Os04g0643200

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Revision as of 11:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0643200| Description = Amidase family protein| Version = NM_001060584.2 GI:297603446 GeneID:4337177| Length = 2796 bp| Definition = Oryza ...")
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Gene Name

Os04g0643200

Description

Amidase family protein

Version

NM_001060584.2 GI:297603446 GeneID:4337177

Length

2796 bp

Definition

Oryza sativa Japonica Group Os04g0643200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33135095..33137890

Sequence Coding Region

33135146..33135205,33135432..33135481,33135563..33135656

Expression

GEO Profiles:Os04g0643200

Genome Context

<gbrowseImage1> name=NC_008397:33135095..33137890 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:33135095..33137890 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtaaggacactggttaagaaaagcttcaaagaagctctggaaagatacgatattcttgtttcacctgctgcgccatcagcagcttacaagataggtgaaaagataaatgatccattagctatgtatgcaggagataccatgacggtgaatgttaatttggctggtctccctgcattggttgtgccttgtggatttttgaggtga</cdnaseq>

Protein Sequence

<aaseq>VRTLVKKSFKEALERYDILVSPAAPSAAYKIGEKINDPLAMYAG DTMTVNVNLAGLPALVVPCGFLR</aaseq>

Gene Sequence

<dnaseqindica>2686..2745#2410..2459#2235..2328#gtgggtcgcgaatactggacggttaccagccggcgtacgatgccactgcggtgcggcggcttcgtgaggcgggcgccattgttgtggggaagactaacctagacgagttcggcatggggagcactacagagggctccgggtttcaggtttggatacactaagaccagttcattgtatctttctagtcagaattcgttaaagtttgtaatctagaacagcaaaaatgtgtttatatttgttagtgaagtccaatgaaatcaaacacagatattgtatatttggacttatcagtgtgaaactcagttcatatcgctggttggcttcttgtagcataggagtattttcttagcaagtgcttcacctatggttttaaccgttgcataacatgataacaaagcattataatgcttgaagcaaagtgtagatatggggtgatctgactggtattaatggtggtatatgcaggtcacaacaaacccttgggacgattcacgtgtgcctgggggatcctcaggtggttctgcttctgcggtctctgctagacaatgtgtggtatccttagggagtgatacaggtggaagtgtgagacagccagcatcattttgtggtgtggtagggttaaagccaacctatggccgggtttctcgtttcggcctcatggcttatgcttcatcactagatgttgtgggatgctttggttcatcagttgttgacactgcgacaatcttgtcagtaattgctggccatgacaaaatggattcaactagtagctctcatgtatggaactgaaacatatccttgtcttacatttttcctttacctttttaattctgatatgttttttgtctgtttcaactgttacagaattgaaatctagtgatccttaggcatctatactccagtttaatagctagggctaaaaaacatttatctcagcttctaagcaatgtagatatcagaaacaaaaacttgcccagcaagatcctatgttgcattgacaactatctttctgtgactgattatcttgatgtctgatcattcccataaatcctgacattagtgtgttgtggtgtgatactgatggcaatcttgtaataaatttgtggttaacaatcttaacattgatttggcaaagagaaactaactgttgtccatctccatcttataaagttctgatttaatacattgcatataaaaaatatggtaggtttacagttttgttccattatcttaccatgattttggtcaccttaagatttacacatgtgcaattggatttggagctagaagacagaatgcgtaggcttgctgaatctgtttttttttggttgcttctataggatgtttcagactataaatcagagttggtcccactagatttgctagaatcaaaaccattaaatggtatgagaattggaattattcaagaaactcttggtgagggtgtagaaactggagtcatatcatcaatcaaggatgctgcttctcacttggaacaattgggatcagtggtggaagaggtttgttactcttctcttacactaaaaagtacgttatttcttgtttcacactgagttgttgaaaaattaaaatatttatgctgttctacttctcaggtttctctgccttcattttctcttggcctacccgcatattacatactggcttcatctgaagcctcttctaatctatcacgttatgatggtatcaggtgatatttctgtactttaatctcatcattttccctgtattcttaaagttagaaatatttatattttccaggtatcgtttacaggtatgggaggcaggtttcaggcgatgacttgaatgaactttatggaggttcccgggctaacggtctgggtcacgaggtagtccatcaactcccaccaacctccatctcttattattggaacttatcatgactaacttagctatctataaccaatacggcaagttttttgtgcatcacatggaccgcaaatcgtttgctggtaatttgcatgagaaaacaaacaatctaacattgttctgattatttttcaggtcaaaatgagaattttgatgggaacttatgctttatctgctggatactatgatgcatactacaaacgagcacaacaggtaatgataagacagtagcatcctatgcactttgcattttgataatttttacatctcagcaggcatttgtgcaaccaaaaaaaaaataataatcacgttcactgtagtaggtaaggacactggttaagaaaagcttcaaagaagctctggaaagatacgatattcttgtttcacctgctgcgccatcagcagcttacaagataggtatgctaataatatgattatttattgtatgattccttcactgctttccttcaggattgacaactcaataaattttggcaggtgaaaagataaatgatccattagctatgtatgcaggagataccatgacggtaacaatccttagcatatttctcttgtttagatttacagctacttttgggtttgctccaaagtaatccattgtctgctgcattctgcaacttcctagttcttgcaaaatttggtacatgttggtaaaactactaacctctagtagataatctcatggtcacaagtgatgtcaaacgttctgcagtaggagaatcttaaggagtggtagtctaatgactgatgcaggtgaatgttaatttggctggtctccctgcattggttgtgccttgtggatttttgaggtgatctgcggggctcccgttggacttcagatgattggatcccccttcagtgagg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0643200, RefSeq:Os04g0643200