Os04g0652700

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Revision as of 11:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0652700| Description = Similar to Nuclease I| Version = NM_001060636.1 GI:115461001 GeneID:4337238| Length = 2653 bp| Definition = Oryza s...")
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Gene Name

Os04g0652700

Description

Similar to Nuclease I

Version

NM_001060636.1 GI:115461001 GeneID:4337238

Length

2653 bp

Definition

Oryza sativa Japonica Group Os04g0652700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33652454..33655106

Sequence Coding Region

33652480..33652599,33652685..33652856,33653769..33653861,33653968..33654107,33654216..33654308
,33654405..33654472,33654563..33654631,33654742..33654859

Expression

GEO Profiles:Os04g0652700

Genome Context

<gbrowseImage1> name=NC_008397:33652454..33655106 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:33652454..33655106 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcgcgcgtgctccccctcctcctcgtcgtcgtcgtcgccgcggccatggcgagagcccccacggaccacgcgtggggcaaggagggccactacatggtgtgcaagatcgccgagggtttcctgacgaaggaggcggcgacggcggtgaaggagctcctccccgggtgggccggcggcgagctcgcggaaacgtgctcgtgggcggacaccgagcggttccggtaccggtggtcgagccccctccacttcgccgacacccccggcgactgccagttcaactacgcccgggattgccacaacacaaacggtgagaaggacatgtgtgtggtcggagcgatcaacaactacaccaacgcgctcgaggactcatcaagtccatatgatccaaccgagagcttgatgttcttggcacacttcgtcggcgacgttcaccagcctctccactgcggccacgtcaaagatcttggtggcaacaccatcatcgtccattggtacacaaggaagagcaaccttcatcacgtgtgggatgtgaacgtcattgaaacggccttgaaggaattctacaacgaggacgtgagcacgatgataaaggccatcaagatgaacatcactgatgagtggtccaccgaggagaagcagtgggagacttgccgtagccggacaaagacttgtgccgataagtacgccgaggagagtgcaaagctcgcgtgcaaagcgtacgagggtgttgagcaagaatccaccttagaagatgactatttcttcgctgccctgcctgttgttcagaagaggattgctcaaggtggcgtgaggcttgctgcaatactcaaccggatcttcagcgggaacaaggttcagagtagttga</cdnaseq>

Protein Sequence

<aaseq>MAARVLPLLLVVVVAAAMARAPTDHAWGKEGHYMVCKIAEGFLT KEAATAVKELLPGWAGGELAETCSWADTERFRYRWSSPLHFADTPGDCQFNYARDCHN TNGEKDMCVVGAINNYTNALEDSSSPYDPTESLMFLAHFVGDVHQPLHCGHVKDLGGN TIIVHWYTRKSNLHHVWDVNVIETALKEFYNEDVSTMIKAIKMNITDEWSTEEKQWET CRSRTKTCADKYAEESAKLACKAYEGVEQESTLEDDYFFAALPVVQKRIAQGGVRLAA ILNRIFSGNKVQSS</aaseq>

Gene Sequence

<dnaseqindica>27..146#232..403#1316..1408#1515..1654#1763..1855#1952..2019#2110..2178#2289..2406#aaacagagcagagaagcagagcaaccatggccgcgcgcgtgctccccctcctcctcgtcgtcgtcgtcgccgcggccatggcgagagcccccacggaccacgcgtggggcaaggagggccactacatggtgtgcaagatcgccgaggtgagagatcgatcgatcgagatggattccacctcgtgctttgcgcttgcttgattggtggggaactttgggtttgcttctgcagggtttcctgacgaaggaggcggcgacggcggtgaaggagctcctccccgggtgggccggcggcgagctcgcggaaacgtgctcgtgggcggacaccgagcggttccggtaccggtggtcgagccccctccacttcgccgacacccccggcgactgccagttcaactacgcccgtataatctcctcctcctcccctgattagcattgcagtttcagtttcagtttcagatttccaagtagatcgattagctgtcgcagctgattagcagttggataggttgatagaaacctgacatgtgtctgatgacaagttgctgtcataatgagtatagtaagcaacctcgttggagcatcttgatgatgcttagtagcttcttggtccggttaacagccggccagttggagcccatcggttggcttattcgtgcagcatatttaataatttgtgaataaacttttatttatatgtttttagcgaacggaaaataatttgtgaataaaacttttatttacgtgttcctagcgatctaaaagagataaacttcgatgaaaaaaaccttaaaatcaactccgaatttaaggttgaaaatttaaattttggctcataagaataagtacaagcaaaaaaaatgagacggcagtttggactgccaaactcgacaggatgcgtctaagtataggttgcgtcttgcttgtttgattgggcaaagcaaaggcaagctcgttaggctcgtgtagccgtcgtccatatagatggcatgacattgtgctggacagaaaaaagggaactagtctgaactctgaagcctctgtttgttcctgggatcagtggtaaccgtttgcctgaattatctgttcatgcaatgattgataaaacgcttagaaccatcatgtatgggtatggctatggtagttgaactgttaaagtccataaaaggggtcaaacttagattaagaacaaaaacgaatcgaatgcaaactgtatcaaaaattcagggtgctgtcttactctcttatgcctagtgcgctgaattttgagaaaatgagtaaatgatgagacgcgtgattgtgccatttctgcgcaggggattgccacaacacaaacggtgagaaggacatgtgtgtggtcggagcgatcaacaactacaccaacgcgctcgaggactcatcaagtccatgtaagcatcactagtcacacttctgctcctgtctgtattttcagctgtaatgaagtaataaactgaacacatggcatctcacatgtttgcttgtgataactttcagatgatccaaccgagagcttgatgttcttggcacacttcgtcggcgacgttcaccagcctctccactgcggccacgtcaaagatcttggtggcaacaccatcatcgtccattggtacacaaggaagagcaaccttcatcacgtacgtagagcctaacacagatcgaattaatccattaataatttatccaattttgttctttgtgaacagctaacttaatcttagcattgtaaacttgtatcgtttcaggtgtgggatgtgaacgtcattgaaacggccttgaaggaattctacaacgaggacgtgagcacgatgataaaggccatcaagatgaacatcactgtgagcaagctcgacacttcactgccttgagctgcatttcagttttctcctcatctgtagactgtagtggttttgattggattttatgccgtgcaggatgagtggtccaccgaggagaagcagtgggagacttgccgtagccggacaaagacttgtgccgataagtaagctcatggcctgcatgaatgcatgattttggctgaatcgaactgaaatataaatattcagagattgacagctgaaagcaaatgcaggtacgccgaggagagtgcaaagctcgcgtgcaaagcgtacgagggtgttgagcaagaatccaccttagaaggcaagttcttcaaaacaccaaacttgctttcacacattcttaatgactgatttgtgatgccattaacattaagagcaatttgatgtgatgcttgttcttgaaaactgcagatgactatttcttcgctgccctgcctgttgttcagaagaggattgctcaaggtggcgtgaggcttgctgcaatactcaaccggatcttcagcgggaacaaggttcagagtagttgatccaatagagattaaacagatgaaagattaagaaaatagcccgcattctgaattacaataagattatcttgtttgaccatgttaacttcacggttacgattagatgtatcctcatttagccatttgtcaaagtagcttagatagctacagaacattgtaattcctgtaagcaagtggtgatttatcaatattgcactgtctttttgtatcattgatcatctttcaggctgaagttaagctacagccg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0652700, RefSeq:Os04g0652700