Os04g0650000

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Revision as of 11:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0650000| Description = Similar to Oryzain alpha chain precursor (EC 3.4.22.-)| Version = NM_001060622.2 GI:297603471 GeneID:4337223| Length...")
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Gene Name

Os04g0650000

Description

Similar to Oryzain alpha chain precursor (EC 3.4.22.-)

Version

NM_001060622.2 GI:297603471 GeneID:4337223

Length

3817 bp

Definition

Oryza sativa Japonica Group Os04g0650000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33521686..33525502

Sequence Coding Region

33523940..33523966,33525008..33525457

Expression

GEO Profiles:Os04g0650000

Genome Context

<gbrowseImage1> name=NC_008397:33521686..33525502 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:33521686..33525502 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggatttccatggctctcgcggcggccgcgctgctgctgctgctgtcgctggcagcggcggacatgtcgatcgtgtcgtacggggagaggagcgaggaggaggcgcggcggctgtacgcggagtggaaggccgagcacggcaagagctacaacgccgtcggcgaggaggagcggcggtacgcggcgttcagggacaacctccggtacatcgacgagcacaacgccgccgccgacgccggggtccactccttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggcctcaggaacaagccgcggagggagaggaaggtcagcgacaggtacctcgccgccgacaacgaggcgctgccggagtccgttgactggaggaccaagggggccgtggctgagatcaaggaccaggaggttgcggaagttgctgggctttctcagcaatag</cdnaseq>

Protein Sequence

<aaseq>MRISMALAAAALLLLLSLAAADMSIVSYGERSEEEARRLYAEWK AEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRD TYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQEVAEVAGLSQQ</aaseq>

Gene Sequence

<dnaseqindica>1537..1563#46..495#ctcctcctcctcctcttcttggtcgtcttctcctagctcgccaagatgaggatttccatggctctcgcggcggccgcgctgctgctgctgctgtcgctggcagcggcggacatgtcgatcgtgtcgtacggggagaggagcgaggaggaggcgcggcggctgtacgcggagtggaaggccgagcacggcaagagctacaacgccgtcggcgaggaggagcggcggtacgcggcgttcagggacaacctccggtacatcgacgagcacaacgccgccgccgacgccggggtccactccttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggcctcaggaacaagccgcggagggagaggaaggtcagcgacaggtacctcgccgccgacaacgaggcgctgccggagtccgttgactggaggaccaagggggccgtggctgagatcaaggaccaggaggttgcggtaagcatccgttgatccttttcatgtctcctctcttcatttcagtttcaggggtaaaatatgtttcctttttacatatgaatcattttcgcggttagtttattcgggatgatcctcaagaaattattggtctgcttgcaacagttcagtagttagtactccacgtgaacataaattaggggcacatccaggtcaaacgataaatcaggacatgtttcaatatgccccaaaattaagcagaccggaaagggggggggggaattttcgatctgaatccagaatttgaagtacagtgtgattcacaaaatgaaattctttgaaattcaattgtttttatggtttgtgtagttggctatacacatggtcctcaaaaaaatatttggttgactaacttgattccagttgtgtactctgtatggagtatcactcaataatcggacacctttatttctgatctggaattatgaataagccagagcctgcaactgatcctgctgtttctgagtgtactctactgtggcttgtaggggaggcaggaaggcaagctataataaatggtcattcataaattgttttagttggaaaggtggatattttggttgtgggtgcatggacgtattagagccaaacagaaaatcatactgtgcattagtggtcactgtttgaattgtagctggtggagccacactagtggtcagctgtcatttggcatatggctccaaaagagcccttggaaacacctttcattcacgtctcttgcagacgtttcacaatcctattggtagaaggtcctcctttgcattgctaaagttcttcatcatgttgttgcttaaaaaagaaaaaagaaacttcgcactgtctgatgtaggtcgtttaaaaaaaaatgttgttgctccacatggtctatctaattcataattggctgcatttgttttgtattgcctcattatttacttgtatatttgagagtcaaacaatgtttcatgtcatcctttgacacaataatatggaaatataacctccaattctcctatattgcaggaagttgctgggctttctcagcaatagcagctgtagaaggcatcaaccagattgttactggcgacctgatatctttgtctgagcaggagctagttgactgtgacacttcatataacgagggatgcaatggaggtctgatggactatgcatttgatttcatcatcaacaatggtggaatcgacaccgaggatgactacccttacaaaggcaaggacgaacggtgtgacgtaaacagggtatctttcgtcttctttgctcccttggtttttcaggtagtagcataattttgatatgctattgctcacttgtgctgctatactcacagaaaaacgcaaaggttgtcacaattgacagctacgaagatgtaacaccaaacagtgagacgagtctgcagaaggcggtagcaaaccagcccgtcagtgttgcaattgaagccggtggcagagcattccagctctactcatcggtaagtcgatttaacgttattgttcaaattcgtttggtgatcctttgctaagttctaacaatgtgtagtcggtagtaagttttgctatctttgatagagaaacaaataggcaggctcactgattgcttttgcccttgcctgctttactttgctttaatcacggttattgcactaaaagaaatgattgtgttgtcagttgcaagtcgcaactactaagcaaatcttattatcattttgtccagtcctggcatactttgttaatttgttatcatccagataatctaatcccatttcagctttccactaaattagtacctcagtgcacaccatttattcatagaccataaaccatgttcatttgttgctttcctgcccctgctttgtgaaacacttttaatggaacgagtagcttttgatgtgttcccaggtccgtagtggagtggtatgagccatcatccagtgtcatccacttcgaaacccaattagatagggaaaaagattatgattgttttttcccataaagcaatactcaaatttgaaacatgcattgtactctgcttttgttaaataagttaatcctaaattccttgttcttttcaattatgttgttatttccatgacttgggcttgcactgattgccatttcctgatatcattcttagggtatcttcacgggtaaatgtggaacagcactagaccacggcgtcgctgctgttgggtacggcacagagaatggcaaggactactggatcgtgaggaactcgtggggcaagagctggggtgagtccggctacgtccgtatggagcgcaacatcaaggcgagcagtggcaagtgcggcattgccgttgagccatcctaccctctgaagaagggcgagaaccccccgaaccccggccctactccgccgtccccaaccccgcctcccaccgtctgcgacaactactacacttgccccgatagcaccacctgctgctgcatctacgagtatggcaaatactgctacgcctggggctgctgcccactcgagggcgccacctgctgcgatgatcactacagctgctgccctcacgagtaccccatctgcaatgttcagcagggaacctgcctcatggtaagcaattgcagagattggtaatttactagcactgttgcaagtgcaagaattccctgtgattcttactgttttgttgcttgatgaacacaacaggctaaggacagtccactggcagtgaaggctctgaagcgtaccctggcaaagccaaacttgtctttcttgtttggcaacggcaagaagagcagcgcttgagcaatttcagaaccgtatcagaccgtccagagccagcgtggttgcatcatcaaatgatcagctggtaactgacgaagacgattgcgcagctcggcggcgaaccctgcgcactaagtatatctgcttttataatagatttctcgtgtacataaaatctaaaaaaacgggttcagttggttacagaactgccaaatttgcttctgaatgtatatgtaaaattcagctaggtttgctcctaagctcctagatgccagttcgacggaactgcaaattgatattggaacaagataaggtcattgccatattaatccatcattcatgtattccataccaatatctcattcgcttgcagtgctgatgatcatgctcttgacttttggggtcttgccaatgagcaaaattatacttggcttccctcagaaacacatacatacacactccgttcccagttcatgtacaagcctaccctgatagctgttatccagatctgggctgtagttctgtgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0650000, RefSeq:Os04g0650000