Os04g0640300

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Revision as of 11:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0640300| Description = Conserved hypothetical protein| Version = NM_001060570.1 GI:115460869 GeneID:4337163| Length = 8424 bp| Definition ...")
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Gene Name

Os04g0640300

Description

Conserved hypothetical protein

Version

NM_001060570.1 GI:115460869 GeneID:4337163

Length

8424 bp

Definition

Oryza sativa Japonica Group Os04g0640300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32955519..32963942

Sequence Coding Region

32955596..32956177,32956671..32956891,32963651..32963801

Expression

GEO Profiles:Os04g0640300

Genome Context

<gbrowseImage1> name=NC_008397:32955519..32963942 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32955519..32963942 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtagctcgaaggtggcaatggtggctcaagcttgacggcggcaaactcatgcctctcgtatctctggcgacatccaacgatgacgtgaagctgattgggagcgcatgcaacgaatcatgccatgtgtggacgaagattgaaaccgctcctcttggtccaatgcgatacactgacagaatctacaatgagcatgaggcactgcggatgcgcaactctgtaaacattctttcagtgaagatactaagctcagatgtaggcttcccgattaatgtttatggcactgtaattgctagagacagcctcgatgagaagtgcatttatctcttccgtcgccctagagatgattgccaactcatcaactcaaaggacgattcgttgatcttgactggcccaactcgaggactcgtgttacaagacgctgtatattttgaggttgatctcagaattaaggatgaccgattaagagggaagaaaaaagagcatagcaagggattgcttatgattgatggcatccgaagaacaataaaggtcaaaactgaggtcgaaaatgacacttttgtcggtaagctcggcaccgtggagttgagatatgcagttattaaagacgcagtggaggctactgttgaaatcaaggttgtggagggatatttctgtggagaagtcgcagcttgcaccaccaacattcaagataaagttgttcttcttgatagcagaacatgctgtgtgatggccgacaatcttgatgtccagttatctcgacgtgtcatggctgtccacaacaaggagaagcttctgttgaccgttgttaatcaggatgacgaagttccaactggctgtgttacgcaaaccattgattttactccaaaattcaatggttcagatgtgactgaagttacttgtggtagtgttaagatgcttgtgaaggttacttggtctcttatggtctga</cdnaseq>

Protein Sequence

<aaseq>MAVARRWQWWLKLDGGKLMPLVSLATSNDDVKLIGSACNESCHV WTKIETAPLGPMRYTDRIYNEHEALRMRNSVNILSVKILSSDVGFPINVYGTVIARDS LDEKCIYLFRRPRDDCQLINSKDDSLILTGPTRGLVLQDAVYFEVDLRIKDDRLRGKK KEHSKGLLMIDGIRRTIKVKTEVENDTFVGKLGTVELRYAVIKDAVEATVEIKVVEGY FCGEVAACTTNIQDKVVLLDSRTCCVMADNLDVQLSRRVMAVHNKEKLLLTVVNQDDE VPTGCVTQTIDFTPKFNGSDVTEVTCGSVKMLVKVTWSLMV</aaseq>

Gene Sequence

<dnaseqindica>7766..8347#7052..7272#142..292#gtcggtgagccgctgccgccgtgctccttgctagatttggcctgaggctgccaccgcctgtgacgggcggcgcagctcgatcgagccaccaccggcggctaatctgcacacccttctcaccgatatgggcattgggaggcaatggcggtagctcgaaggtggcaatggtggctcaagcttgacggcggcaaactcatgcctctcgtatctctggcgacatccaacgatgacgtgaagctgattgggagcgcatgcaacgaatcatgccatgtgtggacgaagattgaaaccggtaagtccatcactctggtggctggattttttgctcgatttggatttttttcttcgtttgccgctcttcaattcttgtatttgggttctaattcgaggaaattttataaccaatttttgtatgttgtatatgcaagttcttttggtgtaacatgaaatgaaatggtttaaatttagtcacattatatgtaaatctagatcagaaccaatttgacacagactcgggatgatttttgtgtggtggactcgggatgttgctgtcggaaaaatttaggtgacgacggacaaaaattttcaccggaattcttgtgtatttgttattaggtatagatacagattaggtatatagatacgttgacatgcacggtgaatacagggctctttaatactgctgatggattcaatttatactgattttacaagttggggaccctctataccctgtattatgattgagggacgtgaataaaactcgacctatcagtagtatgaacggtgaattcacaggttgaagtccatgactaaatcaaatttccaaattttctttttttagaattttactgcacttggttgctccgtgtcagcttgggccatatacacggaccagcccaacagccagaagcctgttgctctccatgggctcgtgccacgtgtcaatcctgtggttgggtttcgtagcggctgcgtttcctagtattgagggatatgtagcgaacattttcattggaggaacaaattgcagcccggcccttttagcacaatccaggaatttttttcgtttttagatttttttttaatatttacagaaataatctatcgaccaaaaaaattgcagaaatagcccctgccgcccaaatggtgggcggcaagctgacgtggcagacggtgggtcgaccgcgccgtctgccgccgtcggccaaaattgcgattaggcccttgccgcccatacagagggcggcaaggggctaattgcaattttggccacccattcagagcttgcggccgtactttttcatctgggtcccttgccgccccaatagggacccagatgaaaaaagtacggccaaaagatttttctatgttatgttaataataaataaagaagtatttattagtaaaacttgttaatattgttataaaaatgtattgaagttggttgttgcgcaatttcatatgttaagtgagatattattttgtaccttattcgacgtattagtactcggataatttatataggcctatcgcagtctaggtcgtagaaacattatatggacttaaacaaggagaattatgtaacatgaagaaatagtagtacaatttgaacatgatacaactatttgcattgcggttacatagatgatattagattcgatataggagggaggtagtgcaatagttgaacacaacgacgatgtaataatgggacaaggaagcatgacagtagaaatttcaatatgccaagttgtccgataatagctaacccctacgtgaggatccctctcctctctcaaaccgcgctttagtaaccctgtattgctctggtagttcaagctgcacaacacggctaggtggagttagaacccttctggtgtctatccattctctgtattgacatctccttggtggttcctgggaggaaagaatagatgtaaagcaagcaaagttagtaaatgttgtgagaaaataaggaatcatgtaatcaaaatattcttaccatgaaatcgtcgtcaagaatatttggacaaacaaagaaccttcgacccaatgttgtaggatttatggaacgaagaacctgacaacgatcaccacacctgcatcttggacgggcttcccatggagggagtgccgtagttagcacccgccagtcgctctgttgttcacgacattgtcgttcataagccgcttttctttgtaagtattgctcagtactttcggatgcgaaataccagcgaccttcttgtaaacaagtggttaggtcgagaacgggattttctgtatcgacccactcgatgtatgcgcaagctgtagtgcgggtctgccgaatagagtagtgttacgaagaataaagcgattgcccatacggaatgaataagcatatgcagataataaaatacctcacggtcatagttagggcacttaaaaaagcgccttcctcgaatatcaggattcctcgaagccattagttggcatcgatcaccgcataggcagagaggacgctggcaccaaggtggtagtaggtatacacaaggatcgctacgccagtttggatcctcaacaccccggcgtctagccattgacgaaagccggtcggatttgtaatgaagcaagtggggaagagagtactgaatgtgactgagttctgaaagattgtgagggctcactcgttaaggcgacttatataggcgcaaaaaatcgagtgatacccctgacatgtgaacgtggtggggtatggtgggtacgcctgattggcgccgaaagatacatgcatgatcggcgccgaaagttacattggtcgtatgcgccaaatggcgggcaaatactcatatcacacgcgaataaaggaggctgcattggtgcggcagaaagtagtcgtgcatacgccgaaaggtattgtgcatgcgccaaaaggtatcgtgcacatataaccacaacgtagtcattacacaagcatacagtactggaaagtgaagcaagtaaataaaaagaagactgctctactggccctgccccgcgccgcgaccacgcttggtcctctgggcctgtgctcgcacgtagtcctgggagtaggtgaaacgatccggtggcacagcacgggtagcacgagtgtcccgcggaggagtggcctgcgcctggtcctgcgtctgcaccggcggtgcgcctcccagctgtgaggggccgatgacgtcctctgtcgagcctgaagcgaagtcgaagtcagtgatgtcgaagagcacggtggaagacaggaaggggtccgacgaggtcccagcatggtccagtggtggaccctgactcgacgtgccggctgcctgtgacgctgaccctgcagcctgggagaagtgggcggcctgcgtcatagcgaagtgggcgaaacctacacatcgacaacgggacccttgtaagctaagacataaaatgtatgtaaattgattgtggaagtaatgttgtttttttaagtacctgtggggggcacaacagaaggcctagccgaggaaggcggggtgctgaacggtgcacgaaaccctgaagcaatcggcaagtgaaacggctcacttatatgtgcgaggcatgtatagaagtagtaataaaaatagttacctccgtgcggagggggagtcggcctaggaacgtgcgcagctggacagggaccagtcggtacgggtggccgctgtacagctgcgtctgcccgagcaacgtcgtctccacggacaccgcgcatcacccagttgtaaacttctgccaaatttgttgtcattattccatatctagcaccacctgtgtcatacgccttggcccatttctcttttggttcatgcagaatccactgagaaaattcccgaatctccaatccagttcttctaaccaatgttggactatccgttgggagaggtccaagagcttgaggagggtcagcaacggcggtcgatggagccgctgcacgctgatcactgcatttggctgtcaactcatctaatctcttccaaagctcattgaattttttctcctggttctgattgcacagcctcttgaacatgttcatgagctccttgttcttgaattgcttgaagaaattagctcccatatgacgcatgcaccacctactctgtacatcttcccaaacaccggggtatcctcgttccatactcccaaactgcaactctcctatcgctcgcagaatgccagcgtgcctatcatgtatcaggcatacatttggcctcataccaacaacttttgttttaaccaatttcaggaaccagtaccagctgtcggtattctcactctcaacaaaagcaaatgccaagggcaatacctgattgttcccatctacccctattgctgttagtatctggccccgatactttcctgtcaagaatgtcccatcaatgcagagaacaggacgacagttcacgaatgccatcttgcatgcatgtagagctaagaacgccctttgcagcacactcttgccaggatgttcaattgaggggaatttcttcacttcgtaagagctcccagggtttctttcctcgataacaccaagcaggcgtggcaaattgtcatacgaggcttcgtaagttccaaatctcatctctattattttctgtttgtccctccaggccttggcatagctaatagtatacttgtatgtctcttcaatgtgtcggattattgaccttggttcatatgtgagattatcgatgacatgcgcatacatctcagatgcaacaaatgcacatgtaatgttcctgtggtatttctgaacaccaggtagaaaacatgtatgcttggtaacaactgacaccgtccaataatccttccatttccccttatacgtgtgcactctccagggacaaccatctttttccttaacacaccgaacttcatattgcgaccggttcgacttggcaacccaaaactctctatgaagtgacactgcaaaatgttttaccgcctccttcatatcttctgctctactataaatcgctccctgaataacctcattttctttgtactcccatctcacactatcctcttcagagacgatcagcccagaaaaatcctcactagcccattctgctggattaatatccgtctcatcatctgacgaatcaccttcctctacatgctcgttgtcagaatcctccctctccatttcatccacaatggcaccgacagtctccccctcgtcagccactccacctggttgaatgcccactggagctactacgcccccgtcctctcgtgcgttgacctcctccacagaagtctcgtttacttcagcacttggtccctcgctatcatccatgttcgtctgcacacctggatccttcgggtgaacaaacggaaccaaagctagaggccacccgcgttgcaatgcattttccaaataccatctccacactcgagagttttgaactggcattagttcccaataaaaaccctcagttgcccgacttactataacattgattgttatgtcacttgtctgtggatcaactctcaagcccctcattaaccatccttttatagaaggtacactcctctcagccggtctctcaattcccctttctgatacaataaaatctgacagatctaccccagttggcccgtaacggacgtttcctggtccatggtaaacttggaatatttgtttgttcgacatatctgtcaacgaaataactagatcatattactctttcatgcaataaacatctacaacgtaatatcttcttgtgtaagccaatgcaacggtaatgtattaattccaaactagcagatctacgtagttaccgatatctacaatacgcacttctagattagtacaactaaaaccctaaaaatataatgcatttattcaaacaaaattttaaagaatacacactatttaactcaatagtcacatataggatctatgaatattacctgaaatcggcatctgaatccggcagggcttcgccccttcttctcttctcctcccctctcttcttttttttcactggaattgaggagagaagaatgagggctgggggctgggcagcaggccttttataggcagcgaggcctgccgcccggccagagggcggcaaggggccgcctgcaaaatagccggccccgactggcttttttgcattcgggccacttgccgccccaccagagggcggcaagggttttcctgcaaaaaaccctccctccgtcaccgcccgttcctcccccgtttgccacgtcagcttgccgcccccagaggtgggcggcaggggctatttctgcaattttttttggtcgatagattatttctgtaaatatttaaaaaaaaatctaaatccgaaaaaaattccacaatccagcacagaccagcccacctacaacaccaatcccggcctaatagaatacagcaaaacaagctcactgcggcgtactgcggcggcggcggcggcgatggggcgccacgacgtctctgtattcgacgatgaagaaattgggcgcgtgatggatttattcttcaccgatggcgtactggggttggacggcggcgtatcgccggaggaggaggaggaggaggaggaggtggaggtggacctcgagcccttgttctacgacgaggctgcgacggtggcggagtcggtggcggcggcggaaaggcggcgggtgcgggaagaggatcgcgcgcgggtggtggagcagcagaccaaggtgaggaaggcgaaggaggcctatttcaagaagaaccgcaagttcaatcccaagactggccttcactacttcaccagaatattcttcattaaccccctcaccttcgacctcaacgaggagtgtaagcatctaaattctcccccatgccctctctcttagtcttcaattcaagcaattactatgaaacaatctttctttcacaatgtattttaaatgtattatatatatattgacttgaagaagcaactgcagtatattgaatttcctgcataactgttaattggcactatttttttcccttgtttttgttactactacaagtaacctggttcattgaattcatgcaatgcagctcctcttggtccaatgcgatacactgacagaatctacaatgagcatgaggcactgcggatgcgcaactctgtaaacattctttcagtgaagatactaagctcagatgtaggcttcccgattaatgtttatggcactgtaattgctagagacagcctcgatgagaagtgcatttatctcttccgtcgccctagagatgattgccaactcatcaactcaaaggtactaaaaagcattaattttcttttcaaagaacagtgcattctgtttctcttcacatccatcgatcaaattgtactgccatcttgcatatctgtatatgaatctaaatgtcttactgctctcatctgcagtcaattttcatttggtatttgcgcgctgttttattaattgtcaatctaacatggccaaaatttattatggcatcttttttagttgatgttgcatctataatgtggccaatatcttttgttcgtgagttgtttctcatgtcttgttgaaaagttatatggtataaaagtttaacaagtgtacatacatgacagcagttgaccatatcatggcattagtaagatgcagatgtagacctatatatgctttgtatcatctttggtaatagcttttatatgacgcttttacttaaatttgttcctatatttattattttgcattcaaagtaacacgacattaccttatcatgttacttgattcacaggacgattcgttgatcttgactggcccaactcgaggactcgtgttacaagacgctgtatattttgaggttgatctcagaattaaggatgaccgattaagagggaagaaaaaagagcatagcaagggattgcttatgattgatggcatccgaagaacaataaaggtcaaaactgaggtcgaaaatgacacttttgtcggtaagctcggcaccgtggagttgagatatgcagttattaaagacgcagtggaggctactgttgaaatcaaggttgtggagggatatttctgtggagaagtcgcagcttgcaccaccaacattcaagataaagttgttcttcttgatagcagaacatgctgtgtgatggccgacaatcttgatgtccagttatctcgacgtgtcatggctgtccacaacaaggagaagcttctgttgaccgttgttaatcaggatgacgaagttccaactggctgtgttacgcaaaccattgattttactccaaaattcaatggttcagatgtgactgaagttacttgtggtagtgttaagatgcttgtgaaggttacttggtctcttatggtctgatgacaaatgaggcgcagtacaccgtacttgtgaagcctgtggcgccttacttaatcatatattgttaataatgcaat</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0640300, RefSeq:Os04g0640300