Os04g0652500

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Revision as of 11:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0652500| Description = Conserved hypothetical protein| Version = NM_001060634.1 GI:115460997 GeneID:4337236| Length = 4382 bp| Definition ...")
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Gene Name

Os04g0652500

Description

Conserved hypothetical protein

Version

NM_001060634.1 GI:115460997 GeneID:4337236

Length

4382 bp

Definition

Oryza sativa Japonica Group Os04g0652500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33624352..33628733

Sequence Coding Region

33624352..33624705,33624808..33624855,33625107..33625232,33625486..33625536,33625599..33625691
,33625853..33625908,33626101..33626158,33626942..33627001,33627149..33627259
,33628004..33628585,33628662..33628733

Expression

GEO Profiles:Os04g0652500

Genome Context

<gbrowseImage1> name=NC_008397:33624352..33628733 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:33624352..33628733 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggctggatctcctccaagctcaaggccgccgagaccctcctccaccaagcaagccccccccccccgatcgaccagcaggcggcggagtccctcggcaagtccccgtcggcctccgacctcaccgcgctgcacgcctcctcctcctcctccgccgccgacgccctcctcgacgccccgacgcggaggcagccgccggtcgccccgcctccctccctcggcctccgcctcgccgcgaggcgccccaacctgcctccgcctccggctcctgctcccgcttcccctgccccccgccgctccgcctccgcgactgcggttctcgctgcccaggatcgcgcggcgggtgctgctgtggggggcgtggccgaggctaaggtggggggagatcgggaggaggacaaaggcggcgggtcggagagcgggagcgggagcgatgaggacgactcggatgggtcgggcagcgacgactcggaggactcggaggaggagaggcggagggaggaggagaggaggcggcggcgggcggagcggctcgcggcaatggcggcgcgagcgatcgcggagagggaggaggcggtggcgaagctcgagggggagaaggccagccttgagaagctgctcgccgagcgcgagaaggagcaggcacaggaggcttcagagttgcagaatagcatgattgaaactatggaggctgtggagatggagaaacagcgacaccacagcactagaatggaagcccttgcacggttggctaagcttgaggttacaaatgcagagcttgcaaagtcacttgcgagggaacagtggaacctggatcttcaagttgatcaggtggcacaacttcgagaggaagttgatatgaagactcttactcaagataaatataagagaaagatagcaaagatgcagaagactagcccccttttggttaatgaaatagaatcgttgagaaggttcaagctggaagaagaaatgattgatgcagagtatgctctaacatgtgatagaatcgtcaacttgaaagacaaggacttatctttctttgtgcttttggtgataattgtgctgtgccttagcatggcaaggaagattaaagaaaacattgagctgacaaaaagaagaatggtgcatcctacagaagtggaaattgaactcaagaagagacttgatcaactcactgatcgtttaattcagaaacagatgcaggttgagtccctctcttcagagaaagcagccttgttactgagaatagaggcagtttcaagatcgcttgacaataacggatcatcatcgttggcttattcgagctcctcgtcaaagatagatatcgaagctggtacatggcaagaatcacacccgccaaggttgcgtgacaggatacggaatggacagcggcaactgggatcggcaatccgacagctcgattccatcttctccgctggccatatcttcttgaggcggaatcctaaggcgctagtttgggccatggtgtacctggtgtgcctccacatatgggtcctgtacatactaacgtcacatccgacaatatcagaagctcgccctggtgctacattttcgttggagtcattaaacaagactggtatttaa</cdnaseq>

Protein Sequence

<aaseq>MAGWISSKLKAAETLLHQASPPPPIDQQAAESLGKSPSASDLTA LHASSSSSAADALLDAPTRRQPPVAPPPSLGLRLAARRPNLPPPPAPAPASPAPRRSA SATAVLAAQDRAAGAAVGGVAEAKVGGDREEDKGGGSESGSGSDEDDSDGSGSDDSED SEEERRREEERRRRRAERLAAMAARAIAEREEAVAKLEGEKASLEKLLAEREKEQAQE ASELQNSMIETMEAVEMEKQRHHSTRMEALARLAKLEVTNAELAKSLAREQWNLDLQV DQVAQLREEVDMKTLTQDKYKRKIAKMQKTSPLLVNEIESLRRFKLEEEMIDAEYALT CDRIVNLKDKDLSFFVLLVIIVLCLSMARKIKENIELTKRRMVHPTEVEIELKKRLDQ LTDRLIQKQMQVESLSSEKAALLLRIEAVSRSLDNNGSSSLAYSSSSSKIDIEAGTWQ ESHPPRLRDRIRNGQRQLGSAIRQLDSIFSAGHIFLRRNPKALVWAMVYLVCLHIWVL YILTSHPTISEARPGATFSLESLNKTGI</aaseq>

Gene Sequence

<dnaseqindica>4029..4382#3879..3926#3502..3627#3198..3248#3043..3135#2826..2881#2576..2633#1733..1792#1475..1585#149..730#1..72#atggccggctggatctcctccaagctcaaggccgccgagaccctcctccaccaagcaagccccccccccccggtcccccacctcaccttcgctcgctccccctcaaccccactaacccctcttcttcttcttcgctcgtgtcgcgcagatcgaccagcaggcggcggagtccctcggcaagtccccgtcggcctccgacctcaccgcgctgcacgcctcctcctcctcctccgccgccgacgccctcctcgacgccccgacgcggaggcagccgccggtcgccccgcctccctccctcggcctccgcctcgccgcgaggcgccccaacctgcctccgcctccggctcctgctcccgcttcccctgccccccgccgctccgcctccgcgactgcggttctcgctgcccaggatcgcgcggcgggtgctgctgtggggggcgtggccgaggctaaggtggggggagatcgggaggaggacaaaggcggcgggtcggagagcgggagcgggagcgatgaggacgactcggatgggtcgggcagcgacgactcggaggactcggaggaggagaggcggagggaggaggagaggaggcggcggcgggcggagcggctcgcggcaatggcggcgcgagcgatcgcggagagggaggaggcggtggcgaagctcgagggggagaaggccagccttgagaagctgctcgccgagcgcgagaaggagcaggcacaggaggtgagttcgattcatggcgatatcatcacgcttgcttgtgcaaatttcagagatctcgtaaacatgatgatatactctggtactcaatgatcggaggtaacagagaatgttctaatgcattagcacaacattttcctctgagagtaattcgcagaacgtttgggtcagtagtgattctagcggactttgctttgtagtcatgcgggatcaagtttgcttaggttgggttggatggcacagcgactttgtgtgcaggaagccacaccaatcgatctgacattttatcatgaaatatattgcttgctacagcaactttgtgttgatctcagcaatggcactgagcaccctaggcatatcccttgtttttcaccgaaggcagcaatgaaattagtgcagtaactttagcatcccatgcaatcaagtagttgtaccgagatcatgatttgcaacttaaaattgtagttatgcttgactttcttttgttacttctattccattcatgttttggtttttagcagtgtcaatgtgtaaaccattatttgtgttgctttcgttttactgcccagagtcatcatctacttggatgatcattgcacagctcatgctgttcatcggttattggttcatgttctgttccctcttgtgattcttgtcatttggtgagacagagctgactgctcaattttcatgtatcttgcaagattgattagcattgttttcaacacttattgtgtttaatttcaggcttcagagttgcagaatagcatgattgaaactatggaggctgtggagatggagaaacagcgacaccacagcactagaatggaagcccttgcacggttggctaagcttgaggtaccacgactctgctgcattaccttccctcttgtcctagattactatgagtaacgcgatacttagtattttactttgtggtagacaaatagcatttgacctcaactgtcaacacttgagcagtgatctcacctaatatctttgcaggttacaaatgcagagcttgcaaagtcacttgcgagggaacagtggaacctggatcttcaagtatgcaatatgttccctttcctgtatgtttctctaggtcatttgttgaactagtaggtatcttgttattatttattttccagtttcttgcagtgccacttgtttagaagtgttctttcttagtcaaggggaagtacgttaactgctgctacagtgatacatacaagctgccttcatatatatacagttgtgtggagcaccatattttgctatgcttggctgcttttcataataaattcaaagcagtacaatattttggggccaggacaataaagtaatatctggggattagttacagttagctaatgacttatacatgccttactgccaaatgctttaagatttttggattcttattttagtcctttatgaatacacatgtatatagtcttggtattgagtaacagattgggtagcaggtataagtgcccagtccactagtccagaccagcattgacttattatgtgcttcccttatatatttggatattaatgtcctccactccgtagtgcctagattggtggtttctgtaatacttgagacatgattgatatactctggaattagcagtcgaaatgatcatactttacacctatgaaaaccacaaatgcaatttgatatttttgttttgcctactatcactagaggtaggctactgcctagccttggtaacattgagttgtttcagttgatacttgacagttgctgcacaagttatgagatgctataccaatcataaaaatggaatttaaaaaatcatggtattcttgatatttaactaggttgatcaggtggcacaacttcgagaggaagttgatatgaagactcttactcaagatagtaagtccattgtggttttgtttctcattcttatggtagttttgtgtcatgtcgactcatttttttagctctgtcgaacacttggactaatgtgtgacattgcattcttttttagagaatcataccatcaatccatcatctaaagcttcttttttcaaatatgtgaccttttttttatcattatatgagcagaatataagagaaagatagcaaagatgcagaagactagcccccttttggttaatgaagtaagcaaatgtgttgcattttgttttgtttgcacttattactgtacagatttttttcatataatgtttgttagttcttaagcccttctaatcatatggttgacctaagagcaaagtctccttgtcccttctatttgtaacttcattgaacttttgtctagatagaatcgttgagaaggttcaagctggaagaagaaatgattgatgcagagtatgctctaacatgtgatagaatcgtcaacttgaaagacaaggtagattattctgactataactttaatcattagcattatgttgtgtttttttatgttaccaggacttatctttctttgtgcttttggtgataattgtgctgtgccttagcatggtacttttctggattcctttcatggagtcccaactaactcacttttataagtcccatgtgatattgtttggacattttggtcaacgatctttatgttatttcattactgcacatatgatgcattagatcatttgaaaagggttggggaataaataataaactggatgtaagggcattcttgtctaccttttctagatgcactatttgtgcatgggttgagtgcaccacctgaccactttttatttgtttataggcaaggaagattaaagaaaacattgagctgacaaaaagaagaatggtgcatcctacagaagtggaaattgaactcaagaagagacttgatcaactcactgatcgtttaattcagaaacagatgcaggttagttgcttggatgttcccacttgttatgtcacatcccgcgttaaatttctgattagcaatagataatatttatgttcttacagcatgtcccattgaaagtgaaccaaagaatcctcaaacatgaaagcggctaccatctgacagcaaaatgttgttatctgcttgtagaaaccagtgtttctgtctcttctctacaatgtgctgcattcttgtgaaacgatgatgagacctaaacggttttctttcaggttgagtccctctcttcagagaaagcagccttgttactgagaatagaggtctgtatctgcaaaccgctgtctttgcttcaatacaagaaatgtattggtatattcctatcaattttcccggttaaatgtattgttcattatcatctgcaggcagtttcaagatcgcttgacaataacggatcatcatcgttggcttattcgagctcctcgtcaaagatagatatcgaagctggtacatggcaagaatcacacccgccaaggttgcgtgacaggatacggaatggacagcggcaactgggatcggcaatccgacagctcgattccatcttctccgctggccatatcttcttgaggcggaatcctaaggcgctagtttgggccatggtgtacctggtgtgcctccacatatgggtcctgtacatactaacgtcacatccgacaatatcagaagctcgccctggtgctacattttcgttggagtcattaaacaagactggtatttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0652500, RefSeq:Os04g0652500