Os04g0652400

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Revision as of 11:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0652400| Description = Similar to Sulphate transporter protein| Version = NM_001060633.1 GI:115460995 GeneID:4337235| Length = 5543 bp| De...")
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Gene Name

Os04g0652400

Description

Similar to Sulphate transporter protein

Version

NM_001060633.1 GI:115460995 GeneID:4337235

Length

5543 bp

Definition

Oryza sativa Japonica Group Os04g0652400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33613574..33619116

Sequence Coding Region

33613846..33613995,33614157..33614233,33614371..33614450,33614540..33614730,33614819..33615105
,33615231..33615357,33615514..33615630,33615721..33615834,33617545..33617610
,33617734..33617905,33618013..33618220,33618364..33618411,33618689..33619037

Expression

GEO Profiles:Os04g0652400

Genome Context

<gbrowseImage1> name=NC_008397:33613574..33619116 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:33613574..33619116 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggggatgcgtggagcttatggctacaatgacaacggcaacgagggtggcgtagtagttggagggggggaggcggaggcggagatcgcggcgatggcggtgctacacaaggtggcggcgccgccggcgcagagcacggcgagcaagctgaaggcgagggtgaaggagaccttcttccccgacgacccgttccgcgggttcaaggggaagccgctgacgaccaagtgggtcatggcggtgcagtacctgttcccgatcctcgactgggtgcccagctactccttctccctcttcaaatccgacctcgtcgccggcctcaccatcgccagcctcgccatccctcagggcattagctacgcgaagctggcgagcttgcctccgatcatcggcctctattcgagctttgtgccgccgatggtgtacgcggtgctggggagctcgagggacctggcggtggggccggtgtcgatcgcgtcgctgataatggggtccatgctgcggcaggcggtgagccccgccgccgagccgctgctcttcctccagctcgccttcacctccaccttcttcgccggcctcgtccaggcctccctcggcatcctccggctggggttcatcatcgatttcctgtcgaaggcgacgcttgtcgggttcatggccggcgcggcgatcatcgtgtcgctgcagcagctcaaggcgctgctcggcatcgtccacttcaccaccgagatgggcctcgtccccgtcatggcctccgtcatccaccacaccaaggagtggtcgtggcagacgatcctgatggccgtgtgcttcctggtgctcctgctcacggcgaggcatgtgagtatgaaatggccaaagcttttctgggtttcagcttgtgctcccttggcatgtgttatcgtctctaccctgcttgttttcctgttcaaagctcagaaacatggcattagcataattgggcagctcaaatgtggcctgaatcgcccttcatgggataaactactctttgatcctcaatatttgggcctcactgtaaagactggccttgtcaccggaatcatctccctaacggaaggagtggcagttggtaggacatttgcttcactcaaggactaccaggtagatggtaacaaagagatgatggccataggattgatgaacattgtgggctcatgtacatcatgctatgtaactacaggagcattctctcgttctgctgtgaaccacaatgctggttgcaagactgccatgtcaaatgtgatcatggcactgactgtcatggtcacactgttgttcctcatgccactgtttgtgtacacaccgaatgttgttcttggagcaatcataattgctgctgtgattgggctcattgatctccctgctgtatacaacatctggaagatggacaagatggatttccttgtgtgtctatgtgcatttgctggtgtaatcttcatctcagtccaacaaggccttgcaatagcggttggtatatcaatattcagggtactgttgcaaatcacaaggccaaagatgatgattcaagggaacatcaaaggcactgatatttaccgaaatcttcatcagtacaaggacgctcaaagagttcctgggttcttaatcctgacagttgaggctcctataaactttgcaaacaccaactacctaaatgaaaggattaaaagatggatagaagaagaaagttctgcaggaaccaaacaaagtgaactccatttcgtaattttggatctgtcagctgtccctgcaattgatacaagtggcatatcgttcctcatcgacttgaagaaatcaacagagaagcatggactagagcttatacttgtgaatccaactggagaggtcatggagaagatacaacgagcgaatgatgctcatggtcatttcaaatcagatagtctgtacttaaccactggggaagcagtggcttcactctctacattttccaagatgacagcgccttag</cdnaseq>

Protein Sequence

<aaseq>MVGMRGAYGYNDNGNEGGVVVGGGEAEAEIAAMAVLHKVAAPPA QSTASKLKARVKETFFPDDPFRGFKGKPLTTKWVMAVQYLFPILDWVPSYSFSLFKSD LVAGLTIASLAIPQGISYAKLASLPPIIGLYSSFVPPMVYAVLGSSRDLAVGPVSIAS LIMGSMLRQAVSPAAEPLLFLQLAFTSTFFAGLVQASLGILRLGFIIDFLSKATLVGF MAGAAIIVSLQQLKALLGIVHFTTEMGLVPVMASVIHHTKEWSWQTILMAVCFLVLLL TARHVSMKWPKLFWVSACAPLACVIVSTLLVFLFKAQKHGISIIGQLKCGLNRPSWDK LLFDPQYLGLTVKTGLVTGIISLTEGVAVGRTFASLKDYQVDGNKEMMAIGLMNIVGS CTSCYVTTGAFSRSAVNHNAGCKTAMSNVIMALTVMVTLLFLMPLFVYTPNVVLGAII IAAVIGLIDLPAVYNIWKMDKMDFLVCLCAFAGVIFISVQQGLAIAVGISIFRVLLQI TRPKMMIQGNIKGTDIYRNLHQYKDAQRVPGFLILTVEAPINFANTNYLNERIKRWIE EESSAGTKQSELHFVILDLSAVPAIDTSGISFLIDLKKSTEKHGLELILVNPTGEVME KIQRANDAHGHFKSDSLYLTTGEAVASLSTFSKMTAP</aaseq>

Gene Sequence

<dnaseqindica>5122..5271#4884..4960#4667..4746#4387..4577#4012..4298#3760..3886#3487..3603#3283..3396#1507..1572#1212..1383#897..1104#706..753#80..428#gcaacaacaactaagttgttggatagtaaaacctagctttgctatagcaacaacaacaacaacaaaaaatctctctcacatggtggggatgcgtggagcttatggctacaatgacaacggcaacgagggtggcgtagtagttggagggggggaggcggaggcggagatcgcggcgatggcggtgctacacaaggtggcggcgccgccggcgcagagcacggcgagcaagctgaaggcgagggtgaaggagaccttcttccccgacgacccgttccgcgggttcaaggggaagccgctgacgaccaagtgggtcatggcggtgcagtacctgttcccgatcctcgactgggtgcccagctactccttctccctcttcaaatccgacctcgtcgccggcctcaccatcgccagcctcgccatccctcaggcaatgatataatcttcgccttgattcctttccgtttcctgtgcatgcactccatgtgttcgacgaaacagctagctgcatcatatcgatccttgcgtgtgaatgtttgtctttgatttttcttttcctttttttttttggaagtttgtaggatcattttggtaacatcctggtcatgtacagatacacaccaactgtactccttaattactggctttgcatgtacagcgtgatttttaaccagcattcatggttgctgattaactcgatcttgcagggcattagctacgcgaagctggcgagcttgcctccgatcatcggcctctgtacgtgctagcttgttcacacgctttctttctttccttccatgcatgcgtgtgcatgcaaatatctttgattattagtaaatggacaatggttaggtgattagctagtggtaattaactaattattgatggttattgtgtagattcgagctttgtgccgccgatggtgtacgcggtgctggggagctcgagggacctggcggtggggccggtgtcgatcgcgtcgctgataatggggtccatgctgcggcaggcggtgagccccgccgccgagccgctgctcttcctccagctcgccttcacctccaccttcttcgccggcctcgtccaggcctccctcggcatcctccggtgatccatccatccatccatccatggctagctgcatgttcctgctcattgatgccgaattgaagcatggttgcatgatgtgatctcatcttgatggatggatgcaggctggggttcatcatcgatttcctgtcgaaggcgacgcttgtcgggttcatggccggcgcggcgatcatcgtgtcgctgcagcagctcaaggcgctgctcggcatcgtccacttcaccaccgagatgggcctcgtccccgtcatggcctccgtcatccaccacaccaaggaggtaactaatgatgtcgcaattgcgcatccataacgtcgccggcgccgccgccgccgccgcgacggcgagctaagtgactgtatgactgaccaatcgatcgatcgatcaccgtgctttgtgcagtggtcgtggcagacgatcctgatggccgtgtgcttcctggtgctcctgctcacggcgaggcatgtggtacgtatcacatcacactacacacgcgtctactccttttgactgccgttgactgatgtctacgtcatgttattctctgattattactattattgttatttgtttttgcaatatttcttccttcgaaaaagaataaatgttcagctagctagccactgatgacacgcatgtgtggtgctgatcatagcaggggctatattagcggcggttttggcgtttctcttggacatgtttcgattcgcttcgtctgtagtacgcaggatatatatatagcttcgtatatatgttgtcgctatcgataatcatgcagccgggtgaagtcaggcatgaaatgatgcatatatatggccgacgatccatcctttggaaggatgtgcgtgcctttcttgatcaatttggtcacggacatggatctctctctgcaggttgttgcatgcatgtatgggtccatgtctagctagtctttttattttgacagtccaagctaagtacagtattttagtaattaccagcaacttgttgcagtaaaagtaacatgtcaaaagtcattagaaaattactggacttaattatttggtcaaaggaaatgtagtattaatgttcgtttgggctgcgcctttttcagatggttcatttgttctgttttttgaaaaaaaaaattatatttgttctgttggtgcatgcacacaattcagtattctgaaccttgcaaccatgctgatagagaacactactgctagttacgttgaagatagtgagtattaggtggtggtggttgcagaacactattgcgaaagggcacgaatagtagttgcagtgaccttagtagcactctaaggtcctgagtttaatcctctataggaacgaatttcagattaagttatttgaggtgttaagttttcaatttaaaaaagctacatatatccggttggatataaaggttgggtaaaaaatactctttaaaaaaaggtggtggtggtggccagcactcgtcatacatacatatgcccccaataatcaactcaagcattgtttagttcccaactttttattcaaacttccaactttttcatcgcatcaaaactttcctactcacaccaacttccaacttttttgttcaaacttccaatttcagtcaaactttcaattttgatgcggaactaaccacagcctcagcatgcacggttttttttgaaagaatgtaagcctgtaaggctgtaactagcaaattaaacagtccgtaggttctgactggaaggctacaaatggagcagcccaagacgaaataatgcaaccgacactgatctatgctactagctccagaggaatagtgttgggcctctcaaggccacatggccacattggttttgaccctggaagaactgaacagatcttgcaggtagtacataagggaggaaaagggacgaaatttacacgatccaacatccctctcctgaaaacctacagtctctgtctctctgatatgtgatatctgcccagtgctctgtagactgtacttctttattctgctatatttctcgggccatggagttattctcccaaaaaacagatgtagtgttcaatattctgaaaatgaggatggtggtagtatcagtgaaaagttcatttcagaaactgaaatcaagtacattttatttttgcactcgttaattctaactcctgcacaaattctatcttctgtgtatgcagagtatgaaatggccaaagcttttctgggtttcagcttgtgctcccttggcatgtgttatcgtctctaccctgcttgttttcctgttcaaagctcagaaacatggcattagcatagtaagaaacctgaaacaactgtaaattactgcattagtattttcttagttgtaacatattaataaaaaaatgcctatcttttccctgcagattgggcagctcaaatgtggcctgaatcgcccttcatgggataaactactctttgatcctcaatatttgggcctcactgtaaagactggccttgtcaccggaatcatctccctaacggtatgtctgtcataaattttaccattttaactgtgtttttccatgggaaaattaatgtatcccatgatgctatctgaacttgacaccccatatatgttcagaatcttgtgccatagtatcagtactattcagataacacttttcactatttaccaggaaggagtggcagttggtaggacatttgcttcactcaaggactaccaggtagatggtaacaaagagatgatggccataggattgatgaacattgtgggctcatgtacatcatgctatgtaactacaggtacatccctgaaccaatctttaatcctagtttcatcaccattcacaaggatagaaagaatgatttccgttcaaaaaaaaaaaggatagaaaggatgatggtctctcttatttaatttccatcaggagcattctctcgttctgctgtgaaccacaatgctggttgcaagactgccatgtcaaatgtgatcatggcactgactgtcatggtcacactgttgttcctcatgccactgtttgtgtacacaccgaatgttgttcttggagcaatcataattgctgctgtgattgggctcattgatctccctgctgtatacaacatctggaagatggacaagatggatttccttgtgtgtctatgtgcatttgctggtgtaatcttcatctcagtccaacaaggccttgcaatagcggtaaccaataaaactgacaaagctaattattccatagagtaagttgcagctttacttgcttactgattaaaattctcaaattttgcaggttggtatatcaatattcagggtactgttgcaaatcacaaggccaaagatgatgattcaagggaacatcaaaggcactgatatttaccgaaatcttcatcagtacaaggacgctcaaagagttcctgggttcttaatcctgacagttgaggctcctataaactttgcaaacaccaactacctaaatgaaaggtaaaacgcacttctaggaaaagaaataaatactagaaatcaaagttctgaaaagtggataaatatatctgcaatgtttctgtttgtaggattaaaagatggatagaagaagaaagttctgcaggaaccaaacaaagtgaactccatttcgtaattttggatctgtcaggtttgttacttcgaatgaaactttcatccactttattttgttagtatgttcctttcaaatgcaagatcaggtcataccagagtctagtacaaaggcttctcagctgtactaacacatcataaaactatccttctcagctgtccctgcaattgatacaagtggcatatcgttcctcatcgacttgaagaaatcaacagagaagcatggactagaggtatatactctaatttcctaaaacataaacacagttttggggcacaaacaaaacccccttcttcttcttaatgaaatttggtcgaccgaatccttcggctgacccggcaaaaaaaaaaaagttatgtggcatagtaaaccccctttattttatttttgcagcttatacttgtgaatccaactggagaggtcatggagaagatacaacgagcgaatgatgctcatggtcatttcaaatcagatagtctgtacttaaccactggggaagcagtggcttcactctctacattttccaagatgacagcgccttagagctgattctaaggttgtcattttcattattattctaactgcgctgctaagtttgcaatgcaagattttccaccctgttctctcagcaatagaagtgcctccagcaacgtatttcccggttatgtttgtacccccaatcttccgaggtattcagactatgtgatgcaaacttggcagtagaagtactgagaatatgtaccttgtgcatacccatcagtatttgtctacatgagggcaaacacaccaacagtacagaatatatagtaattctc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0652400, RefSeq:Os04g0652400