Os04g0661200

From RiceWiki
Revision as of 11:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0661200| Description = Protein of unknown function DUF941 family protein| Version = NM_001060682.1 GI:115461093 GeneID:4337286| Length = 42...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0661200

Description

Protein of unknown function DUF941 family protein

Version

NM_001060682.1 GI:115461093 GeneID:4337286

Length

4234 bp

Definition

Oryza sativa Japonica Group Os04g0661200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34133671..34137904

Sequence Coding Region

34134016..34134162,34134307..34134894,34135134..34135244,34135321..34135361,34135974..34136118
,34136314..34136517,34137362..34137463

Expression

GEO Profiles:Os04g0661200

Genome Context

<gbrowseImage1> name=NC_008397:34133671..34137904 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34133671..34137904 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtggttctgcatgagggggatgccaaagattgggtttacaaaggagaaggtgcagcgaatctaatcctcagctacactggctcgtcaccttctatgcttggcaaggttctgcgagtcaaaaagattctaaaagacaagggacaaccggcaccaaactgtatagtcttctcaagtcatgaggaacatctgtggggcaagatcccaggattgttggaatctgttaaaaatgattgcttgccacaagcctatgctacaattgttatgagccaacatttgggtgccaatcatgttgatggcggggtccgtgtacgtgtgtctaagaactttttcgagcttgctggaaagaatgtgcttgacaaccgtcctgcatggagagtgaatgctagtgcaattgatgctggagctgattctgctcttctaatttctgaccacacattattttccggtaatcctagaggaagcagttgcatagcagtggagataaaggcaaaatgtggatttcttccgtcatctgaatacatatcgaaggagaattctatcaagaaacaagtaacacggtataagatgcatcagcacctaaaatttcatctgggagagatatcgaagacaagtgaatacgatcccctagatttattttctggatcaaaagaaagaatacatatggctatcaagtcatttttttcaactcctcagaacaactttagaatttttgtggatggttctttagtttttggtggcatgggaggtggcgcagatagtgttcatcctaatgaaacagagaaatgtcttgaagatctgagcaaggttactggcttacaactatctgactttattgagctcctgtcagaggcaatctttaagtctggagtgttgggtaaacttttagccactcaaaaactggatgatcatgacatcgaaggggcgattcatctgtactataacatcatttctcagccttgtttggtatgcaaaagtataactgatacagaacttctgcgcaagtactccaccttgcattctcttccattggacaagagtgagaagattgtcagggactttcttatctctgctactgcaaaagattgtagcctaatgatcagctttcgaccaagacagagtggaacaacagattctgagtacgattctgtatttcttgattcagtgaaccaaagctatgattacaaggcatattttattgatctggatgtgaaacccttggataagatggtacattactttaaattggatcaaaagatagtcaatttctacactagaaatggagaagttgggggagatccacgtgatcctccaaagggatgtggccctaggtga</cdnaseq>

Protein Sequence

<aaseq>MEVVLHEGDAKDWVYKGEGAANLILSYTGSSPSMLGKVLRVKKI LKDKGQPAPNCIVFSSHEEHLWGKIPGLLESVKNDCLPQAYATIVMSQHLGANHVDGG VRVRVSKNFFELAGKNVLDNRPAWRVNASAIDAGADSALLISDHTLFSGNPRGSSCIA VEIKAKCGFLPSSEYISKENSIKKQVTRYKMHQHLKFHLGEISKTSEYDPLDLFSGSK ERIHMAIKSFFSTPQNNFRIFVDGSLVFGGMGGGADSVHPNETEKCLEDLSKVTGLQL SDFIELLSEAIFKSGVLGKLLATQKLDDHDIEGAIHLYYNIISQPCLVCKSITDTELL RKYSTLHSLPLDKSEKIVRDFLISATAKDCSLMISFRPRQSGTTDSEYDSVFLDSVNQ SYDYKAYFIDLDVKPLDKMVHYFKLDQKIVNFYTRNGEVGGDPRDPPKGCGPR</aaseq>

Gene Sequence

<dnaseqindica>3743..3889#3011..3598#2661..2771#2544..2584#1787..1931#1388..1591#442..543#cgctttcctcatcgtcggctccacttccacttcctcttcctcctcctcgaggacgaggaggaaattggcagctggaggcttggagcgcgctgcatcatcccgcccgccctgctgctgcggcgatcgccggagcagggctgcaggggatccccacggccgcagcagctgttgttatctggtaagcaactaaagctcgctatctgctcgacggaatgccgcaccgaccaggaaccaagtgttgcttctttctcgcttgatcttctctttggtagatgagtaaatgaatgcacctgcacttggactcgagtttgctgtgttactcggcgttaagcagcaattttctgttcctcctacttcgtttttcgcctactattcctccttacttattttgaataatagaccttgaactcatacttggaagcctgcagattctgtgtggggatggaggtggttctgcatgagggggatgccaaagattgggtttacaaaggagaaggtgcagcgaatctaatcctcagctacactggctcgtcaccttctatggtatgcatcgaataggttctgcttgtgtcattattggttactgacctatagtctcccgtaaatcggcgaatttgatgcatgtgcttcaagaaggatgttttacttttgatgttctgatgattatagctatgaatgtttgggtgtctgggaggcgacagtagttcaagctcttttcatgagatgttttggatggtgttttatgaggtgatctggagatgtagccttgtgcttgatctagctaggacccagcagttggtgtctagtcgtttctgtcctagtttagctagctgtttttattttcctataagactctgtttgtttggctttcctcacaaagccggtttaatgaatgcctgatttccccccaaaaagatgttttaccaactttgatgcaacgcccagggatgcatgtcctatggccagagctgcactcttgaaatggcaaatgtttgtatatgtaaattagaaaatcccatacagctttcatgtagtcaaatagtttcactttaatattatataattcaaaagaaaataatcttagttgtgtgatcacacaaaaagaaggggtggtggcggcgccatcttagttgtgtgatctgcctgcccggtctagttttgtttttttgttcaattccttttgctgtattgctacaacattgttgtttcctgtaatggaaagagggagagcaaggttcttctgttttttaaaagaagagaggaaaaagagaaaataatcttatcttgacttggttgactaaaatttttagtttgtgaccaaagtattatgtttccctcgtatgatatgtttacaggaaaaatgttttgatgatgttttcttgaacagcttggcaaggttctgcgagtcaaaaagattctaaaagacaagggacaaccggcaccaaactgtatagtcttctcaagtcatgaggaacatctgtggggcaagatcccaggattgttggaatctgttaaaaatgattgcttgccacaagcctatgctacaattgttatgagccaacatttgggtgccaatcatgttgatggcggggtatgttttaaatccaattatttaatgttgttacggtgatatttattagaaataaatcaaccaacgttttccaatttaaaattcttttgctctataattaatggaaaattcgggttatttgaaaatacatccttgattagataattggatccacttgactaaaatgaataaacgtggtctctttttcatgttcaggtccgtgtacgtgtgtctaagaactttttcgagcttgctggaaagaatgtgcttgacaaccgtcctgcatggagagtgaatgctagtgcaattgatgctggagctgattctgctcttctaatttctgaccacacattattttccggtaaagtcttggcgtttcaatgttatttgaacgcttcatctctttcccttttgagtataatgtgactcttgtttgtactaagaaagagcaaatatcagttaggtctggtgatctattaactctttatgatataacatttgcagcaacactgttactcagtttattatttctatttgcatcacatgctttaaccttatttgtttgttaagagtggcaagtttgtaatttatggttttctagtctacaaccaaatagataggatcaagattggtaagcccaactttctccatgacacttgtgaaacttgggatatgtttggaaggattcatacaatttatatttctcaagattctccattattctgaaacatggaaagaatgaaagaacctgcttgttttttcgaatttctagcttaactctgatctgttccatccgcaagagcttgtttccgtcctaaaattggtagttggtccaaaattgattagtttgaatgattaaagatgattcggtagttttttacattgcgccattgctaaattattattcgtaactcgctgctagattttgttttttaacactatgtttgtttttggtaatttttctaaacctcaggtaatcctagaggaagcagttgcatagcagtggagataaaggtacattttgagctttatttatttcttcactgttcatcttttgtacacatttcttttaacatgctttgccttccaggcaaaatgtggatttcttccgtcatctgaatacatatcgaaggagaattctatcaagaaacaagtaacacggtataagatgcatcagcacctaaaatttcatctgggagaggtatgttggttttgggtaccagattttgatttcaccgcagccataattttgagtactaaatatataatagcacactactcttttgctcactgaaagacaacaaactactcttctagctgaaacagatattaatagatgcttcatattcattctgtcactcttggaagttgcaatgctatatcatcccttttgcttttcaaatcagcttggttctaaacatatttttaaacacatttcagatatcgaagacaagtgaatacgatcccctagatttattttctggatcaaaagaaagaatacatatggctatcaagtcatttttttcaactcctcagaacaactttagaatttttgtggatggttctttagtttttggtggcatgggaggtggcgcagatagtgttcatcctaatgaaacagagaaatgtcttgaagatctgagcaaggttactggcttacaactatctgactttattgagctcctgtcagaggcaatctttaagtctggagtgttgggtaaacttttagccactcaaaaactggatgatcatgacatcgaaggggcgattcatctgtactataacatcatttctcagccttgtttggtatgcaaaagtataactgatacagaacttctgcgcaagtactccaccttgcattctcttccattggacaagagtgagaagattgtcagggactttcttatctctgctactgcaaaagattgtagcctaatgatcagctttcgaccaagacagagtggaacaacagattctgagtacgattctgtatttcttgattcagtgaaccaaagctatgattacaaggtattgatgtgatatgtttcttgtttgagaagttcgataagtcatctagttccttgtggaacaattgtttttttctttctaaaaactctttttattaatgtttctttcccaccaacccattgatttgcacatttgttgttgcaggcatattttattgatctggatgtgaaacccttggataagatggtacattactttaaattggatcaaaagatagtcaatttctacactagaaatggagaagttgggggagatccacgtgatcctccaaagggatgtggccctaggtgacacaaaggttcagctccaaaggttcagctccaacattgacgaccttgaaatataaagggcataggacaagtgtctgttgtatcttggtgattgttgtgtttctacaagtgtgcatgtccaatgtgcaggttctcctcccttctagggaaaacgtgtaagagagtggtagttgttgtagtacatcctgtataccgtgtggtttgcctcagcagtaggccgaattttcagtagacaaacattaagaagagttaataaactgtatactgaggcatccacgtttaccttggaaatctatgataaattcccgtatactcagcttgctgtgaatctgtgatctgagttctg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0661200, RefSeq:Os04g0661200