Os04g0661900

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Revision as of 11:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0661900| Description = Similar to 26S proteasome subunit RPN8a| Version = NM_001060687.1 GI:115461103 GeneID:4337291| Length = 3662 bp| De...")
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Gene Name

Os04g0661900

Description

Similar to 26S proteasome subunit RPN8a

Version

NM_001060687.1 GI:115461103 GeneID:4337291

Length

3662 bp

Definition

Oryza sativa Japonica Group Os04g0661900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34175994..34179655

Sequence Coding Region

34177731..34177734,34177825..34177902,34178113..34178171,34178258..34178380,34178961..34179018
,34179119..34179204,34179300..34179371

Expression

GEO Profiles:Os04g0661900

Genome Context

<gbrowseImage1> name=NC_008397:34175994..34179655 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34175994..34179655 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agagaatgctactcaaaaacagtcaaaaggtgtttgttcatgttccttcagcaaatagctgcccacgaggttgaggaaatcggagttgagcatcttctgagggatgtcaaggacacaacaataagcacgcttgcgacagaggtaaccagcaagcttgcagccttgaaaggactggacgcaaggctcagggagatccgtgggtacttagatcttgtaattgaagggaagctcccactgaatcatgagattttgtaccacttgcaggatgtgtttaatctgctccccaatctcaatgtaaacgagcttattaaagcctttgcagttaaaacaaacgatatgatgttggtcatatacttgtcttctcttatccggagtgtcatcgcactccataacttgatcaataacaagatgctaaacaaggagcatgagaaagccgaggattcgaagccaaccgccatacctagtgctgctgggagctga</cdnaseq>

Protein Sequence

<aaseq>RECYSKTVKRCLFMFLQQIAAHEVEEIGVEHLLRDVKDTTISTL ATEVTSKLAALKGLDARLREIRGYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNEL IKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAEDSKPTAIPSAAGS</aaseq>

Gene Sequence

<dnaseqindica>1738..1741#1832..1909#2120..2178#2265..2387#2968..3025#3126..3211#3307..3378#accttccgcctccgcaagaaagaaagaaaaagaggggaagcaaagcgcagaggcggccgtcgcagcagcaacacaagtcaggggaggagagagaggccgcgccgccgcagatctgtggccgcgttagggtttcttcgccggaatcgagcgaggaagtaggagggagaggaggaggaggaggagggcgacgagtaggaggcggcggcggcggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggtgcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccgcaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaactcctacgccggtaaaccttcccccagtactagggtttgcgtgtctcggatcagcccccttctgtttccaagggatctgcgctgctagttcgccttagggttcgcgcaactggtggcggttgtgggtatagttagatctattggcgtgaattgcgttgaacctgcacaattagatctgtggagttctattccagtgacgatttactgtatttatagcatgctatggcacttggttttgcagtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatcataattaccacgaatcgatgttttccatgttcaagaggatcaacggtatgcagtttgcaagtcttccatttgtttgacctgccctgtgtaactgattgtgttgtactgacgagctgttcttcgtgtagccaaggagcatgttgttggctggtacagcaccggtccaaaactcagggagaacgacttggatatacacgcactattcaataagtatgtgatgtaccgaagctttatatcctgtattgttcatgaagttatattcttgactagatatgttgttttggtgcaagtaatctttattaaattgtctggcacccaagttataaagcactgtagacttttcagcttgctagtataacagaaggaactgttttatatataacctagattcaattgctgtttgacttcctactgttaacatgagagcaagtcgaatgttgtctgtgcataaaactgtggccctactgcactggactgtaagctcctcagaagtgcatagctagtcccgcatcatagataacaccttttatctttcccccctttttttctttcttgctggaaccttatctgctaccctggccgatggaaatttcctgatcagttttggttacgaacataatgaactgatatgaacagcttggtgctaactaaagcatcatcctaactaaaagcagttttgtagttaatttgttccctcaaattaatttatgtgtttggaaagtcattcgcacatattggtggcatgggagtttaataggtgatgtgaggatacctgaaacattaccttctgtatctttttattaagtgtgcttgtaatttttgttaatgaaagtggaagtagtttccccccttcaaagtattttttttcctttttgtttttgtccctggatgcttgtgccatatttatgtttggtgcttacccttcatagtagctaacttagttcttgtgcttctcaattgtagctatgttcctcaaccctgtcctggtgattattgaatgttcaacccaaggagttaggaatacccaccaaagcatactatgctgtggcaggaggttaaagaggttagcatgtgatctcaagaagctggcaggtttattgtgcttgtccattgtcttgttctgtttcattaatgtacatgttgtcttttacagaatgctactcaaaaacagtcaaaaggtgtttgttcatgttccttcagcaaatagctgcccacgaggttgaggaaatcggtatgtctgtctcatctgtttttactaggaaaaagggatgctttatgtattttgcaagttacagataatagttagcttgtttgagcggtaaatatattaagttgttgatgctagtgaggtttcttcaccaagaggaaagaatatttttgtggtgaagtctttttccttcagaaaggattgttgactgatgtatgttcatcctacttataggagttgagcatcttctgagggatgtcaaggacacaacaataagcacgcttgcgacagaggtaatatttcacaagaatatgcattttcagcctacaagttgctttattatgccctaatatatcctttatcattgttgtcattaaaggtaaccagcaagcttgcagccttgaaaggactggacgcaaggctcagggagatccgtgggtacttagatcttgtaattgaagggaagctcccactgaatcatgagattttgtaccacttgcaggttcgccttctactcattgctttctgtatggtattcttaggagttacatatacctcccaattctcttgcatttgctatattattgaggtcagcacttgaaagctatctcatgctaccgccgtttggttttatggaatatttgtgcctttgagatatacacctccattattgtggttgttcggaattcagtatcactaaatatcactcccaaatcaaataaaaaaagtgcttaaaagttgcttacaaagtggaatatgctgccactggtaattccctgtgatgctactggtagttttcacaatacattggacgcgagatataagggatcttttggatggccaaatttgttttatgtatgttttttatgatttgttggttttttgtctaatatttttactcagctggtcactaccttaataagaaaactgtgacacaacatgtctaaaaaaactaatgaaggtcatgacagtttactacatgtaacttgccaaacaaaatttaaatataattcaaagttctgttgctgaaacaattttactgatgcagttaataacctgtttattttttaaaaaaatcacaggatgtgtttaatctgctccccaatctcaatgtaaacgagcttattaaagcctttgcaggtaataacacatgttctcaccaatttactataattgagctgaacctgtcgtctgggtttcttatcttaaaatggttcgatgctaatgttctttcctgcagttaaaacaaacgatatgatgttggtcatatacttgtcttctcttatccggagtgtcatcgcactccataacttgatcaataacaaggtaaattgtttctgtcttatctattgaatatagaagatgcgggagttaggagatacttgtcatttattgtaagacttccttttatttgattccagatgctaaacaaggagcatgagaaagccgaggattcgaagccaaccgccatacctagtgctgctgggagctgaatgtgctttatttgccttagattttggacccagtggaagccaaaagaattgtgacatgttagcatgatggcgtttgaaccaattgtctttgaccttggttttacactttcgatgtttatttcatgtacgataaggtcaacggcaaactttacattctgtgagcttaggtcatactacctcttgagctttcatcttgatcttatatacaatgtttcatggggtgcatcatgttttgtgatgcggattgtcgtacgattaacttctagtaaatgtttacttgacgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0661900, RefSeq:Os04g0661900