Os10g0138300

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Revision as of 08:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0138300| Description = Conserved hypothetical protein| Version = NM_001070669.2 GI:297610085 GeneID:4348073| Length = 4020 bp| Definition ...")
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Gene Name

Os10g0138300

Description

Conserved hypothetical protein

Version

NM_001070669.2 GI:297610085 GeneID:4348073

Length

4020 bp

Definition

Oryza sativa Japonica Group Os10g0138300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:2353624..2357643

Sequence Coding Region

2353668..2354940,2356303..2356419,2356520..2356560

Expression

GEO Profiles:Os10g0138300

Genome Context

<gbrowseImage1> name=NC_008403:2353624..2357643 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:2353624..2357643 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgagttgccgccggtgcagatcgtcgcagccaaggacgacgtcccgccgccgtacctgaccgacaacgtcgtccacaacctgctgctctgcctggcgccggagccggcatacctcgccgtggcgacggccgtgtccaccaagtggcggagcgtcgtccacagcgaggcctgcttcggccgccgcttccgcctggactacgacgggccgacgccgctgctcggcttcttctccaacaacgccgcggggccgttcttcaccgccaccggcgccggcgtggtgggcctggcgccgccggaggaggccgtctcggccggcgacggcagcgtgcagcacatctacgacgcgcgccacggccgcgtcctgatggacggccgggaggacaaggagctcctcgtctgggaccctctgtcccgccgcaaggacttcatccccatgccgcccggctacttcgtcggagagggctacggcggcggcgcgttgatctgcgaagccgaccacggcgccggcgacgactgccatgccgcgccgtaccgcgtcgtattcgtgtactgcggctcggatcggccccccaccaccatggctagcgtgtacagctccaggaccaacacctggggccccgtggccaccatggatgctcgcgtcactttcgagctcaagcaacccgctgtgctcgactataccgtctactggttggtaaatgggaggacccaaatcattgagttcgagttcgataccaacagcctagcactattcagaacaccggtggatctcccggacatcgtcgtcttccccatggaagacgggcggctaggctacactggtatgatgggcccaatcgtcagggttttcgccatcgaagatatctatgaagacggtgatgccacctggacaaaagttactactcttcatctagatgctatgcggccaagccagtcatatcagcaagttcttgattcggacacagactctgactccgatgatgaggaggaggttgtattattgttggcacatcagtttggtcccaaggcgaagaaggatagcaaaatcattccctcgcacccgccaactattaagagtgataacgacgaatataaccatgtcgtgatcaggccaagagttatcgggttcatagaggatcctaactcaatcttagttcgaaatgagctaggtgtattcatggttgatattgaatcaaacgaatacgagcagttatctcagaggatctacttcaccactgtctacccttacgagagcttctacaccacagttggcaaagcaaatttcaatgatccggtgctgattgatcatgagaacaacgatgaacaaggtttacaacagcttgaacccctcaatgatacaatacttccagatcaggagaacattggtggagggattagtgcttcaggtgatggagacgagcagtaa</cdnaseq>

Protein Sequence

<aaseq>MAELPPVQIVAAKDDVPPPYLTDNVVHNLLLCLAPEPAYLAVAT AVSTKWRSVVHSEACFGRRFRLDYDGPTPLLGFFSNNAAGPFFTATGAGVVGLAPPEE AVSAGDGSVQHIYDARHGRVLMDGREDKELLVWDPLSRRKDFIPMPPGYFVGEGYGGG ALICEADHGAGDDCHAAPYRVVFVYCGSDRPPTTMASVYSSRTNTWGPVATMDARVTF ELKQPAVLDYTVYWLVNGRTQIIEFEFDTNSLALFRTPVDLPDIVVFPMEDGRLGYTG MMGPIVRVFAIEDIYEDGDATWTKVTTLHLDAMRPSQSYQQVLDSDTDSDSDDEEEVV LLLAHQFGPKAKKDSKIIPSHPPTIKSDNDEYNHVVIRPRVIGFIEDPNSILVRNELG VFMVDIESNEYEQLSQRIYFTTVYPYESFYTTVGKANFNDPVLIDHENNDEQGLQQLE PLNDTILPDQENIGGGISASGDGDEQ</aaseq>

Gene Sequence

<dnaseqindica>45..1317#2680..2796#2897..2937#gatttccaagccctagcactacactcactcacctaccccgagacatggctgagttgccgccggtgcagatcgtcgcagccaaggacgacgtcccgccgccgtacctgaccgacaacgtcgtccacaacctgctgctctgcctggcgccggagccggcatacctcgccgtggcgacggccgtgtccaccaagtggcggagcgtcgtccacagcgaggcctgcttcggccgccgcttccgcctggactacgacgggccgacgccgctgctcggcttcttctccaacaacgccgcggggccgttcttcaccgccaccggcgccggcgtggtgggcctggcgccgccggaggaggccgtctcggccggcgacggcagcgtgcagcacatctacgacgcgcgccacggccgcgtcctgatggacggccgggaggacaaggagctcctcgtctgggaccctctgtcccgccgcaaggacttcatccccatgccgcccggctacttcgtcggagagggctacggcggcggcgcgttgatctgcgaagccgaccacggcgccggcgacgactgccatgccgcgccgtaccgcgtcgtattcgtgtactgcggctcggatcggccccccaccaccatggctagcgtgtacagctccaggaccaacacctggggccccgtggccaccatggatgctcgcgtcactttcgagctcaagcaacccgctgtgctcgactataccgtctactggttggtaaatgggaggacccaaatcattgagttcgagttcgataccaacagcctagcactattcagaacaccggtggatctcccggacatcgtcgtcttccccatggaagacgggcggctaggctacactggtatgatgggcccaatcgtcagggttttcgccatcgaagatatctatgaagacggtgatgccacctggacaaaagttactactcttcatctagatgctatgcggccaagccagtcatatcagcaagttcttgattcggacacagactctgactccgatgatgaggaggaggttgtattattgttggcacatcagtttggtcccaaggcgaagaaggatagcaaaatcattccctcgcacccgccaactattaagagtgataacgacgaatataaccatgtcgtgatcaggccaagagttatcgggttcatagaggatcctaactcaatcttagttcgaaatgagctaggtgtattcatggttgatattgaatcaaacgaatacgagcagttatctcagaggatctacttcaccactgtctacccttacgagagcttctacaccacaggtataaatctgtcatatctattttctttaacaaaacaacaatattttagttttgcctaccgtttaattaaattacttataaacacatttaggaaaaaaagtccttcttattagaaaaaatcagtgttagtatacagatttatcttccacactgcggtttcttagcatttgggtttgctgtaaacttagtgcaacaataatatagctagctagctaggggcaaacattttgaaaaaaaagtttaagtctctatattatagggttagactcctaaaaatgtttcttttggataaagtaaatgcaaaatagtgtttttgctcgggcagcaagtgcaaatttatagagtgtattgcattattatactaaaaaatggctacccatctaattattttccatagaattctgttcatgagtattgccctcttcatgttgcccatattcttcatatgatgattagactatctcattaagtgtatagtgctccgtttattttgttttgttgaataaatttgcttgttctaattatttgaggtatggtgcagcatatgatatattattgatctgatctgtgttcaccaaattttgcatagtctttctgcatatatagttgctacagtaggacttcacaaactgcatatgtgtttcaatgcaaaggtacattagattttcctaaatataatacataattatttaaacaatttgttagctagtcatcaattccattttcctctgtgcattttatggttggccacatcagattatacatacaattaagttcatcaactaatgtatatttctattacaacgtcttaagttgagctgataagcaagacggaatataccttcgaactgaactgccaagtgcatcttgaaaattattcaaacacaaatttagtttattcaatagctttgttactcaagtgataactacgatagaatttgtgctctaatagtattctgaattcaacaaactgcagataattgatctgagttaattattattcaattctagaatagtatatattacaattgtatgagtaattaaagattgtgcatatatagttgtaacttgcaatatgcatgataaattagctgttcttttatacccttttgcatcttctaattatcatatatatttaaaatatgttgacatggaattttgttcatttacgatcatgtgcttatctacatctgaatatgatattgacaatgtatacatttcctgtactgagatatgttcatatcagaatcacatctaatgaccggcattttcctaaaaaacagttgcatttttcacagcccaacatatctttcttgtcaattgcatagatcttatatattcgatgttgttacgtacatacagttggcaaagcaaatttcaatgatccggtgctgattgatcatgagaacaacgatgaacaaggtttacaacagcttgaacccctcaatgatacaatacttccagatcaggagaacattggtaaagaagtttacgacttaaatccattataatttataagtaaacagtaagcttatatggcttaaacagtaaagttttgcctgttcttgttttcccacaggtggagggattagtgcttcaggtgatggagacgagcagtaaacaggtctttctgttacctcatcagttcaagtggtatgaattattgtttgctcacctgctatatagacattattctcttttttgatccaaattaagttttcatttatagatagctagttagcagtttttttttagataatggattatatcaaacccggcctctacaccttgtgagggtgtacacagccaaaaagctacaccttgtgagggcgtacacagccaaaaagctatagttagcagtttaaaaagaccgtatgttcttatgtatagtttctgaaactttgctatgtcatttatatatctacacatttgttctttgtagacgtactagcatacaactccattttctgaggatcttgcagttgtgctagcaagatttctacacattttcttatgttcattttactagagcgagagtagcaaaaaaaatatggatatatgcagacataatagttagcgctaggttcaaatgttacaaatcttgcaagagctggcagatagacttgaatttagtctgacgatgctttttttatgttgacctgctcattcttatattcttcaattcttttactttatttaattagttaccagttccccaattgaagatagacttaagaagtttctggcaaagaaatgacgttttcattagcgacaaaatatcatttcgctatgtcatatttttgtaaaaatatttacatcaagttatagattgagaaattatttttctggaacaacagtaaatgtgtggactttgggatcagtttatataattgataattgatgacaattatatatcttattaattattatacacaggcatcaagattgggcgtacattgaagatttcttggtcggcagctagctactataataatcaggctatcgcacattcagtcagattctcagatgtgctgtaaacttgttaatttaattaataaacccatgtcatgtgtttgttgtttacctgcattaattttcgtatgtgtacttgcccctgcaacaactggtgctgcgccgttcaaatcttcagctagtataagtttagacgacagcagggatatatgtgaaatcaatgttttgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0138300, RefSeq:Os10g0138300