Os10g0138000

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Revision as of 08:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0138000| Description = Cyclin-like F-box domain containing protein| Version = NM_001070667.1 GI:115481077 GeneID:4348071| Length = 4102 bp|...")
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Gene Name

Os10g0138000

Description

Cyclin-like F-box domain containing protein

Version

NM_001070667.1 GI:115481077 GeneID:4348071

Length

4102 bp

Definition

Oryza sativa Japonica Group Os10g0138000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:2329413..2333514

Sequence Coding Region

2329413..2330419,2331382..2331537,2332363..2332897,2333026..2333514

Expression

GEO Profiles:Os10g0138000

Genome Context

<gbrowseImage1> name=NC_008403:2329413..2333514 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:2329413..2333514 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcgccgccgacgccgccgccgccgcgccgcgccgtcgccgacgtcggcgctggacggggacgacatcctgcgcgagatcctcgtccgcctcccgacctcgccgtcctccctcccgcgcgcctccctcgtctgcaagcagtggcgccgcgtcgtctccgacccggccttcctccgccgctaccgcgcccaccacggcgagcccctcctcctcggcttcttcgccgaccactgcggctacccagtcttccgctccatccacgacgcccccgaccgcatcccgcccgagcacttcctcatgccgcgcgacaagggcgccgggcgatgcaactgggacgtcctcggctgccgccatggccgcgtcctcgtctacaaccggacgcggaacgagatcaccgtgtgggaccctgccaccggccaccgcagctgcgcggccgccccgccggagctcggcgacgacaaggagaagatcgtcttcaacggcgccgccgacgtatggggcgatctcatcacattagagtgtcctcctgtgtatgatacatgcttgcccagcaccctcattggatattcgctctactggttgttcagtggcgaggaggagggcatactggagtttgatctgggtaggcagagtctagctacaatcgagatgccatctgaatttctgcattataattcgcatcgcagcttccagattatgccggcagaggatggtggtatttgccttgccattctgtcataccagatcatggaattgtgggagaggaagatcagctctgatggtgtcggtgtcgccgaatggacgatgctgaagaagattgaattgggcgtgatcctagggctcggccatatggggggatggcaaaatttaatagtggcatatgatgaagactatcagcttatttttgtaaggacgatcaatggtgtcttcatgatccaccttgagtcaatgcagttcaagaatcttggaaaagacaacttcgacggcatccttcatgcatacagtgctttctgcaccgcagtgggtgatttgccaagagccgagagaagagttggtaccatctccgaaattatgggatttgatgaggatgacagcaactcagcagatcctccgaagggagcaggaacagtagaaggcaatgctgccgcaccctcatgtgaaactatacctgatgaaggaatggtagataatgaaaacctggactatgtttggaatcatggagaaagaattggtgaaggatttaaatgcaagtactgtaaaatgaccaggaaaagtggccgtgggacgcggctaaaggagcatcttgcagggaggcgtcacaatgtcattgcctgctcaggagtgccaccaaaagttaggaaagctatgaggatttctttgaacaaagtaaaacaaaggacaaaagcagcgaagaaccgtcgagcaaaaatgaagaaaccaaacacgcaaaacatggttcgtcatggtgtccacaataacagtaaggaacaacaaatgcaaatggcaaagcaattgtcattagaggaatttcactatcggcagaaaatggagaagagaggcagcacatttgagtatggtggtggaagtgacagcagaagtgctccagatgcctgctgtaacgtcgcaggcagctgtgtaggtggaggtgtcgtattgccacaaccatccagcaaaacaaggctcaaacttcatggcatggatgcagatgatgtgtaccgtggggcatcggcacaaactgaaattggcacatcagaactaagaaaagcttgggcagaatggtttcacaacaatggtattcctggaataaaagcagattgcccatatttccgtcgtgccatggagctgacacaacagcttggtttcaatgtggctgttcctactggtgccgaaatagatggcgcttatcttgatgccgatgaagaagaaataaatgttgatgccatcaatgctgaaaagtcatgtgaagcagttcttgatatgcccttgatcacatggaccaagaaacacattggcaagaaccacaaagccaataagaaatatcatgaaatggctaatacactaactcaagatcttggatcacctggaagcaagcgtaagcgcgttgaagttaaacaggggaaacagcccatgaacaacaaagaagagttcatgggaagtgatgatatgtccaacatgccaaggtag</cdnaseq>

Protein Sequence

<aaseq>MARRRRRRRRAAPSPTSALDGDDILREILVRLPTSPSSLPRASL VCKQWRRVVSDPAFLRRYRAHHGEPLLLGFFADHCGYPVFRSIHDAPDRIPPEHFLMP RDKGAGRCNWDVLGCRHGRVLVYNRTRNEITVWDPATGHRSCAAAPPELGDDKEKIVF NGAADVWGDLITLECPPVYDTCLPSTLIGYSLYWLFSGEEEGILEFDLGRQSLATIEM PSEFLHYNSHRSFQIMPAEDGGICLAILSYQIMELWERKISSDGVGVAEWTMLKKIEL GVILGLGHMGGWQNLIVAYDEDYQLIFVRTINGVFMIHLESMQFKNLGKDNFDGILHA YSAFCTAVGDLPRAERRVGTISEIMGFDEDDSNSADPPKGAGTVEGNAAAPSCETIPD EGMVDNENLDYVWNHGERIGEGFKCKYCKMTRKSGRGTRLKEHLAGRRHNVIACSGVP PKVRKAMRISLNKVKQRTKAAKNRRAKMKKPNTQNMVRHGVHNNSKEQQMQMAKQLSL EEFHYRQKMEKRGSTFEYGGGSDSRSAPDACCNVAGSCVGGGVVLPQPSSKTRLKLHG MDADDVYRGASAQTEIGTSELRKAWAEWFHNNGIPGIKADCPYFRRAMELTQQLGFNV AVPTGAEIDGAYLDADEEEINVDAINAEKSCEAVLDMPLITWTKKHIGKNHKANKKYH EMANTLTQDLGSPGSKRKRVEVKQGKQPMNNKEEFMGSDDMSNMPR</aaseq>

Gene Sequence

<dnaseqindica>3096..4102#1978..2133#618..1152#1..489#atggctcgccgccgacgccgccgccgccgcgccgcgccgtcgccgacgtcggcgctggacggggacgacatcctgcgcgagatcctcgtccgcctcccgacctcgccgtcctccctcccgcgcgcctccctcgtctgcaagcagtggcgccgcgtcgtctccgacccggccttcctccgccgctaccgcgcccaccacggcgagcccctcctcctcggcttcttcgccgaccactgcggctacccagtcttccgctccatccacgacgcccccgaccgcatcccgcccgagcacttcctcatgccgcgcgacaagggcgccgggcgatgcaactgggacgtcctcggctgccgccatggccgcgtcctcgtctacaaccggacgcggaacgagatcaccgtgtgggaccctgccaccggccaccgcagctgcgcggccgccccgccggagctcggcgacgacaaggagaagatcgtcttcaacggcgccgtgatctgccccgccgcctccggctaaggccacgtccatggcgactgccactccagcccttccaggtcgtcttgataggcatccacaccgactacaaacccgtctacgcttcgctctactcgtcgcaggccgacgtatggggcgatctcatcacattagagtgtcctcctgtgtatgatacatgcttgcccagcaccctcattggatattcgctctactggttgttcagtggcgaggaggagggcatactggagtttgatctgggtaggcagagtctagctacaatcgagatgccatctgaatttctgcattataattcgcatcgcagcttccagattatgccggcagaggatggtggtatttgccttgccattctgtcataccagatcatggaattgtgggagaggaagatcagctctgatggtgtcggtgtcgccgaatggacgatgctgaagaagattgaattgggcgtgatcctagggctcggccatatggggggatggcaaaatttaatagtggcatatgatgaagactatcagcttatttttgtaaggacgatcaatggtgtcttcatgatccaccttgagtcaatgcagttcaagaatcttggaaaagacaacttcgacggcatccttcatgcatacagtgctttctgcaccgcaggtaactccctgtctttacactacagggaaacaagaacaatctaattattcttgctgttgtttgcatgataatctttcatttagtaatggctttaatttctaagataacgtttatctttatccatcggcaaatcatctagtatttctttatggatttaataacactgctgcaagaaatgagataaaggaaagagttaaaaagttttgccgatcatgcaaataaatagagttacaatgttaatgggtcagaaggattgaactggcttgaacccttttaatgtgcaaaacatggccctttcttttggttttttcttctttgatatcagtattctttctatcgttttccacaatccacatcctacatggtcacagttatttagagtttctggcaccattggcagaactaaaaggctgatagttaggttgctttgcttttgaggttgtggatgctgtgtgtctaatcttcatttctagtaatagaaattggagagggatcacctccctttctttcaaaacagaagtcaaagttattgagagttccatatgtgccaggaaacagggtacgagtagcttggatggatgtagcagtatttttgtgtttatccgtccgtaaaagttttagatgtttaattatatctagtcattactgtttttttagttcctgctggcttctatgactctgtccaaagtagtatggccattggggatgtaatgactttataacccataaaatgaactaacaagtaattttataaggagccaatcatctcctgctatttataattttatatcccttctccccaatctaacatcactcctcatctagtgggtgatttgccaagagccgagagaagagttggtaccatctccgaaattatgggatttgatgaggatgacagcaactcagcagatcctccgaagggagcaggaacagtagaaggcaatgctgccgcaccctcatgtgaaactatacctgatgaaggtaagctatattttgattttgatttgtggatctcttacctgctagatcttggataatgagaactttgaaaggctgatgtgttgctgatttgtgagttccaatgagcaatatttctaaattgaaaattgatttgatctgcttcccttctattaaaatttcgttattagcttattcaattgcagtttttcgagtacgatgcttctttggtgctaaccttgtttctttctgtattgacataaaaaaaaggttttaggttttagggtttagggttttagcaaaacctgcctgcaatcaaatgttttagtttgcattttaaggactggaagagtggagcataccaacgtgattcgttgcaatatgcagctcaatgccatcctctgaaagcttgaagggcaccaaacaaaccccctgcatattactttaaacagagcagaataaaattgtttagtcaaagttaggacaatatgtaaaaaaaataaaacatattcaatagaaatggaatagagcttttcgtggtggtttctaagtcacttttaccttccagttactgttctaatgcacaacctagctatacatcaatattgactattaagcttgtttacagagtattttaatattagtcaatatctcaaattctcaatagccagctcaattgctcaatccagtttgttcagcaccaaaatccctctgattaatatattttaataagagagttctgcatagatacgaggggaagaatagaataaactgtaaagaaatcaaccaaaaaaagcaatcaattggagaaatggaactttgagccattcttagtccatgaattgaaggaattatttcttttggatcataaagtttcttgaatccatatgtttcaattaactaagtactgttattcgttaaacaagaccttctgatattgagtacatgtaagccttgttgagtcatttgttcttttgagcctgcaggaatggtagataatgaaaacctggactatgtttggaatcatggagaaagaattggtgaaggatttaaatgcaagtactgtaaaatgaccaggaaaagtggccgtgggacgcggctaaaggagcatcttgcagggaggcgtcacaatgtcattgcctgctcaggagtgccaccaaaagttaggaaagctatgaggatttctttgaacaaagtaaaacaaaggacaaaagcagcgaagaaccgtcgagcaaaaatgaagaaaccaaacacgcaaaacatggttcgtcatggtgtccacaataacagtaaggaacaacaaatgcaaatggcaaagcaattgtcattagaggaatttcactatcggcagaaaatggagaagagaggcagcacatttgagtatggtggtggaagtgacagcagaagtgctccagatgcctgctgtaacgtcgcaggcagctgtgtaggtggaggtgtcgtattgccacaaccatccagcaaaacaaggctcaaacttcatggcatggatgcagatgatgtgtaccgtggggcatcggcacaaactgaaattggcacatcagaactaagaaaagcttgggcagaatggtttcacaacaatggtattcctggaataaaagcagattgcccatatttccgtcgtgccatggagctgacacaacagcttggtttcaatgtggctgttcctactggtgccgaaatagatggcgcttatcttgatgccgatgaagaagaaataaatgttgatgccatcaatgctgaaaagtcatgtgaagcagttcttgatatgcccttgatcacatggaccaagaaacacattggcaagaaccacaaagccaataagaaatatcatgaaatggctaatacactaactcaagatcttggatcacctggaagcaagcgtaagcgcgttgaagttaaacaggggaaacagcccatgaacaacaaagaagagttcatgggaagtgatgatatgtccaacatgccaaggtag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0138000, RefSeq:Os10g0138000