#6064..6141#4544..4663#4359..4451#3721..3795#3336..3491#3124..3207#1714..2391#287..350#186..196#attcgcgaagccgcacaacacaacgcaacgccgcgcttccgcctctccacccgccgccgcctccctcgccggcttgccgccgccgccgcggtcgcgaggcggagaccttgcgggacgatcggagcgacgtccctctacacccctccccctccgcagcggcgagaagaacaagggggccgcccgccatgctgcgccggtaagggcacacccacaccctgtagatgtttgtcccatccgagttagggtttcctggcctaatgctcgttcctccccgcctctattgcaggtgcgtgcgggatctgtacccgctgcggcctcttaggaggatccctaggccgatctccagcgaggttagcatttccgtttccgtttgtttgcggtcgatcaagttgtttgttctgtgaggcgcttgctgtgtaggcaaatcggtagttttctgagggagctttacttggggcactcttgaattggcatgcttactcattaaattgatggaatgtgtactgatgcgcgaatagatagaaaatgctgctaatgtttacagttgtattaacataggaccttagtgtctctgtgtttttgatatgggcctagcaaatcaaggactatttggagcataatgctgttacattgaaccagtgttttctgcttgatttgtctaagttttatgatgatattggggacctaaggtaataaccagtatctatttgtatctgcatagctgctatgcgaattttgtaccagttttacacattgtaggtattacgtatttaatgttgtggaacatcacatgaactaaggaattgttgtgtgcgattttcttttatctatattagattgatcaattgactagtgcaatcaaatggccctcctagagtatagaaagcttgatttatttattgattaaaaaaaacttctgctgtgattctgtgaaactttctagttgatgcgagacacagttctgcagtagttgttccgactataataatgtttggaaggcagttgtttggattcaaagaatttaacttgatgtggtaccaataagataaacaaaatccacttagactgcccttgcttgaactatgatatttgtaacttgatttaatatttttctttatttagctgtatatgcagtttgtttacttctctgtgtaaaatgctgattatcacataaagaagcgaaaaacacagaaaagtccatggtgaattcttgtatcggaaaaaaaataaccatactatcttctcatgataatatgtaatgctacttattctgctgggagcagtattgacgcaaggacaacctcaggctcagttgatgacctgtcaaactctgtgcatctccatctttttcttgtgctcactccattttgtacacacaaatgcagtcatttttcatgtgcattgaatgcacaattcgatagcagattactagatttggtaatgtgtttgcaatctgttgcttcttgtctatcccattcgtgatgcttttgcaatatgttgtttcttttcaatcccattcataatgcttttgtgatatactgtaatgtttcttgttgaatgttgatcccattaatgaggtatagaaaaaacacaaaagtctctacggaaaagaggctacttatgatttcttctgtctgttactgtcataaaccactttcttcttacatagtattttttgggggcctataaatgacacacatacctttttaacaggtcccaagtccagcatttcttcgacccagaagcaagtcgacaaaagcttcccaacagagttcaacacagaatactgtccctggccctcaaggagaaccttctcagtcaggaagcaatgttccgaaagttctgcttggaactctgatggtcggcgctgctgctatggctgcttatcaagctggctacatagacgatcaatttaaggatataatatttccctctacaatgaaggaaaaaaatatcagaaagatatacgatgatctgaaggctccttctgaacaaaaagttgatgagaagcaagtagtatcagatccaaatgttgacattgttcagaacagtaacaacgaggctcatcctcaaaaggaccttccaactgaagggatgggtccaccagaaattccaaccactgatgagcagactgtttcctctgaagaaaaggaaaaagaaacccttgcccaggggacaccgcaaattccagatgaacatggagctgctgctaaaccactgtcccaagatattcctgttattgacataaatccaagtgttgatgataaggcaacaggagaagttcttcctgaacaaactgacaagacaaccacttcagtttctccggtacaatcgagcctagcaacagcaggtccttcccatcatgtacacacagatacagatggaccaaaggtttgaacttcagtgatcttctctattattattatttttgtggggaaaacttatgtctacttgctatatgcccatccttaccatcatatttattttgattggtcgactgcaacatcttctattttttaactttccattttggcaactgcatgacttttgtgggttgaaggatgattaataacttcttttgcgtataaggattctatactctggagcgatggtttacaaatgaaactacttgtcttataatatatattttttgagcaatcaatggaaggctgagtcagtccacatgagttatgttaaacttaaagtcaatattggattacatcaaatggaggacagatgggggacggggaggaggcgtttgactgctaagttaacatgaatgaaggacttatactggagtaggactgactcaattggaatctccttttggacttgagagatcctttagaatgtaaaatttgaaatgaattcctatggtgcttcatttaaaacaaatttgtgttgttatggactacacaatatgcagatcaaatggcacaatcggttggtgccaatctatgttttagttcttatgattactctttagcaacacccccaccaatatgtgcatttagcatcatcttgccaaagtcttatgctttcatattatttgatgatgcagtttctgaatactgaataatgacactggcacaacaatctcatcgaactaatcgttgtctgcaggatccatcaagcgctggtgcagttgaacataaatctctggctgagacatatttactacaagaacctgataattctaaagacatggtacgctctcctctttagtcattgttgtggtactaatatcgatgaaatactttctaattacaaggttgatagaaataatttaatggtaccttttcaatgttaatatatctgatgttttctgttatcagggtgctaaggaaagtaaacacgatggtgttattagtacgggaacttctgatgatgggaaaattgtacttgatatcatagaggctattcatgctgctgaaagaaagcaggcagatgcagatgcttacatgtattcagaagagaaaaggaagttgaaggtttgctttcgatttcatattatgactgcttcgttatttactgcattgagtttcaacactagcatgcctttgtgatttacagtattatgttccctcttttcttctgttgaactgatgttttgtggatttgtagcagttccaaatttgacaaatgacgtttataattgattcttttgattttatactattacattttataatggtcagtactctgcttatgttttctcaggagaaatatgaaaaggagctgaaggcaccagggctcgggagctcatgtatgctgaaaagcagcaattctggcaaggtctgtgacattttatatttattatcgctagtctctttgatcatgtttccataaacattgtattctgctggatgcgaacaatgtttctcaccgaaaaaagacctgctcagctatataaatatacacagcttgacgcatacctatatctcaagatttaggtcctttttacttttcatcctctatctttaagactttgaccataggttttttaataataatatcatgaaaaaaattacataaatattcagatgccatgtggctaatatacatatatggagttttaaagttcgaagtgtttgactgcacgaataccatgacaacctacatttggagagggaaggaggagttaaaccttttcattttttctgtggatatgtaatttaaatttacacaaaaagcaaaatttttttgctctatatgccttcgcttcacttcactagacctgtatataatctctctttcctatagaatgcagatcgtgtctcttgtttatattttaatttcagattgattatttttttgtggtggttttaatcttcttttctccttttgttttgttttaggagctgaagaaagagaaattgaagtcagctgctgtgattaaggaactgcaagaaaatgctgaacaaaagctaagggatgagctgcagcagaaggtctgtcagatttgttttctatctgctataaactctctgccctctttatgctaatcattacatagttgacattggtatggctaatgtaacaggatgaggaaacaagtcaacaagttgagaaggttcgcgagttagcaaaggctgagcttgctgcagctcttgcaaaagagagagcatcccagatcgaacagattgctgaagcaaatctcaatgtatggacttttgctatcttttattttattgcaggcaatgttctaattggctattagatattaatgcatgctgtgaccccatgtttaagcactcacctaggtagcagccttgatagcctaaaatattggtgcagatttatatttgcagctggtgggttaccttggatgacttgctctccttcttttgtgggtggttaggccaggaaagacagatgatttagtgtgcacatgtttagtggtaatgattagaacactgagggcaaaggataatgttatatatttccttttgcaattgaaaccaccataattccctcttcatagtaaattaacttacttttttagaagttcttcctcatgatctctgtgttcatagcgtgataaaccttatgggtgtgttcacatattttttttttactgtgttcctctgtaagctatctggttgtgcctattaggttggcttgcttataatttgtgatgttgcaatacactaaagcataatacattaaaaattagtgtcttagcatgtcttagcatgctaagataaaccttatgaatgtgttcacatattttttttttactgtgttcctctctaagctgtctggttgtgcctatactgattaggttggctcgctgataattttttatgttgcaatacactaaggcataatacattaaaaaaatagtatctactccctccgtcccaatataagtgcgcctaggtttggatgcctgtccatattcgttgtactatgaaatgtcacatccggtcctaggtgcacttaaattgggacggagggagtacatgatatcctgaaaattttctcatcagatcgtacaattaaatacggattttgacattcaaatatcttcttgaggttatatggttatatctatctcaaattctcatgattattcgtccagacaacattaggctctgacagtatgctgtatttactatctatttgtcttgcagccataactctacactctatattgtgctaacatattgaacgtatggaattactgtttgttctatcgatatgaaaatcgctcatcaaactcctcatatcatgcaactctacactctatattgtgctaacatattgaactagaaccaatgatagcacgcaaatttcatctattggggtcctatgccttatatgttacacctttcaattctgcttttattagtcagtttttccctaaatattgaccattaagcataattttatattaattggtctagtttctcctggtgaagcaatatgacatagtgaactctcttatcctatctcctgatatgtctttcattgctagaacaacaatttgtgcaatacatggaagttcagattgcttgtatttttttaatttcgctttttttctttttgcatatttttcagatagatgctttgtgcatggcgttttatgcacgatctgaagaaactcggcagagtcattcggttcataagcttgctctggtaagatcctcactttgatgccatccaagtatttcaagcttagttatcatctcacttttttctttcaggcttcctaagttcatgtcaactgaacgtgtaactcttcttgcagggtactcttgctttggaagatgctctatccactggatcaccaatccggacagaggtggatcaattgcgcaaatctcttgaaggtattgataaggactcactgttagaattggctctttcatcaattccagaagatgttctcgagtacggatcagatacccctatggatttgaaacaaaaggtaagttccttgtgttgcaataaatgattacagctcatagccttattacttagtgtgccacaccgctcgacattattaattcatcattgtgtgagaattctaatgatgcctccaccttcttgcttgttttgctcctaaatacctgctccaaatattaactgttgttaatcatgaatgctcgctgagaaaaactggcttggctacccaataattagtccagaataaatgatatatcattatttcttgttgcagtttaattccttgaaggaaacagtcaggcatttcagccttataccagcgggtggtgttggtatgctgactcatgctgttgctcatgtggcttcatccattaaggtgaaaataaattgacgttgttttcttactgatcatcaattagcttttttatattgatgtgactgaaatattttgtgtgctggttctgaattttctggtcaactacctattagtagtgtctattccaggcattgtatttccttaccacttttgacttgtagtggccctatttgccctaggggatctttaccagctttgatttgagcacttttttttagatttccctattgcattgttgcctgacactgaaccgtccattgaatagaataagtttcttcagctagctggctatcaagcttccgttttcttgttcttaatttgtttggcagtcaagtgatctcaaaaattccctcttgcatgataaacactaacagtggtctgtcatataacatcaaactggatttctaaattttgtgtaaatggttttcagatcaaagaggaccaatctggagacggaattgagtctcttctaaacagagtggagaacttgattatacatggagacttgagtgcagcagcggaggccttggaaagagggttacaagggagtgaagcagcagaaatagctagcgagtgggtgaagcaggcaaggaaacgtgcaatagcagagcagacgcttactctcctccattcttatgcttcttccatcacattctcgtgattttgttcatcaatgtagtattcaacaagatctgcgagttacagacttacgttactcagtccaatcacaaatatcttaagaccatattgcaaatacctgaatatataggagccagagccattcctgtcaggcggctgctgaactttcctccttttaacagagctaataatttttggcatgtagctacaagctacttggcattcttgatgttttagtcgccagttgaggcacaatttggatagaattgccgattttgctgcggatgtaaattttcttctgtacaatgatgatgattttcgggggtcgagtttatgaaatcagaaatcctgatgctggct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0636600, RefSeq:Os04g0636600