Os04g0644600

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Revision as of 11:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0644600| Description = Epoxide hydrolase family protein| Version = NM_001060594.1 GI:115460917 GeneID:4337188| Length = 6455 bp| Definitio...")
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Gene Name

Os04g0644600

Description

Epoxide hydrolase family protein

Version

NM_001060594.1 GI:115460917 GeneID:4337188

Length

6455 bp

Definition

Oryza sativa Japonica Group Os04g0644600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33199606..33206060

Sequence Coding Region

33200925..33200964,33201138..33201281,33201572..33201647,33202905..33202975,33203176..33203247
,33203971..33204098,33204185..33204261,33204336..33204429,33204863..33204948
,33205460..33205535,33205628..33205942

Expression

GEO Profiles:Os04g0644600

Genome Context

<gbrowseImage1> name=NC_008397:33199606..33206060 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:33199606..33206060 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcctgctgcccctgcaccaccaccacctcgtctcctctctccctgccacgccccgcttgcagaggcaggtggtccggcggcggcggcagcagcgccaacgccgccgcttggagggcgcgtggaggaggagcgaagcggagtttggtagtcgcggcgagcggcagcaaggatgagacggcggaggggaaaaagcaggaggaggagtcggagttcaacccgttcgggttcgtgacggacaacccgtcgagccgcggcgccatccagctgccggagtcgcccgcccaggacggcaatgtcggccagatgctctacaggatcgaggacaaggggagggagttcggctcaagagtgaaatcaggaaagctgcggtggtttgtgagggaaacaggttccgctggtgcacgacgtgggactgtcgtgtttattcacggtgctccatctcagtcatttagctatcgtatggttatgtctcagatggcagatgctggctaccactgctttgctcctgattggataggatttgggttcagtgatatgccacagcccggatatggattcgactacacagaagaggagttccacaagtcactcgatgagcttcttagtactttaaatatcactgagccattcttcttagttgtccagggatttcttgtaggttcatatgggctaacatgggcactaaagaactcaagcaaagttctgaaggtagcaattcttaacagtccactcactgtttcttctccagtgcctggattgtttaaccagctaaggttgccactttttggtgaatttacctgccaaaatgctgttttggctgagagattcattgaagcaggtagcccctatgtgctaaagtcggagaaggctgatgtatacagattaccatatctatcaagtggtgcacctggatttgcattgcttgaagctgccaggaaagctaacttccgagatgtattaagtagaatttcagccgggtttgcatccaacagctgggaaaaaccaatattgcttgcatgggggatttctgataagtacttgccactccccatagctgaggagttccagaaaggtaatcctgcagccataaaattggagccaatagaaggagctggtcatatgcctcaagaggactggccagagaaggttgtgacggccctaagatccttcttgtag</cdnaseq>

Protein Sequence

<aaseq>MSCCPCTTTTSSPLSLPRPACRGRWSGGGGSSANAAAWRARGGG AKRSLVVAASGSKDETAEGKKQEEESEFNPFGFVTDNPSSRGAIQLPESPAQDGNVGQ MLYRIEDKGREFGSRVKSGKLRWFVRETGSAGARRGTVVFIHGAPSQSFSYRMVMSQM ADAGYHCFAPDWIGFGFSDMPQPGYGFDYTEEEFHKSLDELLSTLNITEPFFLVVQGF LVGSYGLTWALKNSSKVLKVAILNSPLTVSSPVPGLFNQLRLPLFGEFTCQNAVLAER FIEAGSPYVLKSEKADVYRLPYLSSGAPGFALLEAARKANFRDVLSRISAGFASNSWE KPILLAWGISDKYLPLPIAEEFQKGNPAAIKLEPIEGAGHMPQEDWPEKVVTALRSFL </aaseq>

Gene Sequence

<dnaseqindica>5097..5136#4780..4923#4414..4489#3086..3156#2814..2885#1963..2090#1800..1876#1632..1725#1113..1198#526..601#119..433#gcggagaatcttctttcttcccgaccgttcgacgcggctgcgccaaccgaaagcgtctcgccgcgccgccacgtctcgccggagcgcgcgcgcgcacacccacccgaacgccgccgccatgtcctgctgcccctgcaccaccaccacctcgtctcctctctccctgccacgccccgcttgcagaggcaggtggtccggcggcggcggcagcagcgccaacgccgccgcttggagggcgcgtggaggaggagcgaagcggagtttggtagtcgcggcgagcggcagcaaggatgagacggcggaggggaaaaagcaggaggaggagtcggagttcaacccgttcgggttcgtgacggacaacccgtcgagccgcggcgccatccagctgccggagtcgcccgcccaggacggcaatgtcggccagatgctctacgtaatgcccacttcgccacacctccttgattccgaactcgtatcattgttgaccatttctagtatgctgtaaagtaatctcgacgcgtgcagaggatcgaggacaaggggagggagttcggctcaagagtgaaatcaggaaagctgcggtggtttgtgagggaaacaggtactgtttcttcatttctgtgttggttagatgaaagatgatcttattgcagtgatcactgaacgttagtaaaacgttgtatgcacgttgatccagtgaaatggggtgtgtactgacgacgaagcagtattgcattgtgaatacaaatttagtatttaagaataaaaacgaatgatactttcactaagatagtggattttgtcagacctttgtgtatttcagtaatattgatttctcctacagtagtacataagttcatctccttctgcaaagcttttaaaggaaacaaaacctgtcccaatttgctataattctgcctctataaaacttaaggaaaatgtacctttttttgtttgtttgtcttgtaccttgtccttgtatagttgtcattgctgaaccatgaaaagaagggctcaccaggtgttcttgcaaacagagccatcttgcaattgtctctgtcaaataaaaagccccatgtaattgcttcataaatatggtgatacaattgtaggttccgctggtgcacgacgtgggactgtcgtgtttattcacggtgctccatctcagtcatttagctatcgtatggttatgtctcaggtcagactcatttatcttgcagcttgttggactaaacttaatttatgaaacaatttgttgttcttgatttgcattaccagacagaaaatatcagtggttctggcttaaattagtatgtggttctttctaaaatatgttttctttcgctgcaaagtttagctccatgcaccatttaagtggtgactttagacatctaacagctgcagcatgtgtatgtcctgttgattatgattccgagacagatgggtgaccttccagagactattaaaatttaaaagaaaaacatagtttgaatatggagcatatttatgacattatactggaagcttaataaatagggatcctcatgttaaatataaatttataaatcgtactaacgatttgtttctatcgatcattttacccactaagcagctattgaaattgctactagatggcagatgctggctaccactgctttgctcctgattggataggatttgggttcagtgatatgccacagcccggatatggattcgactacacaggtgtggccgtgtggcaaatgttgacaaaattaatgaatcttactaaactctcatttatattgtatcatgtgcagaagaggagttccacaagtcactcgatgagcttcttagtactttaaatatcactgagccattcttcttagttgtccaggtacatgcccaaaacattaggaacctgcattttcataataattctcatatatattttctgaatcgtttctttcattttcattctagggatttcttgtaggttcatatgggctaacatgggcactaaagaactcaagcaaagttctgaaggtagcaattcttaacagtccactcactgtttcttctccagtgcctggattgtttaaccagctaaggtcagtctttctgtttctcttgctttgcatcttaattgaagtgcatgctcagcattttacattgtgctacaagttcaggcatatagttctttagcttttcaacaaaatttaacttaaaaacaagccatatgtctgcgtacaccaacatatcaaccaaatccgctatacattgataatgcaagaatctgagcaaagatgcatcagtcactgctttactagtcactgcacatctgaatgttccagctccatttccttggcatttctacaatttctcaggcccgcccgaacccagcctgagcagaagtctgaaagcgcaaagcttgacctgaaagtgtgacataaatttatgcatgagcaatttgacgtccagatctacccgaaaaatgaacattgtgcatattctttttcacattgttttccttcttcagttttatcggatgttattgtggacttattatatagaaaatgccttgagggtggtatgttaatgctttcatccgccttaatagcgtagtatggtttttcgctattaacttttatttggactttatacaagctggtcctaaaaagagtatgagtatttgatacatgtgcaaatagaatttatctttaacctgcttactgctcaatatttttcactaatgctgcagttgatgccatcttgccttttttgcccttaatatttgtatcatggaagtaaattcaagtcacatttcaatgcaggttgccactttttggtgaatttacctgccaaaatgctgttttggctgagagattcattgaagcaggtagcccgtacgtatctatcattgtcacagaaattcttcattctcctcttcagatatgttatcattattcttcttactgatatgctcaaaataaggaaaaagtttggtttattcttcatattatgttgttctatatcagtcctgtccatatctgtggcatgttgtttattctcatatttgcttatattgtgtccacttgcttcacagctatgtgctaaagtcggagaaggctgatgtatacagattaccatatctatcaagtggtgcacctggatttggttagtctgtacacctgaatcacatgcccccaacatgtctttacattaaagttgtattgttctcagccatgaaacgtacctaaataaattgtcagctatatgactatgttttatcaatttatagaatccatctctcctaatgaaggaaatgcaaattctgcttgcacagccatttccatctagcttaccctccatcgcaatgattgggtttttcacattggcttgccaagcttgtcacaacctcctcctttgcctgggcttggggctgggctatattcataataaaggaaacgaaaattccacaggggaaactatttccttctagctaatcctaattactgtccatgggaaatactcgaagtttatgtttacatattttcactcaatgcctagctattttggaagttatcttatgaagaaatggcactgggtccacataagtgttttcagcaaaggatcttgattatattgctttagccttcataaagcaaaactgcaatttttagaaccctactagttacacatatgatgattactgaaaagtaccatgtttagtttattataggatatttgcttgcatgtttgggccaacaatttgtatctgtaccttagcctgcatggttaatgttgtacctgccaggctaccatgacaattatattggttgaaccttggacttcggagggaaggattatacttgttgaaggcatctgtttaagctattaagtattacatcatctatataaaaactgttgttttgttcgtccattctttatataaagctaatgcccactaaatacctaaagctcaacatgcaagcataatatttattagcactcctaaaacctacacgcaagcatgccacatcaacccattaaacacaggaaactcaacatgcaagcatataataattatatctacaatttatttcattctaaaactaaacacacacatgctaaatcatcattttcaaatcatttttataatatttcaatccaaatcgtttcatcatttttccattgtctaacatatatcccgcagcaaagcgtgaagtatcatctagtttatgctacgccttatgccaatagcatcgaacaactattacttcttctgcaacttatgttgtattccttgtactttaagaaaaatgatgtttagatttttttttatattcttttgtctactttttacctagaactgtcattaccatctgagattatttgacaaccttagttacatctcgcttttcttttttttagcattgcttgaagctgccaggaaagctaacttccgagatgtattaagtagaatttcagccgggtttgcatccaacaggtaagttaaacaaacaaacaatcactcatatttattgcatgttattgcttctgttctaactaaaaacagataacttaaacaaacaaacatatttattagcttctgatataattaaaaacagatagattatgccgtataacatgcaagttactactatgtccataaacatatgtatgcatgcacagcagtgtcaaaaggttcattctgaattcaagcaagcaatattagacaggtatcagttatcactaatgttttccagttctgaaacttctctctggtatttcctgcagctgggaaaaaccaatattgcttgcatgggggatttctgataagtacttgccactccccatagctgaggagttccagaaaggtaatcctgcagccataaaattggagccaatagaaggagctggtcatatgcctcaagaggactggtaattgtttttttactagctcagtattttctgtcgatctgtgtcctgtaaaatttgtactcatagttccatcggtgcttgcctgctttgacgtgtaaccttcaacctttaccttttggccaattcatatacttgtgcgatccttaacgcatctcacttgtcatgttatgcaggccagagaaggttgtgacggccctaagatccttcttgtagagtttggcactatactttttttcctgtacaagtcacaggtaaaagtttgactataagttacaagatatgcctaaatatgcctctaacatgcaaacagccgacggcaaaatcaatatcaggaagggatgggtaagttcaagaaattatagaactgttcttagttgagtttcctcttggttttacatattcacaagatctggtcgtttaggatgttacgttcctgtataaatgcagtgtgtatatatgcacttggtcacttggatataaatatcatgggtaaatatgtataaatgtatgtacaaccgcattttcattatcccccattcccccaatttcgttgttgtctacttgctttgcacactcgacaataagataattcctgtgacattttctggcgatgcgaagttgtacacttgtactccactccagccttaataaaaaaacatcactgagccatttttcccagctgtccaaatacatacttaaaacttttaggagatcatcataaggcatcaatccttaaggtttggatggatcgggttgggttgaactttttttttcaggatatttggtttgggaataggtggaaagagaataagagatggaccatgataggaaatatttccctaagattcaggttaactggtggatcaatccaatccactttttctctcgttaatgtgtgggtcaatgggtcatcccttaaatggtaggacttcatatattcaagctgcaggcatgctccacatttcgtattgatgctctgaattcaggcatataatcatgtagtagtttttaaattaaatttgacttaaacaatcatgtgtcctcatacaccaaatcctctaagcaagcagaaggcagaggaggactcattgatagtccaagcggagatgcatgagcatctgttacgcgcacagcaagccaggatcgaattgttccagctccgtttctgccggtataagattccctgatcccgactcctgcctgatcgtcggagattggcggcttcaggaagggggtccatttctgccagtcaagattccctgatccttcaggaagggggtcgccatgtcgagattgcttgccgcctcctagaggagccgcgagcccacgcagcagcatcgacagctccggcttgccggcgtatcaccattgtcgcacggcggctagggccagcgacagtagcggatgcagcaagcgagaccacgtacctgcgttggccgcggttttgcaaaactgtgttgtagggggttttcagaatttgggagacgacattaacggaatactgttccaacgaaatagctaatatttgcagc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0644600, RefSeq:Os04g0644600