Os04g0642100

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Revision as of 11:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0642100| Description = Similar to Microtubule-associated protein EB1| Version = NM_001060581.2 GI:297603444 GeneID:4337174| Length = 3007 b...")
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Gene Name

Os04g0642100

Description

Similar to Microtubule-associated protein EB1

Version

NM_001060581.2 GI:297603444 GeneID:4337174

Length

3007 bp

Definition

Oryza sativa Japonica Group Os04g0642100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33083095..33086101

Sequence Coding Region

33083213..33083335,33083521..33083589,33083698..33083784,33084494..33084622

Expression

GEO Profiles:Os04g0642100

Genome Context

<gbrowseImage1> name=NC_008397:33083095..33086101 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:33083095..33086101 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggcggcggcgaccatagggatgatggacagcgcgtacttcgtcgggaggggggagatcctcagctggatcaatgccaccctccagctctccctcgccaaggtcgaggaggcggcgtcaggggcggtgcagtgccagttgatggatatggttcaccctggggtggtgccaatgcacaaggtgaattttgatgctaagaccgagtatgacatgatccagaactacaagattcttcaagatgtgttcaacaagctgcggttgagcaagaatattgaggtcaacaagcttgtcaagggacgtccattggataacctggagtttctgcaatggttgaaaagatattgtgattctgtaaatggtggaatcatgaatgagtatgtgccttggttatgctga</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAATIGMMDSAYFVGRGEILSWINATLQLSLAKVEEAAS GAVQCQLMDMVHPGVVPMHKVNFDAKTEYDMIQNYKILQDVFNKLRLSKNIEVNKLVK GRPLDNLEFLQWLKRYCDSVNGGIMNEYVPWLC</aaseq>

Gene Sequence

<dnaseqindica>119..241#427..495#604..690#1400..1528#tggcttctttttcgcttgccattcgcgtggaggcgtttcgaaaagtttgctcggctctccccgatcgagagagagagagagagagagagagagagagagagagagagcagcggaggagatggcggcggcggcggcggcggcgaccatagggatgatggacagcgcgtacttcgtcgggaggggggagatcctcagctggatcaatgccaccctccagctctccctcgccaaggtcgaggaggtaagggcccccccatttctttccttcccccgcattcgatttggttcctcggatgaaaccatgaaggcgtaggggtctgatccttttgcaatttaggagtgggtgtgtgtggaacttgtggttgggctgggactcggactgttgtgtgctgatttttctgggattttggtcgtgttcccctgcaggcggcgtcaggggcggtgcagtgccagttgatggatatggttcaccctggggtggtgccaatgcacaaggtcaatgcttcttcattcctgttgttttggatttgatcgatctgctttatgtaatgctgtataggtgccttaggcggttctgatgctttattgtcatggggtttgcaggtgaattttgatgctaagaccgagtatgacatgatccagaactacaagattcttcaagatgtgttcaacaagctgcggttgagcaaggtattggttctggcctcacaaatgagtgcttggcgtctttgatacatgtaggttttcatgatcacgcccttgcggctttgatggtttcttgagattctaaatttatggtatcaggagattttccattgaagcatgcctgttagtgacgttagcatagtgagatgacaaaaatattcatcatggactaaatttgttatgcaatattctgcggtactgaaatcagattgatgttgtgcttaacgacaagtggaaatgaaaactggttaagctcttttttgtgtagagctgtagtgtgtatactgcaaagattgattttgtgaggcatggatacaaaatgtctcatgattcatgatactggttatatcttagtattgtgcagcaaaaggcagcaatgtattctgtaaccgtactatcattaggatatggcaatgtgattaggttgtgttattatgtagaatgatggtggactggtgattgctttcatggtttcttatctcaaaattagtgcacgttgaagatgtactgttgttgtgtttgtcctattttcactctatgtaacaaggtcattagattagacttgtgccacaggatggcatctgattgtgaggcctttgttctaatgcttcatctgtgtccctctgcaactatttttagatcatatgccccatacaagctgtttgttctaatcaacagtggatgttccgtgcagaatattgaggtcaacaagcttgtcaagggacgtccattggataacctggagtttctgcaatggttgaaaagatattgtgattctgtaaatggtggaatcatgaatgagtatgtgccttggttatgctgaatatgtaagataattgcattctgttgctaattatggagttgagatttgagaaggcttgtgttcaattttcagaaactacaatcctgtagagaggaggtctaagggttgcaaagaacgcagtctcaaaggttccaacaagtcgtccaaatcactacaagctaatagattgtctagtgcaaattcagctgatggaggtacattgaatttgtttgatactatgtgcatcactaaagtattaataagtgagacttcaagtgtgcctttatggttcataggagtactttgctctcatactgtaatgattaaatcaattcaaggccttaagagaagctggatggtgccaccagtctctcatctacttaggagtgttttaaaatcaatgctcctttttatttggtaccatagaagcatgattcacttgtatttgatctcatttagtaatagctctatttttgcccaattaaacaggtccatgcgttggtaaagtcaatgttatctctgaagagcattacatagaacagattcagcaattatctgagaaggtatggaccatataatccaagtagctgattcatcttaataatgcgacctgcatcttttaaagtttcttctaatgtcaaaagcccaatgactattctgtttgactgttgtagctatccacttctttgaagttcagtgttctgtagactgtagttgtttacattgatattgctacctttaatccacattctaatcatcctcgctatgtagcgtgttagggtcatgttttgcatcttcaatgctaagtaaattgcaaacttatgagttttgataatgcgaatatctctattgagttgcagattgcaggcctgaaaatttctatggatagcgcggagaaagaaagagacttctacttttctaagctgcgcgacattgagatactgtgtcaaagaccagagttggagcatcttccggtaagtaattagctagggatcttccagtattgtgcctgtttgcgggcgcagattaaggctaataatttctgaggtcctatactcctattcattgaccaaatagtttcttttctttttggtttactactaacctgatgaatattgtcttgacagatgaccaaggctgtacagaagatactttatgcggctgatgcaagagattcgccattgcctgaggctaatgaaataatcacccggtcaccaagcatgttcccagatgaagcctagggagaaatggcatcaatacactcttaagctatatttagataattttgtggctatcctattttgtcgaatcgttgtaaatgagtaaataacgcttgacattagctacttgtggcaagtccaccgaagatatcttcggttctgacttgaatgtcaacttcctagaactagttgtgaactgaatatgcattagcaatgctcttctctcgtttctgatctccttggagatattttatggcattcgacagctcgtaacttgctt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0642100, RefSeq:Os04g0642100