Os04g0640700
| Gene Name |
Os04g0640700 |
|---|---|
| Description |
Similar to Alpha-L-arabinofuranosidase/beta-D- xylosidase isoenzyme ARA-I |
| Version |
NM_001060573.1 GI:115460875 GeneID:4337166 |
| Length |
6778 bp |
| Definition |
Oryza sativa Japonica Group Os04g0640700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:32987653..32994430 |
| Sequence Coding Region |
32988007..32988578,32988664..32989080,32989177..32989524,32990300..32990397,32990511..32990680 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:32987653..32994430 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:32987653..32994430 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccatggcggcgaggggagtgttggccatggtggtggcggtggcggtggtgtggtgcaataatgtggcgagggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggttctgcgaccggacgaagagcagcgcggcgcgggcggcggacctgctggggaggctgacgctggcggagaaggtggggttcctggtgaacaagcaggcggcgctgccgcggctggggatcccggcgtacgagtggtggtcggaggcgctgcacggcgtctcctacgtcggccccggcacccgcttctcgacgctcgtccccggcgccaccagcttcccgcagcccatcctcaccgccgcctccttcaacgcctccctcttccgcgccattggcgaggtggtgtcgacggaggcgagggcgatgcacaacgtcgggctggccgggctcacgttctggagccccaacatcaacatcttccgcgacccgcggtggggacgcggccaggagacgcccggcgaggacccgctgctcgccagcaagtacgccgtcggctacgtcaccggcctccaggacgccggcggcggcagcgacgcgctcaaggtcgccgcctgctgcaagcactacaccgcatacgacgtcgacaactggaagggcgtcgagcgctacaccttcgacgccgtggtgtcccagcaggatctggacgacacgttccagcccccgttcaagagctgcgtgatcgacggcaatgtggccagtgttatgtgctcctacaacaaggtcaatgggaagcctacctgtgcagacaaggacctcttgtcaggagtcatcagaggggactggaagctgaacggatacattgtgtcggattgcgattcggttgacgtactgtacaataaccaacactacaccaagaaccctgaagacgcagctgccatcacaatcaaatcaggtttggacctgaactgcggcaacttcctggcgcagcacaccgtggcggcggtgcaggccgggaagctgtcggagtccgacgtcgaccgggccatcaccaacaacttcatcgtgctcatgcgactcggcttcttcgacggcgacccgaggaagctccccttcggcagcctcggccccaaggacgtgtgcacgtcgtcgaaccaggagctggcccgcgaggccgcgcgccagggcatcgtcctcctcaagaacaccggcgcgctgccgctctccgccaagtccatcaagtccatggccgtcattggccccaacgccaatgccagcttcaccatgatcggcaactacgaaggtacgccgtgcaagtacacgacgccgctccagggcctcggcgccaacgtcgccaccgtgtaccagccgggatgcaccaacgtcgggtgcagcgggaacagcctccagctcagcgccgccacgcaggccgcggcgagcgctgacgtgaccgtgctggtggtcggcgccgaccagtccgtggagcgcgagagcctggacaggacgagcctcctcctgccaggacagcagccgcagctcgtctcggctgtcgccaacgcctccaggggccccgtcatcctcgtcgtcatgtccggcgggccgttcgacatctccttcgccaagtccagcgacaagatctccgccattctttgggtcggctaccccggcgaagccggtggcgccgccctcgccgacatcctcttcggataccacaatcctggtggaaggttgccggtgacgtggtacccggcgtcgttcgccgacaaggtctcgatgaccgacatgcgcatgcggccggactcgtcgaccggctaccccggccggacataccggttctacaccggcgacacggtgtacgccttcggcgacggcctgagctacaccaaattcgcgcacagcctcgtgtcggcgccggagcaggtggccgtgcagctggccgagggccacgcctgccacaccgagcactgcttctcggtggaggccgccggcgagcactgcgggagcctgtccttcgacgtccacctccgcgtgcggaacgccggcgggatggccggcgggcacaccgtgttcctcttctcgtcgccgccgtcggtgcacagcgcgccggcgaagcacctgctcgggttcgagaaggtgtcgctggagcccggccaggccggcgtggtggcgttcaaggtggacgtgtgcaaggacctgagcgtcgtcgacgagctcggcaaccggaaggtggcgctgggcagccacacgctgcacgtcggcgacctcaagcacacgctcaacctgagggtttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MAMAARGVLAMVVAVAVVWCNNVARAQTPVFACDASNATVSGYG FCDRTKSSAARAADLLGRLTLAEKVGFLVNKQAALPRLGIPAYEWWSEALHGVSYVGP GTRFSTLVPGATSFPQPILTAASFNASLFRAIGEVVSTEARAMHNVGLAGLTFWSPNI NIFRDPRWGRGQETPGEDPLLASKYAVGYVTGLQDAGGGSDALKVAACCKHYTAYDVD NWKGVERYTFDAVVSQQDLDDTFQPPFKSCVIDGNVASVMCSYNKVNGKPTCADKDLL SGVIRGDWKLNGYIVSDCDSVDVLYNNQHYTKNPEDAAAITIKSGLDLNCGNFLAQHT VAAVQAGKLSESDVDRAITNNFIVLMRLGFFDGDPRKLPFGSLGPKDVCTSSNQELAR EAARQGIVLLKNTGALPLSAKSIKSMAVIGPNANASFTMIGNYEGTPCKYTTPLQGLG ANVATVYQPGCTNVGCSGNSLQLSAATQAAASADVTVLVVGADQSVERESLDRTSLLL PGQQPQLVSAVANASRGPVILVVMSGGPFDISFAKSSDKISAILWVGYPGEAGGAALA DILFGYHNPGGRLPVTWYPASFADKVSMTDMRMRPDSSTGYPGRTYRFYTGDTVYAFG DGLSYTKFAHSLVSAPEQVAVQLAEGHACHTEHCFSVEAAGEHCGSLSFDVHLRVRNA GGMAGGHTVFLFSSPPSVHSAPAKHLLGFEKVSLEPGQAGVVAFKVDVCKDLSVVDEL GNRKVALGSHTLHVGDLKHTLNLRV</aaseq> |
| Gene Sequence |
<dnaseqindica>5853..6424#5351..5767#4907..5254#4034..4131#3751..3920#2384..2668#168..575#gaacgaaaataaagaggctttttgctcgcaccgcgccgtccttgtcacgggccgcgctcaccagctcacacacacacactcgcaaccaccgcgctcgccgcgcgcgctctcggcgcgccacggcctatataaagtggcagtggcgaggagcaaggggagcaacgaccatggccatggcggcgaggggagtgttggccatggtggtggcggtggcggtggtgtggtgcaataatgtggcgagggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggttctgcgaccggacgaagagcagcgcggcgcgggcggcggacctgctggggaggctgacgctggcggagaaggtggggttcctggtgaacaagcaggcggcgctgccgcggctggggatcccggcgtacgagtggtggtcggaggcgctgcacggcgtctcctacgtcggccccggcacccgcttctcgacgctcgtccccggcgccaccagcttcccgcagcccatcctcaccgccgcctccttcaacgcctccctcttccgcgccattggcgaggtcagcatgcaacaacacctcccacttcttcttctcttccatgtcaccattttcgatctgcattgcactgcacaacctgcattgcgatttccggtcgcgtttggtgcgatttgacggtggtgcgcgggttggtggggttgggggattcggtgcagtgcggtgcagggtttgatgagagaatgttgcttttttttttttgttcttcttcttttcatcatccatgcaatgtggcaagccacgaaaagccgcaaaagcgcgtcacggattataccattccgcttggtttcctttcgccgtcgcagaccgcgcatttacgctgctgcttgttgccaagctacttccaggttaaaagaagcgccgtaacaataaccatagtaaatttctcccctagaatctactgtagctagcttagaagtactttttacaatgggtacacattttcatatggaaaagcacggtgaaagtaacgcacgttttactatgctcaaaccggcaaaaccactgcgacgaaagaaaaaacaagaatcagatgatagccactgataagtcacacaattagcacatttcatcattttgcacgtcatgtgattcctgtgcttgaaggaaagaatgtgtgtgaacatagtcagtatggtacacgcattgccccagcaacagctgcgatgcaacgcacctatgcatggctgtgcctgcgccgtccaagatttacggcaggatatgctggtgtcccttgtcacgggcgttttgtacgtagcagcggcgttctaggccaggacccccactggaattttagcattccaatatcctatccatctgataattgcataaagggttttattataaaaaagaaaattacatgaagggttaaagagcatttaggtttgcaagcaaggaccacagagaaaaatgggtttaggccaatgaccttgctgcacattgcacccaaagacatgtacagtctttctccatgtgtggattcagagtttcagacatgggcatttcttttctgcgcccaagatgatactgtctcgtggattgcattaattggacgctagcacgctgctcgtcgtcaggagccactgcttagcttcccccccatctgttgaggcgtcactgtctcatggggattaattcagaaatggaggctcaaaaagcttggtccatgatgtataatctgatagtactggtacgtgaggccctctctccgtgcagcttttaccaaagttcagttaatcatcagctccatcggcacctagctcctgtcctcatcgagtttggaaaagtgtcatttttccttccaactcgccaagaacaatgaggtgaacgtcgtaggatattagttagttctcatttccagatttcctgggtacgatcgatttcgtttgggaattagctataacatggactaatcatgtgttcccttgaaactggagacatcagaccatattaagctttgtcccaagaatccagctgcggcatgagacaattcagagtcaggatcatatgcctcgcatcttatcttcggttgcacctaccaaattatttgcagcttgaccacggtctatccggtagcctactccagtactactactagtactgttcttttcttattattttttgttgttgttgttgaaaattcagtactactatctacgagtatgacgcagcgaacatgatgcatgcattgcacgttaatttccagtgaaatgcactgaacattttacaagttggtgaaatggtctgatcggatgaatatttttctgacgagaggatgggaaactgtgtgcgatgtgttctgatttctgaaggtggtgtcgacggaggcgagggcgatgcacaacgtcgggctggccgggctcacgttctggagccccaacatcaacatcttccgcgacccgcggtggggacgcggccaggagacgcccggcgaggacccgctgctcgccagcaagtacgccgtcggctacgtcaccggcctccaggacgccggcggcggcagcgacgcgctcaaggtcgccgcctgctgcaagcactacaccgcatacgacgtcgacaactggaagggcgtcgagcgctacaccttcgacgccgtggtaagctaatccgatcatcttcttgtttctctgatgcattggtaagcaatggccatggcgtgaatgcgccgtgctcgagttgccgttttgcacaattgaatactgcctgctcacctgccatggccgcagcagcaggtgatacacatgcgagtaaatgagctccgcttgctacagtgagaatcagttggtgattgacccatgtagcagcaaccaacctctccctttcgttagtgtaattgaggatgcatctccattttacgtaagtggccaatcaatgttcgagtacagccgttgccgttgattggaccattggatccgtctctctccctgcgagatgacgccgacaatagcatgtagacgaacctctacgacaagttaattaggcccatacggattactttaattttctgtacttactcttcgtggctgcaccactgtgcttgttatttggacagtaacatgctggtttttgcacctgaatagaatactgatcattccacggaaccttaaattaagttagatagctataatttataaacatgggtttttttaactaaggatccaggaatgtatgaacacgtatagataaaacaaattgcagattgttaatttcctcagattctggtttgagttgttgcagttccccgaaatggcagatcttggccatttctacctaccaaaactcataaaaaacactgactttgcacatcgctggcagcgtcgcggcactgttgatacagatgattggttttttattcgcacaagtacagagcacatgactggaaccttttgcttttgtgcatgttaaatttgtgaatgctaatcagataaactaaaaaaaaaatactgcatctaacataatcatgcgtgtcgcatcagaaccagctttttaggcctaaaaagcttatcaatacaatttgatacacccagcattgttggtatgttctaccaaactgaactaaaaattcagtattagaaatgaaaatagaggtagtgggagaagagtagcaatcaccaatgtgtgtggccatgtgttcattgctcatactcgtgtcccaattcgtgttcttgtgaatcttcaggtgtcccagcaggatctggacgacacgttccagcccccgttcaagagctgcgtgatcgacggcaatgtggccagtgttatgtgctcctacaacaaggtcaatgggaagcctacctgtgcagacaaggacctcttgtcaggagtcatcagaggggactggaagctgaacgggtcggtctctccctactcctcttaacacttttagaacttcagccatctgatgctttagagaagattcagagatcttgtaactcttgttctaatggtgtatgttgttcttgcagatacattgtgtcggattgcgattcggttgacgtactgtacaataaccaacactacaccaagaaccctgaagacgcagctgccatcacaatcaaatcaggtactgttcattccttagtcacaaccacctcttaactatatgcattcccatgtagtacagacaatatgcggttgcaggattcgatggtctaacctctgacgagatcaaaccgttgattttcctttaaagtttggtttgattaacgcgattcctagcagctaggcaattatagtacgagttgatatgtgcagtagccatcgggttgttagggagtcttagtgtaattgatgggggcattagcagcgtctttagagcttaataggccttgataacctgcaacctgacctgacgaaattattccaagctgtgtcggtgaacccacggtatcattaggtagcactactgattttcagttatgttcaagtgcagtagtacaagactgctaagtggagtagctcctactgttttccattctgtatctgtcattatagttttgaccaatactgattaccacaggcaaaagagaagttacataattctgctgcattttatcatgtgctacaccgtcacataattttgtcttcaaatttgtgagaacgctataactattagctagtactcctactctgtatcatgaacctatcctcaagtttttcggcactatactgatgaatggaccgaaacagattaatgatttgtcaggcctcaccgtgatgaaaaaactcctcaactgaggaccatttctgttcatactacactaacaaatcttctgcattcaacctttcgtttatttatttttacatttttccttatttgtttgaccaaattgtggcaggtttggacctgaactgcggcaacttcctggcgcagcacaccgtggcggcggtgcaggccgggaagctgtcggagtccgacgtcgaccgggccatcaccaacaacttcatcgtgctcatgcgactcggcttcttcgacggcgacccgaggaagctccccttcggcagcctcggccccaaggacgtgtgcacgtcgtcgaaccaggagctggcccgcgaggccgcgcgccagggcatcgtcctcctcaagaacaccggcgcgctgccgctctccgccaagtccatcaagtccatggccgtcattggccccaacgccaatgccagcttcaccatgatcggcaactacgaaggtgacaccaattctggacaagctgatttgatcggtcaagaagagaattatattctcgtgcactgatcggatgaatgctggtgatgtcatggtgcaggtacgccgtgcaagtacacgacgccgctccagggcctcggcgccaacgtcgccaccgtgtaccagccgggatgcaccaacgtcgggtgcagcgggaacagcctccagctcagcgccgccacgcaggccgcggcgagcgctgacgtgaccgtgctggtggtcggcgccgaccagtccgtggagcgcgagagcctggacaggacgagcctcctcctgccaggacagcagccgcagctcgtctcggctgtcgccaacgcctccaggggccccgtcatcctcgtcgtcatgtccggcgggccgttcgacatctccttcgccaagtccagcgacaagatctccgccattctttgggtcggctaccccggcgaagccggtggcgccgccctcgccgacatcctcttcggataccacaatcctggtgagtgcattgcatctctgaattgttctctttctcagaagaagttttttgacatgtgagctgagctgatcaccatactgttcaggtggaaggttgccggtgacgtggtacccggcgtcgttcgccgacaaggtctcgatgaccgacatgcgcatgcggccggactcgtcgaccggctaccccggccggacataccggttctacaccggcgacacggtgtacgccttcggcgacggcctgagctacaccaaattcgcgcacagcctcgtgtcggcgccggagcaggtggccgtgcagctggccgagggccacgcctgccacaccgagcactgcttctcggtggaggccgccggcgagcactgcgggagcctgtccttcgacgtccacctccgcgtgcggaacgccggcgggatggccggcgggcacaccgtgttcctcttctcgtcgccgccgtcggtgcacagcgcgccggcgaagcacctgctcgggttcgagaaggtgtcgctggagcccggccaggccggcgtggtggcgttcaaggtggacgtgtgcaaggacctgagcgtcgtcgacgagctcggcaaccggaaggtggcgctgggcagccacacgctgcacgtcggcgacctcaagcacacgctcaacctgagggtttaaattgattaggagttggaattaaacgggagatttgctagtgaggaagggcctctgatctgattgatacacggagtttggaattggattcgtcaagggaatttgcattacgagtggccgtcagaaatcagaattggttaatggggggtgtaataaggacggactcccccgttggagagaattggatcctcgggggtgggtcttttgctgtgggtgttaacatttgatttatttggagggtcgatttgcaactgtaatctttggaaaaagaaatttccgcaagtgtaattgattggaagggaaattagctcattttcgtccattcaattcaattcaaaatttcaaatcgttgctctc</dnaseqindica> 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| External Link(s) |
