Os04g0655000

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Revision as of 11:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0655000| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001060648.1 GI:115461025 GeneID:433725...")
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Gene Name

Os04g0655000

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001060648.1 GI:115461025 GeneID:4337251

Length

2445 bp

Definition

Oryza sativa Japonica Group Os04g0655000, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33805896..33808340

Sequence Coding Region

33805896..33808340

Expression

GEO Profiles:Os04g0655000

Genome Context

<gbrowseImage1> name=NC_008397:33805896..33808340 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:33805896..33808340 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtcgtcgaatccatggcatgtgcttactcgtcctagccaccttcctctcttgcattgctctctcggcgggtgatcaccggagcgttctgtggcgcggcggctccatcgccgtggaggacgccgccgaaaacgtcctcgtgtcgccgagcggcaacttctcgtgcggcttctacaaggtggcgaccaacgcctacacgttcgccgtctggttcaccgcgtccgccgacgccaccgtcgcgtggacggccaaccgcgactcccccgtgaacggcgtcggctcgcgcgccgagctccgcagggacggctcgctggtgctgcaggactacgacggccgcgtcgtgtggagcaccaacaccagcggcacgccggccgaccgcgcccagctcctcgacaccggcaacctcgtcgtcgccgacgccgccgggaaccggctgtggcagagcttcgactggcccacggacacgctccttgccgggcagcccgtcacgcggtacaagcagctggtgtcggcgtcggcgaggggcttgccgtactccggctactacaagttctacttcgacagcagcaacatcctcaacctgatgtacgacgggccggagatcagcagcaactactggccgtcgccgttcaacaagtggtgggacaacaaccggacggcgtacaacagcagccggtacggcagcttcgacaggcgcggcgtcttcacggcgagcgaccagctgcagttcaacgcctccgacatgggcgacgagggcgtcatgcggcggctcacgctcgactacgacggcaacctccgcctctacagcctcgacgccgccgccgggcgctggcacgtcacgtgggtcgccgtcgggaggcagtgctacgtgcacgggctgtgcggcagcaacggcatctgctcgttccgtcccgggccgacgtgctcctgccccgtcggctacgtgcccaacgacgcgagcgactggagcaagggctgccggcgctcgcccgacgtccggtgcggcggcgacgacgtcgtcgacttcgtggagatgccgcacaccgacttctggggcttcgacgtcaactacaccgccggcgtcacgttcgacgcgtgccggcggctctgcctcgacgactgcaactgcaaggcgttcgggtacaggccgggcaccggcaggtgctaccccaagatcgctctctggaacggccggattccgatcaagcccgaccaaaccatctacctcaaagtcgctaggagtgtcaagaaccagatgatcaaccagtcgtcgtcatttctgcacttcgatggacacgcctgcaccgtggacgaacgggacgctagcgtcggcagctcgtacctgcatggcaggagcaacgagataaacttcatctacttctacagcttcctcgcggtcgtgttcgtcgtggaggccattttcgtcgtcgtgggttacctgtttgtcttccgagctgacccggtggcggcaggacgggtccgtgacgacgggtacagcttggtgttcagccatttccggaggttcacctacgacgagctgtcagacgcgacgtgcgggttcagagacgagattgccaagggcgggacgggatccgtgtacaagggcgttcttgaggatggccggagcatcgccgtgaagcggctgggagagctgacgcaagccgacgaggtgttccggtcggagctgagcgtcatcgggcggatcaaccacatgaacctcgtcaggatatggggcttctgctcggagcacccgcaccgcctcctcgtctccgagttcgtcgagaacggctcgctcgacaaggccctcttctgcgacgacggcgagagctccggtgtggtggtgttaccatggcggtcgaggtacaagatcgccgtgggcgtcgcgaaggcgcttgcgtacctccaccacgagtgcctggagtggatcgtgcactgcgacgtgaagccggagaacatcctgctcgacggcgacttcgagcccaaggtgacggacttcggcctcgtcaagctgctgagccgcgacgccggcagccacatggcgctgtcgcgggtgcaggggaccagaggctacattgcgccggagtgctggacggtgggccgcccgatcaccggcaaggccgacgtgtacagcttcggcgtcgtgctcctcgagctgctcagggggcagagggtgtgcgactgggtggcggcggcggacggggcctgggatctccagcggctggccgcgtggctcaaggagaagctgaagcgcgacgacgacgaggaggaggtgtcaacgtggctggaggagctcgtggatgcacggctgcgcggtgatttcaaccatgtgcaggcggccgcgatgctggagctggcagtttgttgcgtggacggtgaaccaaacaggaggccgagcatgaacgccgttgcgcagaagctcctctcgctgcatgatactcgctag</cdnaseq>

Protein Sequence

<aaseq>MSRRIHGMCLLVLATFLSCIALSAGDHRSVLWRGGSIAVEDAAE NVLVSPSGNFSCGFYKVATNAYTFAVWFTASADATVAWTANRDSPVNGVGSRAELRRD GSLVLQDYDGRVVWSTNTSGTPADRAQLLDTGNLVVADAAGNRLWQSFDWPTDTLLAG QPVTRYKQLVSASARGLPYSGYYKFYFDSSNILNLMYDGPEISSNYWPSPFNKWWDNN RTAYNSSRYGSFDRRGVFTASDQLQFNASDMGDEGVMRRLTLDYDGNLRLYSLDAAAG RWHVTWVAVGRQCYVHGLCGSNGICSFRPGPTCSCPVGYVPNDASDWSKGCRRSPDVR CGGDDVVDFVEMPHTDFWGFDVNYTAGVTFDACRRLCLDDCNCKAFGYRPGTGRCYPK IALWNGRIPIKPDQTIYLKVARSVKNQMINQSSSFLHFDGHACTVDERDASVGSSYLH GRSNEINFIYFYSFLAVVFVVEAIFVVVGYLFVFRADPVAAGRVRDDGYSLVFSHFRR FTYDELSDATCGFRDEIAKGGTGSVYKGVLEDGRSIAVKRLGELTQADEVFRSELSVI GRINHMNLVRIWGFCSEHPHRLLVSEFVENGSLDKALFCDDGESSGVVVLPWRSRYKI AVGVAKALAYLHHECLEWIVHCDVKPENILLDGDFEPKVTDFGLVKLLSRDAGSHMAL SRVQGTRGYIAPECWTVGRPITGKADVYSFGVVLLELLRGQRVCDWVAAADGAWDLQR LAAWLKEKLKRDDDEEEVSTWLEELVDARLRGDFNHVQAAAMLELAVCCVDGEPNRRP SMNAVAQKLLSLHDTR</aaseq>

Gene Sequence

<dnaseqindica>1..2445#atgagtcgtcgaatccatggcatgtgcttactcgtcctagccaccttcctctcttgcattgctctctcggcgggtgatcaccggagcgttctgtggcgcggcggctccatcgccgtggaggacgccgccgaaaacgtcctcgtgtcgccgagcggcaacttctcgtgcggcttctacaaggtggcgaccaacgcctacacgttcgccgtctggttcaccgcgtccgccgacgccaccgtcgcgtggacggccaaccgcgactcccccgtgaacggcgtcggctcgcgcgccgagctccgcagggacggctcgctggtgctgcaggactacgacggccgcgtcgtgtggagcaccaacaccagcggcacgccggccgaccgcgcccagctcctcgacaccggcaacctcgtcgtcgccgacgccgccgggaaccggctgtggcagagcttcgactggcccacggacacgctccttgccgggcagcccgtcacgcggtacaagcagctggtgtcggcgtcggcgaggggcttgccgtactccggctactacaagttctacttcgacagcagcaacatcctcaacctgatgtacgacgggccggagatcagcagcaactactggccgtcgccgttcaacaagtggtgggacaacaaccggacggcgtacaacagcagccggtacggcagcttcgacaggcgcggcgtcttcacggcgagcgaccagctgcagttcaacgcctccgacatgggcgacgagggcgtcatgcggcggctcacgctcgactacgacggcaacctccgcctctacagcctcgacgccgccgccgggcgctggcacgtcacgtgggtcgccgtcgggaggcagtgctacgtgcacgggctgtgcggcagcaacggcatctgctcgttccgtcccgggccgacgtgctcctgccccgtcggctacgtgcccaacgacgcgagcgactggagcaagggctgccggcgctcgcccgacgtccggtgcggcggcgacgacgtcgtcgacttcgtggagatgccgcacaccgacttctggggcttcgacgtcaactacaccgccggcgtcacgttcgacgcgtgccggcggctctgcctcgacgactgcaactgcaaggcgttcgggtacaggccgggcaccggcaggtgctaccccaagatcgctctctggaacggccggattccgatcaagcccgaccaaaccatctacctcaaagtcgctaggagtgtcaagaaccagatgatcaaccagtcgtcgtcatttctgcacttcgatggacacgcctgcaccgtggacgaacgggacgctagcgtcggcagctcgtacctgcatggcaggagcaacgagataaacttcatctacttctacagcttcctcgcggtcgtgttcgtcgtggaggccattttcgtcgtcgtgggttacctgtttgtcttccgagctgacccggtggcggcaggacgggtccgtgacgacgggtacagcttggtgttcagccatttccggaggttcacctacgacgagctgtcagacgcgacgtgcgggttcagagacgagattgccaagggcgggacgggatccgtgtacaagggcgttcttgaggatggccggagcatcgccgtgaagcggctgggagagctgacgcaagccgacgaggtgttccggtcggagctgagcgtcatcgggcggatcaaccacatgaacctcgtcaggatatggggcttctgctcggagcacccgcaccgcctcctcgtctccgagttcgtcgagaacggctcgctcgacaaggccctcttctgcgacgacggcgagagctccggtgtggtggtgttaccatggcggtcgaggtacaagatcgccgtgggcgtcgcgaaggcgcttgcgtacctccaccacgagtgcctggagtggatcgtgcactgcgacgtgaagccggagaacatcctgctcgacggcgacttcgagcccaaggtgacggacttcggcctcgtcaagctgctgagccgcgacgccggcagccacatggcgctgtcgcgggtgcaggggaccagaggctacattgcgccggagtgctggacggtgggccgcccgatcaccggcaaggccgacgtgtacagcttcggcgtcgtgctcctcgagctgctcagggggcagagggtgtgcgactgggtggcggcggcggacggggcctgggatctccagcggctggccgcgtggctcaaggagaagctgaagcgcgacgacgacgaggaggaggtgtcaacgtggctggaggagctcgtggatgcacggctgcgcggtgatttcaaccatgtgcaggcggccgcgatgctggagctggcagtttgttgcgtggacggtgaaccaaacaggaggccgagcatgaacgccgttgcgcagaagctcctctcgctgcatgatactcgctag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0655000, RefSeq:Os04g0655000

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os04g0655000&oldid=17398"