Os04g0650500

From RiceWiki
Revision as of 11:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0650500| Description = Conserved hypothetical protein| Version = NM_001060626.1 GI:115460981 GeneID:4337227| Length = 2601 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0650500

Description

Conserved hypothetical protein

Version

NM_001060626.1 GI:115460981 GeneID:4337227

Length

2601 bp

Definition

Oryza sativa Japonica Group Os04g0650500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33545973..33548573

Sequence Coding Region

33546095..33546229,33546302..33546483,33546594..33546693,33546770..33546843,33547120..33547301
,33547381..33547451,33547708..33547791,33548226..33548279

Expression

GEO Profiles:Os04g0650500

Genome Context

<gbrowseImage1> name=NC_008397:33545973..33548573 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:33545973..33548573 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagatgaccagaagccttacgctcgtgccgctcccggcgacgctccggccggcatccgcggcctgtcgccggcggcggaggcggcgagggcttcccttcggtgcactcttctcaccatcgcctccttcgaaccagcagcagcaggaaatgcacatcagggcgctgcagccgcggcaggattgggtgggggagtgggtccggagcaacgacacgctagtccgcggcctgcccatcctcggcggcggcgcctccctgctcgccgtcctcctcaaccgtgcggtttccggcattgcagctgtcgccgacgcctccagttcgcagtcaagggctgacatactgactcttgctctctccgtaactgatattcttgctggccttgtttggttgtccatccggccgaaatccatttctcctgttgttcctcgaggtgtcgagtgcaaacgggtaggaacgggtgtattggactcggctcttcgtgaactactttggacatgggattcccttacaactgcaacttgttgcaaatccttggttgttgtgtatggaggtaattgtgttcttcaaattggggttgctgctggctctccagaggatggtaatgcagttatggtggatgcacagaagttcatgcaaggttccctttatagaagtgccatggaatccaagaagcaatcttacctagcaaatcttgccttatatcctggaaggactgaactaccattcttgccagctaacacgcaggccctaatattgcaaccaattggtgataaaggaattgcagttattggtggtgacactataagggggttcactaatcttgatcaggcatggattgcaatgatagcagataaactggatgctacattgtcaaagtcgtaa</cdnaseq>

Protein Sequence

<aaseq>MEMTRSLTLVPLPATLRPASAACRRRRRRRGLPFGALFSPSPPS NQQQQEMHIRALQPRQDWVGEWVRSNDTLVRGLPILGGGASLLAVLLNRAVSGIAAVA DASSSQSRADILTLALSVTDILAGLVWLSIRPKSISPVVPRGVECKRVGTGVLDSALR ELLWTWDSLTTATCCKSLVVVYGGNCVLQIGVAAGSPEDGNAVMVDAQKFMQGSLYRS AMESKKQSYLANLALYPGRTELPFLPANTQALILQPIGDKGIAVIGGDTIRGFTNLDQ AWIAMIADKLDATLSKS</aaseq>

Gene Sequence

<dnaseqindica>123..257#330..511#622..721#798..871#1148..1329#1409..1479#1736..1819#2254..2307#acatctcgcgcgcggcctccggtcgtcgtcgcgactccgctgccgccgtcgcccggcgccgccggtgatcccgctcatgtgctagtagaaggcgttcggagctctttgggagtgtcgcacgcatggagatgaccagaagccttacgctcgtgccgctcccggcgacgctccggccggcatccgcggcctgtcgccggcggcggaggcggcgagggcttcccttcggtgcactcttctcaccatcgcctccttcgaacgtatgtttcttcctcccccagctaattctgttccctgcttgaatgattcagtagttcgcaattcttcttcagcagcagcagcaggaaatgcacatcagggcgctgcagccgcggcaggattgggtgggggagtgggtccggagcaacgacacgctagtccgcggcctgcccatcctcggcggcggcgcctccctgctcgccgtcctcctcaaccgtgcggtttccggcattgcagctgtcgccgacgcctccaggtcatcctgtgggtgcagagccaccccaagaaatgcccccattttgcgctcgtcttggattggatttatgattactgaccaattggttaatttgatcttcatctcaatagttcgcagtcaagggctgacatactgactcttgctctctccgtaactgatattcttgctggccttgtttggttgtccatccggccgaaatccatttctcctgtgagttttttatcctttgcggcatattactgtagtaaattttttacaataattcctcattttgaaatgatcttaggttgttcctcgaggtgtcgagtgcaaacgggtaggaacgggtgtattggactcggctcttcgtgaactactttggtaaccattttactgatacacttcctgcttatttcaatcttaagatcttattttaattcatagagatcatggaagctcaaataatgaaatattattacttaaaaacctcgctaggtgttccataccgtgattctatataattactagtgctatgatcttccatgaacataactaaacaaatctttcagttttatgcatacacaatcccatccatgtacttcatgtcaaggaaattatgttgtgaggctggctgtgacttcaacttctcacaaataggacatgggattcccttacaactgcaacttgttgcaaatccttggttgttgtgtatggaggtaattgtgttcttcaaattggggttgctgctggctctccagaggatggtaatgcagttatggtggatgcacagaagttcatgcaaggttccctttatagaagtgccatggaatccaagaagcgtgagtgtcttttgttacttataaagttctttttttctgtttgatttcattcagaaacttcactttggtcttcttgcagaatcttacctagcaaatcttgccttatatcctggaaggactgaactaccattcttgccagctaacacgcaggtactaaaaaattctttcatcttagagaaattacatgtaagcacgcattggtgtgtttgtcaacttgttatacttcacgaaagctgatcataccatctttaaactaggaaactccagaatgcatcctctcttttgtttcattgaaaaagaagggggaaatcttattaagtctaaagatgactgcattcaacattcagatgaattaattgtatgaatgtttaaaaccaaagcttttgatatcttccctgatatacaggccctaatattgcaaccaattggtgataaaggaattgcagttattggtggtgacactataagggggttcactaatcttgatcaggtgctatttctaatctacagcctcataacatatatagtaccacgttttgttttgggtgattcgcacagataatacagagaaaaaccatctatatgtgtaagctaaagatcacagtttttaaaaaccaacacaagccaaaactaggtcaactaaatgcttaacattggttttatgctcacttttgctgaagcatacaatctctacggtgtgtgtttgcattggagcatttgaagtattgacggtgagatcttgcattatttgcattgcagctacattattgcttttgagagcacaaaagaccgaatgtaatgaaaagcctgttggttgtaggttgcacacttgcactgttttaaattcagtatgacggttactgtaaaaaaaaaatcagtatgacagtagagagacaaccattatcctgttgattttccttgcaggcatggattgcaatgatagcagataaactggatgctacattgtcaaagtcgtaagaacgcgtagtttgttggatattgtttgtatcttgcaattggccaaactgtcacgagagatgatcatctgtcactgtacatgttcaagttacaggtagagtttgcaaaaccaacggataaaacagtacagggctggggttgaccaattgttttaagccaggctgtatgattaggcttgattaagtttgaccagcatgaattgattacaatgttagttacttcttgtaaccagtcactgttggctgaatgaatcacattactgatgctttcatttgtaagatctcatcacatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0650500, RefSeq:Os04g0650500